Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq3059 111 1e-19
seq3224 102 6e-17
seq8977 95.1 1e-14
seq9927 93.3 3e-14
seq226 93.3 3e-14
seq4679 91.5 1e-13
seq1260 91.5 1e-13
seq10551 89.7 4e-13
seq5974 89.7 4e-13
seq1833 89.7 4e-13
seq14711 86.0 5e-12
seq14362 86.0 5e-12
seq11709 86.0 5e-12
seq8995 86.0 5e-12
seq7474 86.0 5e-12
seq3967 86.0 5e-12
seq6038 84.2 2e-11
seq3410 84.2 2e-11
seq10 84.2 2e-11
seq12554 82.4 6e-11
>seq3059
Length=143113
Score = 111 bits (122), Expect = 1e-19
Identities = 169/237 (71%), Gaps = 3/237 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || ||||||||||| || || || ||||| |||||| |||| |||| ||| |
Sbjct 1976 ATGCAGATATTTGTCAAAACCTTGACGGGAAAAACAATTACCCTCGAGGTGGAGAGCTCG 1917
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| ||| | | || || || ||| ||||||||||| | || ||||||
Sbjct 1916 -GATACGATCGACAACGTGAAGGCTAAAATTCAGGATAAAGAAGGGATCCCTCCGGATCA 1858
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| | || | || || || ||||||||||||| || ||| | || || |||||
Sbjct 1857 ACAGAGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCAGGACACTTGCAGATTACAA 1798
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGG-GGGAAATAATA 107790
|| || || |||||||| | ||| | ||| |||| | || || |||| || |||
Sbjct 1797 TATCCAGAAAGAGTCTACTCTCCACCTTGTGCTGAGGCTTCGTGGAGGGATATGATA 1741
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGCTGG 107614
||||| || || |||||||| |||| ||||| || || || | ||| || | |||
Sbjct 2432 ATGCAGATATTCGTCAAAACCCTAACCGGCAAGACAATCACTCTTGAAGTCGAAAGCTC- 2374
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || | | | || ||| |||||| |||||||||||| | || ||||||
Sbjct 2373 CGACACCATAGATAATGTCAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCGGATCA 2314
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | | || | || || || ||||||||||||| | ||| | || || || ||
Sbjct 2313 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACACTCGCCGATTATAA 2254
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
||| || |||||||| || |||| ||||
Sbjct 2253 CATCCAGAAGGAGTCGACTCTGCATCTGGT 2224
>seq3224
Length=148195
Score = 102 bits (112), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || ||||| ||||| | |||||||| || || ||| | || |||| |||
Sbjct 66827 ATGCAGATCTTTGTGAAAACCCTTACAGGCAAGACAATCACCCTTGAGGTGGAGAGCTC- 66885
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| ||| | | | || ||| |||||| || || || ||| | || |||| ||
Sbjct 66886 CGACACTATTGATAATGTGAAAGCTAAGATTCAGGACAAGGAGGGCATACCACTGGACCA 66945
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| | |||| ||| || |||||||| || || | || || | || || |||||
Sbjct 66946 GCAGAGGTTAATTTTTGCTGGGAAACAGCTTGAAGATGGCAGGACCCTAGCAGATTACAA 67005
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||||||||| | ||| |||||||| | | ||||| ||
Sbjct 67006 TATTCAGAAGGAGTCTACTCTCCACTTGGTGTTGCGTCTCCGAGGTGG 67053
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || ||||| ||||| | || ||||| || || ||| | || |||| |||
Sbjct 66599 ATGCAGATCTTTGTGAAAACCCTTACGGGCAAGACAATCACCCTTGAGGTGGAGAGCTC- 66657
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| ||| ||| | || || ||||| || || || ||| | || || ||
Sbjct 66658 CGACACTATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATACCACCAGACCA 66717
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| ||||| | ||| || ||||| || ||||| | ||| | || || |||||
Sbjct 66718 GCAGAGGCTTATCTTTGCTGGGAAACAACTTGAGGATGGTCGTACACTTGCTGATTACAA 66777
Query 107735 CATTCAAAAGGAGTCTACGTTGCAC 107759
|||||| || |||||||||||||||
Sbjct 66778 CATTCAGAAAGAGTCTACGTTGCAC 66802
>seq8977
Length=60439
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| ||||||||||| | || || || || |||||| |||| ||| |
Sbjct 30355 ATGCAAATCTTTGTCAAAACCCTGACTGGGAAGACTATTACCCTCGAGGTTGAGAGTTCT 30296
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | ||||| ||||||| || | ||| | | || ||||||
Sbjct 30295 GACACCATCGACAACGTAAAGGCAAAGATTCAAGACTAGGAAAGGATCCCACCTGATCAG 30236
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| || ||||||| ||| || ||||||||||| || | | || | || || ||||||
Sbjct 30235 CAAAGGCTTATTTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTAGCTGATTACAAC 30176
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||||||||||| ||||| | ||| | |||
Sbjct 30175 ATTCAAAAGGAATCTACCCTCCACCTAGTG 30146
>seq9927
Length=49610
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
|||||||| ||||| || ||| | || ||||| | ||| ||| |||| |||| |||
Sbjct 14206 ATGCAAATCTTTGTAAAGACTCTTACTGGCAAGATCATCACCCTCGAGGTGGAGAGCTCT 14147
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| | | | | || || ||||| || || || ||| | || |||||
Sbjct 14146 -GACACTATTGACAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGATCA 14088
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| ||||| | |||||||||||| || ||||| | || ||| | || ||||||||
Sbjct 14087 TCAGAGGCTTATCTTTGCGGGTAAACAACTTGAGGATGGCAGAACCCTTGCTGACTACAA 14028
Query 107735 CATTCAAAAGGAGTCTAC 107752
||| || || ||||||||
Sbjct 14027 CATCCAGAAAGAGTCTAC 14010
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| ||||| | || || |||||||| || | || |||| |
Sbjct 13978 ATGCAGATCTTTGTGAAAACACTCACTGGAAAAACCATCACTTTGGAGGTGGAGAGTTCT 13919
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || |||||| || || || ||| | || ||| |||
Sbjct 13918 GATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAGGAGGGCATCCCACAGGACCAG 13859
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| ||| || |||||||| || || | || || | || ||||| |||
Sbjct 13858 CAGAGGTTGATTTTTGCTGGGAAACAGCTTGAAGATGGCAGGACTCTCGCAGACTATAAC 13799
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
||||||||||||||||| | ||| ||||||||
Sbjct 13798 ATTCAAAAGGAGTCTACCCTCCACTTGGTGTTG 13766
>seq226
Length=390889
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || ||||| |||||| | || ||||| || || ||| | || |||| |||
Sbjct 303537 ATGCAGATCTTTGTGAAAACTCTTACTGGCAAGACAATCACCCTTGAGGTGGAGAGCTC- 303595
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || | | | || || |||||| || || || ||| | || ||| ||
Sbjct 303596 CGACACAATTGATAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCACCGGACCA 303655
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| | |||| ||| || |||||||| || || | || || | || ||||| ||
Sbjct 303656 GCAGAGGTTAATTTTTGCTGGGAAACAGCTTGAAGATGGCAGGACCCTAGCAGACTATAA 303715
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||||||||||||| | || |||||||| | | ||||| ||
Sbjct 303716 CATTCAAAAGGAGTCTACCCTCCATTTGGTGTTGCGTCTCCGAGGTGG 303763
>seq4679
Length=107372
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||||||||| || || | || || || |||||||| | || |||| |
Sbjct 38031 ATGCAAATTTTTGTTAAGACCCTCACCGGAAAGACCATTACATTGGAGGTGGAGAGTTCA 37972
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | | ||||| ||||||| || || || || | ||| || |||
Sbjct 37971 GATACCATTGACAATGTAAAGGCAAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAG 37912
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| ||| ||||| || ||||| || | | ||| |||| ||||| |||
Sbjct 37911 CAGAGGTTGATTTTTGCTGGTAAGCAACTGGAAGATGGCCGCACATTGGCCGACTATAAC 37852
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || | ||| |||||
Sbjct 37851 ATCCAGAAGGAGTCCACCCTCCACTTGGTG 37822
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| ||||| || || | || || || |||||||| | || |||| |
Sbjct 39302 ATGCAAATCTTTGTTAAGACCCTCACCGGAAAGACCATTACATTGGAGGTGGAGAGTTCA 39243
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | | || || ||||||| || || ||||| | ||| || |||
Sbjct 39242 GATACAATTGACAATGTCAAGGCAAAGATTCAGGACAAGGAAGGTATCCCCCCAGACCAG 39183
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| ||| ||||| || || ||||| | | || |||| ||||| |||
Sbjct 39182 CAGAGGTTGATTTTTGCTGGTAAGCAACTAGAGGATGGCCGCACCTTGGCTGACTATAAC 39123
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| ||||||||||| || | || |||||
Sbjct 39122 ATCCAAAAGGAGTCCACCCTCCATCTGGTG 39093
>seq1260
Length=223926
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||||||||| || || | || || || |||||||| | || |||| |
Sbjct 116257 ATGCAAATTTTTGTTAAGACCCTCACCGGAAAGACCATTACATTGGAGGTGGAGAGTTCA 116316
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | | ||||| ||||||| || || || || | ||| || |||
Sbjct 116317 GATACCATTGACAATGTAAAGGCAAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAG 116376
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | |||| ||| ||||| || ||||| || | | ||| |||| ||||| |||
Sbjct 116377 CAGAGGTTGATTTTTGCTGGTAAGCAACTGGAAGATGGCCGCACATTGGCCGACTATAAC 116436
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || | ||| |||||
Sbjct 116437 ATCCAGAAGGAGTCCACCCTCCACTTGGTG 116466
>seq10551
Length=45279
Score = 89.7 bits (98), Expect = 4e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || ||||| || ||| | || ||||| ||||| ||| |||| |||| |||
Sbjct 34813 ATGCAGATCTTTGTGAAGACTCTTACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 34872
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| | | | | || || ||||| ||||| || ||| | || |||||
Sbjct 34873 -GACACTATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCACCAGATCA 34931
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| || || | |||||||||||| || ||||| | || ||| | || ||||||||
Sbjct 34932 GCAGAGGCTAATCTTTGCGGGTAAACAACTTGAGGATGGCAGAACCCTTGCTGACTACAA 34991
Query 107735 CATTCAAAAGGAGTCTAC 107752
||| || || || || ||
Sbjct 34992 CATCCAGAAAGAATCAAC 35009
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
|||||||| || |||||||| | || ||||| ||||| ||| | || ||| |||
Sbjct 29351 ATGCAAATCTTCGTCAAAACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTC- 29409
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || | | | || || ||||| || || ||||| | || || ||
Sbjct 29410 CGACACCATTGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCAGACCA 29469
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| ||||| | ||| || |||||||||||||| | | || | |||||||||||
Sbjct 29470 ACAGAGGCTTATCTTTGCTGGAAAACAGCTGGAGGATGGCCGTACTCTTGCGGACTACAA 29529
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|||||| |||||||| ||| | ||| ||||
Sbjct 29530 CATTCAGAAGGAGTCCACGCTCCACTTGGT 29559
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613
|||||| |||||||| |||||||| || || || |||||||| | || |||| |||
Sbjct 35268 AATGCAGATTTTTGTGAAAACTTTGACCGGTAAGACCATTACATTGGAGGTGGAGAGCTC 35327
Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
|| || | | | | || || ||||| ||||| || ||| | || || |
Sbjct 35328 T-GACACAATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATACCACCTGACC 35386
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
||||||| | |||| ||| || || ||||| ||||| | | || | || || || |
Sbjct 35387 AGCAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACTCTTGCCGATTATA 35446
Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|||||||||||||||| || ||||| |||| |||
Sbjct 35447 ACATTCAAAAGGAGTCAACTCTGCACTTGGTTTTG 35481
>seq5974
Length=88138
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| || ||||| | || || || ||||| ||| |||| ||| |
Sbjct 73096 ATGCAAATTTTCGTTAAAACACTCACTGGTAAGACCATCACCCTCGAGGTGGAAAGTTCT 73037
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | ||||| |||||| || || ||||| | || || ||
Sbjct 73036 GATACCATCGACAATGTAAAGGCCAAGATTCAAGACAAGGAAGGAATCCCACCAGACCAA 72977
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||| | || | ||| ||||||||||||||||| | | || | || ||||| |||
Sbjct 72976 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGTACTCTTGCCGACTATAAC 72917
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|| || ||||| || || | ||| |||| | | ||| |||| ||||
Sbjct 72916 ATCCAGAAGGAATCCACACTCCACTTGGTCCTTCGTTTGAGAGGTGGAA 72868
>seq1833
Length=187927
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
|||||||| || |||||||| | || || |||||||| ||| | ||| ||| |||
Sbjct 43708 ATGCAAATCTTCGTCAAAACCCTGACCGGTAAAACCATAACCTTGGAAGTCGAGAGCTC- 43650
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || ||| | | || || ||||| || || || ||| | || ||||||
Sbjct 43649 CGACACGATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCGGATCA 43590
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| || || | ||| || || ||||| ||||||| | || |||| || |||||
Sbjct 43589 GCAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCTTGGCCGATTACAA 43530
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770
||| || ||||| || || | || |||| |||||
Sbjct 43529 CATCCAGAAGGAATCGACCCTTCATCTGGTTTTGAG 43494
>seq14711
Length=21231
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| ||||| ||||| | || ||||| ||||| ||| | || |||| |
Sbjct 4385 ATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGAGTTCG 4444
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || || |||||| || || ||||| | || || ||
Sbjct 4445 GACACCATTGACAATGTGAAGGCAAAGATCCAAGACAAGGAAGGAATACCACCAGACCAA 4504
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| ||||||| ||| || || || || || || | | || |||| |||||||||
Sbjct 4505 CAGAGGCTTATTTTTGCTGGCAAGCAACTTGAAGATGGCCGCTCACTGGCTGACTACAAC 4564
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || || ||||| ||| | ||| ||||| | ||| | ||||| ||
Sbjct 4565 ATCCAGAAAGAGTCCACGCTCCACCTGGTGCTTAGACTTCGAGGTGG 4611
>seq14362
Length=23126
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
|||||||| ||||| || || | || ||||| ||||| ||| |||| ||| |||
Sbjct 17309 ATGCAAATCTTTGTTAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTC- 17251
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || | | | || || |||||| || || ||||| | ||| || ||
Sbjct 17250 CGACACCATTGATAACGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCCCCAGACCA 17191
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||||| | || | ||| |||||||| || ||||| | | || |||| ||||||||
Sbjct 17190 GCAGAGATTGATCTTTGCCGGTAAACAACTCGAGGATGGCCGCACCTTGGCTGACTACAA 17131
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||| |||||||| || || | ||| |||||
Sbjct 17130 CATCCAAAAGGAATCCACCCTTCACTTGGTG 17100
>seq11709
Length=37133
Score = 86.0 bits (94), Expect = 5e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || || |||||||| | || ||||||||||| ||| | ||| ||| |||
Sbjct 7974 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAAACCATAACCTTGGAAGTCGAGAGCT-C 7916
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || ||| | | || || ||||| || || ||||| | || ||| ||
Sbjct 7915 CGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCACCGGACCA 7856
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| || || | || || |||||||| ||||||| | || |||| || |||||
Sbjct 7855 GCAGAGGCTCATATTCGCCGGAAAACAGCTCGAGGACGGCCGGACTTTGGCCGATTACAA 7796
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770
||| || ||||| || || | || |||| |||||
Sbjct 7795 CATCCAGAAGGAATCGACCCTTCATCTGGTTTTGAG 7760
>seq8995
Length=56531
Score = 86.0 bits (94), Expect = 5e-12
Identities = 164/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| ||||| |||||||| || ||||| ||||| |||||| | || ||| ||| |
Sbjct 47868 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAAACAATTACCCTGGAGGTAGAGAGCTCG 47927
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | | || || || ||| || |||||||| | || || ||
Sbjct 47928 -GATACGATTGACAACGTGAAGGCTAAAATTCAGGACAAAGAAGGGATCCCACCGGGCCA 47986
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| | || | || || || ||||||||||||| || || | ||||| |||||
Sbjct 47987 ACAGAGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCAGGACCCTTGCGGATTACAA 48046
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAG--GGGGAAATAATA 107790
|| || || |||||||| | ||| | ||| |||| | || | ||||| || |||
Sbjct 48047 TATCCAGAAAGAGTCTACTCTCCACCTTGTGCTGAGGCTTCGTGGTGGGGATATGATA 48104
>seq7474
Length=135391
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| ||||| ||||| | || ||||| ||||| ||| | || |||| |
Sbjct 126222 ATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGAGTTCG 126281
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || || |||||| || || ||||| | || || ||
Sbjct 126282 GACACCATTGACAATGTGAAGGCAAAGATCCAAGACAAGGAAGGAATACCACCAGACCAA 126341
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| ||||||| ||| || || || || || || | | || |||| |||||||||
Sbjct 126342 CAGAGGCTTATTTTTGCTGGCAAGCAACTTGAAGATGGCCGCTCACTGGCTGACTACAAC 126401
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || || ||||| ||| | ||| ||||| | ||| | ||||| ||
Sbjct 126402 ATCCAGAAAGAGTCCACGCTCCACCTGGTGCTTAGACTTCGAGGTGG 126448
>seq3967
Length=121343
Score = 86.0 bits (94), Expect = 5e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
|||||||| || || ||||| | || |||||||| || ||| | ||| ||| |||
Sbjct 66233 ATGCAAATCTTCGTGAAAACCCTGACCGGCAAAACAATCACCTTGGAAGTCGAGAGCTC- 66291
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || ||| | | || || ||||| || || ||||| | || ||| ||
Sbjct 66292 CGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCA 66351
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| | || || | || || |||||||| ||||||| | || |||| ||||||||
Sbjct 66352 GCAACGTCTCATCTTCGCTGGAAAACAGCTCGAGGACGGCCGTACCTTGGCTGACTACAA 66411
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770
||| ||||||||||| || | || |||| |||||
Sbjct 66412 CATCCAAAAGGAGTCGACCCTTCATTTGGTCTTGAG 66447
>seq6038
Length=86802
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || ||||| ||||| | || ||||| || || || | || |||| |||
Sbjct 71908 ATGCAGATCTTTGTGAAAACCCTTACCGGCAAGACAATCACTCTTGAGGTGGAGAGCTC- 71966
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || | | | || || |||||| || || || ||| | || ||| ||
Sbjct 71967 CGACACAATTGATAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCACCGGACCA 72026
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| | |||| ||| || |||||||| || || | | || | || ||||| ||
Sbjct 72027 GCAGAGGTTAATTTTTGCTGGGAAACAGCTTGAAGATGGTAGGACCCTAGCAGACTATAA 72086
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||||||||||||| | ||| |||||||| | | ||||| ||
Sbjct 72087 CATTCAAAAGGAGTCTACCCTCCACTTGGTGTTGCGTCTCCGAGGCGG 72134
>seq3410
Length=189534
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
|||||||||||||| || || | || || ||||| || ||| | || ||| ||| |
Sbjct 155087 ATGCAAATTTTTGTGAAGACCCTCACTGGGAAAACTATCACCCTAGAGGTTGAGAGCTCG 155028
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || || |||||| ||||| ||||| | ||| ||||||
Sbjct 155027 -GACACGATTGATAATGTCAAGGCCAAGATTCAGGATAAGGAAGGAATTCCCCCGGATCA 154969
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| | || | ||| || || ||||| || || | | || |||| ||||||||
Sbjct 154968 GCAGAGGTTGATCTTTGCTGGGAAGCAGCTTGAAGATGGGAGGACCCTGGCAGACTACAA 154909
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
||| || ||||| || || |||||| ||||
Sbjct 154908 CATCCAGAAGGAATCAACTTTGCACTTGGT 154879
>seq10
Length=577822
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || |||||||| || || ||||||||||| ||| |||| ||| | |
Sbjct 543187 ATGCAAATCTTCGTCAAAACCTTGACCGGCAAAACCATAACCCTCGAGGTCGAGAGTTCC 543128
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || || ||| || ||||||||| | || || |||
Sbjct 543127 GACACCATCGACAACGTTAAGGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAG 543068
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| | || || | || || ||||||||||| |||| | || ||||||| || ||
Sbjct 543067 CAACGCCTCATCTTCGCCGGCAAACAGCTGGAAGACGGCCGTACCTTGGCGGATTATAAT 543008
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|| || ||||| || || | ||| | || |||| | || || ||||
Sbjct 543007 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTGAGGCTTCGTGGAGGAA 542959
>seq12554
Length=32302
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/200 (70%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| |||||||| || |||||||| |||| || || ||||| ||| | || ||| ||
Sbjct 15393 AAGATGCAAATCTTCGTCAAAACCCTAACGGGTAAGACCATAACCCTAGAGGTTGAGTCT 15334
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||| ||| ||| | | || || |||||| || ||||||||| | || |||
Sbjct 15333 TCCGACACTATCGACAATGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCGGAC 15274
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||| | ||||| | || || || ||||| || |||| | | | | || ||||||
Sbjct 15273 CAGCAACGCCTTATCTTCGCCGGAAAGCAGCTCGAAGACGGCGCACCT-TAGCCGACTAC 15215
Query 107733 AACATTCAAAAGGAGTCTAC 107752
||||| || || ||||| ||
Sbjct 15214 AACATCCAGAAAGAGTCCAC 15195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398500106733232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |