Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq2693 280 2e-70
seq5102 210 2e-49
seq3550 190 2e-43
seq31365 187 3e-42
seq9889 183 3e-41
seq15646 176 5e-39
seq695 170 2e-37
seq369 163 3e-35
seq7993 136 4e-27
seq3386 120 3e-22
seq800 104 3e-17
seq7459 87.8 2e-12
seq197 87.8 2e-12
seq1921 84.2 2e-11
seq1349 84.2 2e-11
>seq2693
Length=259752
Score = 280 bits (310), Expect = 2e-70
Identities = 487/699 (70%), Gaps = 8/699 (1%)
Strand=Plus/Minus
Query 159090 TTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCG 159148
|||| ||||| ||||| ||| | || | |||||||| || || | || || | | ||
Sbjct 245625 TTTGGACTAATAGGTTTTATGTTACGTAAATTTGAACTTGCGCGATTTCTTCAAT-TGCG 245567
Query 159149 TCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTAT 159208
|| || ||||| || | ||||||||||| |||| ||||||||| || ||| | |
Sbjct 245566 ACCTTATAATGCAATCGTATTCTCTGGTCCAATTGTTGTTTTTGTTTCTGTATTCTTGGT 245507
Query 159209 CTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATATT 159268
|| ||||| |||||||| ||||||| || || || ||||| || || || |||||
Sbjct 245506 TTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCTATATT 245447
Query 159269 CAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATGAT 159328
|| ||| | ||||| | ||||| || || ||||||||| || || || ||||||||
Sbjct 245446 TAGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATCGAATCCATTTCATATGAT 245387
Query 159329 GGGAGTTG-CTG-GTATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGTT 159386
|||||||| ||| |||| | |||| || | |||| |||||||||| | || ||
Sbjct 245386 GGGAGTTGTCTGTGTAT--TGGGTGTGGCTTTGCTATGCGCTATTCATGATGCTACCGTA 245329
Query 159387 GAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACT 159446
|| | ||| |||| || ||||| || ||||| | ||| || ||| | |||||
Sbjct 245328 GAGATTACTTTATTTGAAGATGGTGATGGTGCAAATAAATTTCGTGCTTTTAACCCAACT 245269
Query 159447 CAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGC 159506
|||| || || |||||||| |||||| || |||||||| ||||| || ||||| ||
Sbjct 245268 CAAGCCGAAGAAACTTATTCAATGGTCGTCGCTAACCGCTTTTGGTCCCAAATCTTTGGG 245209
Query 159507 ATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGT 159566
|| ||||| || || || ||| | |||||||||||||| ||||| || | |||
Sbjct 245208 GTT-TTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAATAGCTGGT 245150
Query 159567 CTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTC 159626
||| || | |||| | | ||||| ||||| || || |||| || || |||
Sbjct 245149 TTATAGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGTCTATGACTTC 245090
Query 159627 GTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAAC 159686
|| || || || ||| ||||||| |||||| || ||||||| ||| ||
Sbjct 245089 GTTTCCCAGGAAATTTATGCAATGAAAGATCCCACATTTGAGACTTTCTACATCAAAAAT 245030
Query 159687 ATT-CTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 159745
||| || | || ||||| | | ||||||| |||| || ||||| || ||||||||
Sbjct 245029 ATTATTTTTAAACGAAGGTATTCCTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 244970
Query 159746 CTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
| || |||| || || |||||||| | || |||||
Sbjct 244969 ACTTATATTCCTTGAGGAGGTTCTACCCTGTGGAAACGC 244931
>seq5102
Length=101622
Score = 210 bits (232), Expect = 2e-49
Identities = 291/405 (72%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110
||||| | ||| |||| ||| | |||||| | || | || ||||| ||||| |
Sbjct 52337 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 52278
Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169
||||| || || || | | |||||| |||| || ||| | || ||| | || || ||
Sbjct 52277 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 52219
Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229
||| || ||||| || |||||||| ||||| ||| |||| ||||| | || || |||||
Sbjct 52218 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 52159
Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289
|| || |||||||| || ||||| |||| || || ||| | ||||| ||||| ||
Sbjct 52158 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGAT 52099
Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349
||||||||| ||||| ||||||| ||| | ||||| || ||||||| | | | ||
Sbjct 52098 CTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAATTGT 52039
Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409
|| |||||| | | || | | || ||||| ||||||||||||||| || |||
Sbjct 52038 TTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 51979
Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGT 157454
| | ||||||||||| |||||| |||||| || || || || ||
Sbjct 51978 TCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGT 51934
>seq3550
Length=137586
Score = 190 bits (210), Expect = 2e-43
Identities = 235/320 (73%), Gaps = 1/320 (0%)
Strand=Plus/Minus
Query 157718 TCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGA 157777
|||||||||| ||||| || || || ||||| ||||| || ||||| || || || |||
Sbjct 93203 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 93144
Query 157778 TCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGC 157837
|||| | || ||| |||||||| | | | || |||||| | || || | ||
Sbjct 93143 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 93084
Query 157838 CTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACG 157897
| || || || |||||||||||||| | || | ||||||||| | |||||||| || |
Sbjct 93083 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 93024
Query 157898 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 157957
||||||| || ||||| | | ||||| |||| |||||||| | || ||| |||| |
Sbjct 93023 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 92965
Query 157958 ATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 158017
|| | | |||| ||| |||||||||||||||||||||| | ||| || || ||||
Sbjct 92964 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 92905
Query 158018 TCCCACTGGATCTTGCTGCT 158037
|||| || || || ||||||
Sbjct 92904 TCCCTCTAGACCTAGCTGCT 92885
>seq31365
Length=1132
Score = 187 bits (206), Expect = 3e-42
Identities = 234/320 (73%), Gaps = 1/320 (0%)
Strand=Plus/Minus
Query 157718 TCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGA 157777
|||||||||| ||||| || || || ||||| ||||| || ||||| || | || |||
Sbjct 472 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGCCCGATTGA 413
Query 157778 TCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGC 157837
|||| | || ||| |||||||| | | | || |||||| | || || | ||
Sbjct 412 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 353
Query 157838 CTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACG 157897
| || || || |||||||||||||| | || | ||||||||| | |||||||| || |
Sbjct 352 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 293
Query 157898 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 157957
||||||| || ||||| | | ||||| |||| |||||||| | || ||| |||| |
Sbjct 292 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 234
Query 157958 ATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 158017
|| | | |||| ||| |||||||||||||||||||||| | ||| || || ||||
Sbjct 233 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 174
Query 158018 TCCCACTGGATCTTGCTGCT 158037
|||| || || || ||||||
Sbjct 173 TCCCTCTAGACCTAGCTGCT 154
>seq9889
Length=72821
Score = 183 bits (202), Expect = 3e-41
Identities = 291/411 (71%), Gaps = 6/411 (1%)
Strand=Plus/Plus
Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834
||||| || | || |||||| | |||| |||||||||||||| || ||||| ||
Sbjct 45036 TTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGC 45095
Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894
|| | || | || ||| ||| | ||| | || |||||| |||| || || || ||
Sbjct 45096 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTTACAGGTACAACCTTT 45155
Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTG-AGGGTGCAAACTTTCT 158953
| || |||||||| |||||| | || | ||||||| | | ||| ||||| |||||
Sbjct 45156 GTAACTTCGTGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCT 45213
Query 158954 T-ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGG 159012
| || || |||||||||||||| ||| || | | | |||||| | || | || ||||
Sbjct 45214 TAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGG 45273
Query 159013 GTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTG 159072
||||||| || ||||| ||||| | ||| ||| | || || || |||| ||||
Sbjct 45274 GTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACATTTG 45333
Query 159073 TGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 159132
| || |||||||| || || | ||||| ||||| ||| | || || |||||||| | |
Sbjct 45334 TTGCTCTCCACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGTGC 45393
Query 159133 G-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATT 159182
| ||| || | | || || || ||||| || || ||||||||||| |||
Sbjct 45394 GATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATT 45443
>seq15646
Length=30608
Score = 176 bits (194), Expect = 5e-39
Identities = 205/277 (74%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 159508 TTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTC 159567
|||| ||||| || || || ||| | |||||||||||||| ||||| || || | |||
Sbjct 24036 TTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 23977
Query 159568 TATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCG 159627
|||||| | |||| | | ||||| ||||| || || ||||| || || ||||
Sbjct 23976 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCG 23917
Query 159628 TGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAACA 159687
| || || ||| | ||||| |||||||| |||||||| || ||||||||||| || |
Sbjct 23916 TTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATA 23857
Query 159688 TTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACT 159747
||||| | || ||||| | ||||||||| |||| || ||||| || |||||||||
Sbjct 23856 TTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 23797
Query 159748 TCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
| || ||||| || || |||||||| | || |||||
Sbjct 23796 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 23760
Score = 165 bits (182), Expect = 9e-36
Identities = 260/366 (71%), Gaps = 6/366 (2%)
Strand=Plus/Minus
Query 158808 CGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTACCCACTGCTTATCTTGCTATT 158867
|||||||||||||| || ||||| || || | || | || ||| ||| | ||| |
Sbjct 24407 CGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTA 24348
Query 158868 GGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACT 158927
|| |||||| |||| || || || || | || |||||||| |||||| | || | |
Sbjct 24347 GGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGTGGTATACTCATGGATTGGCCAGT 24288
Query 158928 TCCTATCTTGAGGG-TGCAAACTTTCTTA-CAGCAGCAGTTTCGACTCCAGCTGATGCTA 158985
|||||| | || || ||||| ||||||| | || |||||||||||||| ||| || |
Sbjct 24287 TCCTATTTGGAAGGCTGCAA--TTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTT 24230
Query 158986 TGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGG 159045
| | |||||| | || | || ||||||||||| || ||||| ||||| | |||
Sbjct 24229 TAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGT 24170
Query 159046 TCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTT 159105
||| | || || || |||| ||||| || |||||||| || || | ||||| ||||
Sbjct 24169 GTCAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCACGGCGCTTTCGGACTAATAGGTT 24110
Query 159106 TCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATT 159164
| ||| | || || |||||||| || || ||| || | | || || || ||||| ||
Sbjct 24109 TTATGTTACGTCAATTTGAACTTGCGCGATCTGTTCAAT-TGCGACCTTATAATGCAATC 24051
Query 159165 GCGTTC 159170
|| |||
Sbjct 24050 GCATTC 24045
>seq695
Length=285002
Score = 170 bits (188), Expect = 2e-37
Identities = 321/471 (68%), Gaps = 1/471 (0%)
Strand=Plus/Minus
Query 157075 AACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTTATGATTCCAACATTGCTTGCAGCA 157134
|| || ||| | ||| | | ||||| | ||| | ||||| || || || | | |||
Sbjct 41120 AAAAATCGTCTTTATATCAGATGGTTTGTTGTTTTAATGATCCCTACCTTATTGACCGCA 41061
Query 157135 ACTATCTGCTTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGC 157194
||| | | || ||| | | || | || || | || | ||||| || ||||||||
Sbjct 41060 ACTTTTTTATTTATTATCGTCTTTATTGCTGCTCTTCTAATAGATATTGATGGTATTCGT 41001
Query 157195 GAACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCT 157254
||||| || |||| ||||| | || || ||||| || || ||||||| || ||| |
Sbjct 41000 GAACCTATTTCTGGATCTCTACTTTACGGAAACAAAATTATTTCTGGTGTCATTATTCTT 40941
Query 157255 TCTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAG 157314
|||| | || ||| | | ||| |||| ||||||||||| ||||| |||||||
Sbjct 40940 ACTTCTGTAGTTATTGGTTTGCTCTTTTACCAGATCTGGGAAGCGGCATCCGTTGATGAA 40881
Query 157315 TGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCTAT 157374
||| | ||||| || ||||||| | | | || || |||||| | | || | |
Sbjct 40880 TGG-TATACAATGGCGGTCCTTATGAGTTAATTGTTTTACACTTCTTACTTGGTGTAGCT 40822
Query 157375 GCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGT 157434
|| || || ||||||| ||||||| || || | ||||||||| ||| ||||| |
Sbjct 40821 TGTTACATAGGTCGTGAGTTGGAACTTAGTTTCCATCTAGGTATGCACCCTTGGATTGCT 40762
Query 157435 GTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGT 157494
|||| || || | || | || ||| | | | | || ||| | ||||||| |||||
Sbjct 40761 ATTGCATATTCAACTCCTATTGCAGCTACTACTACTGTTTTCTTGATCTATCCAATCGGT 40702
Query 157495 CAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAAC 157545
||||| ||| || |||| ||||||| | || ||||||| |||||| |||
Sbjct 40701 CAAGGGAATTTTTCTGATGGTATGCCTTTAGGAATCTCTGATACTTTCAAC 40651
>seq369
Length=444201
Score = 163 bits (180), Expect = 3e-35
Identities = 219/305 (72%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 159417 GCAAACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACT 159476
|||||||| ||| || ||| | ||||||||| || || |||||||| ||||||||
Sbjct 342766 GCAAACACATTTCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACC 342825
Query 159477 GCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCAT 159536
|| |||||||| ||||| || ||||| | |||| ||||| | || || ||| | |||
Sbjct 342826 GCTAACCGCTTTTGGTCCCAAATCTTTTGGGTTGCTTTTTCCATTAAACGTTGGTTACAT 342885
Query 159537 TTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGT 159596
||||||||||| ||||| || || | || |||||| | |||| | |||||
Sbjct 342886 TTCTTTATGTTATTTGTACCAGTAACCGGCTTATGGATGAGTGCTCTTGGAGTAGTTGGT 342945
Query 159597 CTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGAT 159656
|| ||||| || || ||||| | || ||||| || || ||| | ||||| ||||||
Sbjct 342946 CTGGCTCTTAACCTACGTGCCCATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGAT 343005
Query 159657 CCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGG 159716
| || ||| | || |||||||||| || ||| || | || | || | |||||||||
Sbjct 343006 CTTGATTTTAAGACTGTCTACACCAAAAATATTGTTTTAAACTATGGTATTCGTGCTTGG 343065
Query 159717 TTGGC 159721
||||
Sbjct 343066 ATGGC 343070
>seq7993
Length=73198
Score = 136 bits (150), Expect = 4e-27
Identities = 179/248 (72%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 159326 GATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGT 159385
|||||||||||| || | | |||| || || |||| | ||||||||| | || ||
Sbjct 57160 GATGGGAGTTGCCAGTGTATTGGGTGCGGCTCTGCTATGCGTTATTCATGGTGCTACCGT 57219
Query 159386 TGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAAC 159445
|| ||||| |||| || ||||| || ||||| || ||| | ||| | | |||
Sbjct 57220 AGAGAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTGTTTTTAACTTAAC 57279
Query 159446 TCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 159505
||||| || || |||||||| |||||||| || || | ||| |||| || ||||| |
Sbjct 57280 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAATCACTTTTGGTACCAAATCTTTGA 57339
Query 159506 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGG 159565
|||| ||||| || || || ||| | |||||||||||||| ||||| | ||| | ||
Sbjct 57340 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACTTGTAACCGG 57399
Query 159566 TCTATGGA 159573
| ||||||
Sbjct 57400 TTTATGGA 57407
>seq3386
Length=136654
Score = 120 bits (132), Expect = 3e-22
Identities = 387/596 (65%), Gaps = 36/596 (6%)
Strand=Plus/Minus
Query 157179 TATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTC 157238
||| || |||||||| ||||| ||| | | ||||| | || || |||| ||| || |
Sbjct 68001 TATTGATGGTATTCGTGAACCTGTTTTTAGATCTCTACTTTACGGAAACA-CATTATTTT 67943
Query 157239 TGGTGCAGTTGTTC---CTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGA 157295
|||||| || ||| ||||| || || || ||| | || || ||||| |||| ||
Sbjct 67942 TGGTGCCATTATTCTGACTTCTGCA---GCTATTGGTTTGCATTTTTACCCGATCTTAGA 67886
Query 157296 AGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCA 157355
| | |||| |||| || ||| | | ||| || |||| || | | | || || ||
Sbjct 67885 ATCGACATCCGTTGACGAATGGTTATGCAATGGCGGTCTTTATGAGTTAATTGTTTTACA 67826
Query 157356 CTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGG 157415
|||| | | || | | |||||||| |||| || ||||
Sbjct 67825 CTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTG------------------GTCTAGG 67784
Query 157416 TATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATT 157475
||||||| |||||| |||||| || || | || || || ||||| | | || ||
Sbjct 67783 TATGCGCTATTGGATCGCTGTTGCATATTCAACTCCTGTTGCAGCTGCTACCACTGTTTT 67724
Query 157476 CCTCGTCTATCCTTTCGGTCAAG---GTTCTTTCTCCGATGCTATGCCTCTTGGTATCTC 157532
| | ||||||| ||| ||||| ||| ||||| |||| ||||| || | |||||
Sbjct 67723 CTTAATCTATCCAATCGATCAAGGAAGTTTTTTCT--GATGGTATGCTCCTAAGAATCTC 67666
Query 157533 TGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCGTT 157592
|| |||||| || | ||| | || |||||||| || ||| || ||||||| || ||
Sbjct 67665 TGTTACTTTCAATTTCATGGTTGTATTCCAGGCTGAACAC---ATCTTTATGCACCCATT 67609
Query 157593 CCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAG 157652
|||||| | || | ||| | ||||||| || | ||| || |||||| |
Sbjct 67608 TCACATGTTAAGCATAGCTAGTGTATTCGACAACTCCCTATTCAATGTTATGCATGATTC 67549
Query 157653 TCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTATGGTT 157711
| | || || | || | ||| || | |||| || ||| || | || | ||||
Sbjct 67548 TTTGGTAACCT-CTAGTTTGATCAGGAAAACCACAAAAAATGAATTTATTAATGAAGGTT 67490
Query 157712 ACAAGTTCGGTCAAGA-AGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTT 157766
||| ||| ||||||| ||| | || || || ||| | ||||| || ||||| ||
Sbjct 67489 ACAGATTCAGTCAAGAGGGAAAAAACTTATAATATCATAGCTGCTCATGGTTATTT 67434
>seq800
Length=269375
Score = 104 bits (114), Expect = 3e-17
Identities = 165/232 (71%), Gaps = 5/232 (2%)
Strand=Plus/Plus
Query 158904 TGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG-TGCAAACTTTCTTA-CAGCAG 158961
|||||||| |||||| | || | ||||||| | || || ||||| ||||||| | ||
Sbjct 152259 TGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAA--TTTCTTAACCGCCA 152316
Query 158962 CAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGG 159021
||||||||||||| ||| || | | | |||||| | || | || ||||||||||| |
Sbjct 152317 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGGGGTCCTGAAG 152376
Query 159022 CTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCC 159081
| ||||| ||||| | ||| ||| | || || | |||| ||||| || |||
Sbjct 152377 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTTGTTGC-TTCC 152435
Query 159082 ACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 159133
|||| | || | ||||| ||||| ||| | | || |||||||| || ||
Sbjct 152436 ACGGCACGTTAGGACTAATAGGTTTTATGTTACATCAATTTGAACTTGCGCG 152487
Score = 93.3 bits (102), Expect = 5e-14
Identities = 149/209 (71%), Gaps = 5/209 (2%)
Strand=Plus/Plus
Query 158904 TGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG-TGCAAACTTTCTTA-CAGCAG 158961
|||||||| |||||| | || | ||||||| | || || ||||| ||||||| | ||
Sbjct 151345 TGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAA--TTTCTTAACCGCCA 151402
Query 158962 CAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGG 159021
||||||||||||| ||| || | | | |||||| | || | || ||||||||||| |
Sbjct 151403 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGGGGTCCTGAAG 151462
Query 159022 CTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCC 159081
| ||||| ||||| | ||| ||| | || || | |||| ||||| || |||
Sbjct 151463 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTTGTTGC-TTCC 151521
Query 159082 ACGGTGCCTTTGCCCTAATTGGTTTCATG 159110
|||| | || | ||||| ||||| |||
Sbjct 151522 ACGGCACGTTAGGACTAATAGGTTTTATG 151550
>seq7459
Length=70955
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 158213 GAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAAC-TACTCTTG 158271
|| |||||||||||| | ||||| || || |||||||||||||| ||| | || |||||
Sbjct 35499 GATGATCAATACATTTTGGACGCTGCTGAGGAAGCAGGAGTTGA-ATTGCCATATTCTTG 35441
Query 158272 TCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAG 158331
| ||||| ||||||| | |||| || ||||| || || || |||| |||||
Sbjct 35440 CAGGGCTGGAGCTTGCTGCACGTGTGTGGGGAAAATGGTTTCAGGTTCTGTGGATCAATC 35381
Query 158332 TGATCAGTCGTTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGC 158391
|| || ||||| || || | ||||| | | || | ||| || || ||||| |
Sbjct 35380 CGACGGTTCTTTCCTGGATGAAAAACAAATGGAGGATGGTTATGTGCTGACCTGTGTTTC 35321
Query 158392 ATATCCAACATCTGATTGTG 158411
||||||| || || ||||
Sbjct 35320 GTATCCAAACTCAGACTGTG 35301
>seq197
Length=406243
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 158213 GAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAAC-TACTCTTG 158271
|| |||||||||||| | |||||||| || |||||||||||||| ||| | || |||||
Sbjct 134944 GATGATCAATACATTTTGGACGCAGCCGAGGAAGCAGGAGTTGA-ATTGCCATATTCTTG 135002
Query 158272 TCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAG 158331
| ||||| ||||||| | |||| || ||||| || || || |||| |||||
Sbjct 135003 CAGGGCTGGAGCTTGCTGCACGTGTGTGGGGAAAATGGTTTCAGGTTCTGTGGATCAATC 135062
Query 158332 TGATCAGTCGTTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGC 158391
|| || ||||| || || | ||||| | | || | ||| || || ||||| |
Sbjct 135063 CGACGGCTCTTTCCTGGATGAAAAACAAATGGAGGATGGTTATGTGCTGACCTGTGTTTC 135122
Query 158392 ATATCCAACATCTGATTGTG 158411
|| |||| || || ||||
Sbjct 135123 GTACCCAAACTCAGACTGTG 135142
>seq1921
Length=184312
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 158213 GAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAAC-TACTCTTG 158271
|| ||||| |||||| | || ||||| || |||||||||||||| ||| | || |||||
Sbjct 8605 GATGATCAGTACATTTTGGATGCAGCTGAGGAAGCAGGAGTTGA-ATTGCCGTATTCTTG 8547
Query 158272 TCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAG 158331
| ||||| ||||||| | |||| || || || || || || | || |||||
Sbjct 8546 CAGGGCTGGAGCTTGCTGCACGTGTGTCGGGAAGATGGTTTCAGGTTCCGTGGATCAATC 8487
Query 158332 TGATCAGTCGTTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGC 158391
|||| || ||||| ||||| | ||||| | | || | ||| || || ||||| |
Sbjct 8486 TGATGGTTCTTTCCTGGACGAAAAACAAATTGAGGATGGTTATGTGCTAACTTGTGTTTC 8427
Query 158392 ATATCCAACATCTGATTG 158409
|| ||||| || || ||
Sbjct 8426 GTACCCAACCTCGGACTG 8409
>seq1349
Length=219574
Score = 84.2 bits (92), Expect = 2e-11
Identities = 131/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 159061 TCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGT 159120
|||||| ||||| || ||| |||| || || | ||||| ||||| || | | || |
Sbjct 71376 TCTGGATATTTGTTGCTCTCAACGGCGCTTTCGGACTAATAGGTTTTGTGTTAAGTCAAT 71435
Query 159121 TTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCT 159179
||||| | | || ||| || | | || || ||||| || || |||||||||||
Sbjct 71436 TTGAATTTGTGCGATCTATTCAATTGACA-CCTTATAATGCAATCGCATTCTCTGGTCCA 71494
Query 159180 ATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTC 159239
|||||||||||||| || ||| | || || ||||| |||||||| |||| || ||
Sbjct 71495 ATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCACTAGGTCAGTCTGGTTGATTCTTT 71554
Query 159240 GCTCC 159244
|| ||
Sbjct 71555 GCGCC 71559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544745447991040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |