Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq28189 170 6e-37 >seq28189 Length=1410 Score = 170 bits (188), Expect = 6e-37 Identities = 277/399 (69%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 188763 TAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGC 188822 |||| || | ||| |||| || ||||| |||||||| |||| ||| ||||| | || Sbjct 920 TAATATTTTATTAATTGGTCCCACTGGGAGTGGTAAAACGCTATTAGCTGAAACACTAGC 979 Query 188823 TGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTA 188882 | || | |||||||| | ||| ||||||| || | ||||| ||||| || || Sbjct 980 AAAATTGCTCAATGTACCTTTTAGTATTGCTGATGCTACAACCTTAACTGAAGCAGGGTA 1039 Query 188883 TGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATAT 188942 |||||| |||||||| ||||| || | | || | ||| | | | || || | Sbjct 1040 TGTAGGAGAAGATGTTGAAAATATAATACAAAAACTACTACAAAAATGTAAATATAATGT 1099 Query 188943 CGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATC 189002 || ||| || || ||| ||||||| |||||| | || |||||| | |||||||| Sbjct 1100 AAAAAAAGCAGAGTTAGGTATTATATATATAGATGAAATCGACAAAATTTCAAGAAAATC 1159 Query 189003 AGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAA 189062 || | | || || || ||||||| || || ||||| || || ||||||||| |||| Sbjct 1160 TGACAATCCTTCGATCACAAGAGATGTTTCAGGAGAAGGGGTTCAACAAGCTTTACTAAA 1219 Query 189063 AATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCA 189122 || || ||||| || | || |||| || |||||||| |||||||||||||| || Sbjct 1220 GATTATAGAAGGAACTTTAGCATCTATTCCACCACAAGGTGGCCGTAAACACCCTCAACA 1279 Query 189123 AGAAATGCTTGAAATAGATACAACTAATATCTTGTTTAT 189161 |||| | | || | |||| | ||||| || ||||| Sbjct 1280 AGAATTTTTACAAGTCAATACTTCAAATATTTTATTTAT 1318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1590329927476224