Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq7474 82.4 6e-11 >seq7474 Length=135391 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAAC--AGAACCCG 106317 |||||||| ||||| || || | || || ||||| |||||| |||| ||| || Sbjct 126678 ATGCAAATCTTTGTCAAGACTCTCACCGGAAAGACAATTACCTTGGAGGTCGAGAGTTCG 126737 Query 106318 GCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377 | || | ||| | |||||| |||||| ||||||||||| | | || | Sbjct 126738 G--ATACCATTGATAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATCTCATCAGACC 126795 Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437 ||||||| | |||| ||| || ||||| | |||||| | |||| | | |||||| | Sbjct 126796 AACAAAGATTGATTTTTGCAGGAAAACAGCTTGAAGATGGAAGAACTCTTGCCGATTATA 126855 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGT 106468 |||| ||||| || ||||| || ||||| || Sbjct 126856 ACATCCAAAAGGAGTCTACTCTCCATTTGGT 126886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401949645960704