Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq2693 360 2e-94
seq5102 215 6e-51
seq3550 205 1e-47
seq31365 199 5e-46
seq15646 197 2e-45
seq9889 188 8e-43
seq369 187 3e-42
seq695 161 1e-34
seq7993 154 2e-32
seq1349 134 2e-26
seq3386 132 6e-26
seq800 109 6e-19
seq869 84.2 3e-11
>seq2693
Length=259752
Score = 360 bits (398), Expect = 2e-94
Identities = 497/693 (72%), Gaps = 2/693 (0%)
Strand=Plus/Minus
Query 159700 CTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCGTCTAGTTGGTATCCGTCCTTAC 159759
|| |||||||||||| |||| |||||||| |||| || | || | || |||||
Sbjct 245619 CTAATAGGTTTTATGTTACGTAAATTTGAACTTGCGCGATTTCTTCAATTGCGACCTTAT 245560
Query 159760 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCA 159819
||||| || | ||||||||||| |||| ||||||||| |||||| | | ||||||
Sbjct 245559 AATGCAATCGTATTCTCTGGTCCAATTGTTGTTTTTGTTTCTGTATTCTTGGTTTATCCA 245500
Query 159820 CTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTC 159879
|| ||||||||| ||||||||||| || | ||| || |||||||| || |||||||||
Sbjct 245499 CTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCTATATTTAGATTC 245440
Query 159880 CTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTT 159939
| | || | || || || || || ||||| || || || |||||||||||||||
Sbjct 245439 ATCCTCTTTTTCCAAGGATTTCATAATTGGACATCGAATCCATTTCATATGATGGGAGTT 245380
Query 159940 GCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTACTGTAGAGAACACA 159999
| || || | |||| || || | || || || |||| |||||| ||||||| ||
Sbjct 245379 GTCTGTGTATTGGGTGTGGCTTTGCTATGCGCTATTCATGATGCTACCGTAGAGATTACT 245320
Query 160000 TTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCCTACTCAAGAAGAA 160059
|| ||||||||||| || ||||| | |||| || ||| | || ||||||| |||
Sbjct 245319 TTATTTGAAGATGGTGATGGTGCAAATAAATTTCGTGCTTTTAACCCAACTCAAGCCGAA 245260
Query 160060 GAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTT 160119
|| |||||||| |||||| || |||||||| ||||| || ||||| || ||| |||
Sbjct 245259 GAAACTTATTCAATGGTCGTCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTT-TTTTT 245201
Query 160120 TCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACA 160179
|| || || || ||| | ||||| || ||||| ||||| || | ||| ||| ||
Sbjct 245200 TCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAATAGCTGGTTTATAGATG 245141
Query 160180 TCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAG 160239
|| |||| | | ||||| ||| | ||||| |||| || || ||||| |||
Sbjct 245140 AGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGTCTATGACTTCGTTTCCCAG 245081
Query 160240 GAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACA-TCCTATT 160298
|| ||| ||| ||||||| ||||||||| ||||||| ||| || | | | ||
Sbjct 245080 GAAATTTATGCAATGAAAGATCCCACATTTGAGACTTTCTACATCAAAAATATTATTTTT 245021
Query 160299 GAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTT 160358
|| ||||| ||| |||||||||||| || ||||| || |||||||| |||| ||
Sbjct 245020 AAACGAAGGTATTCCTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACTTATATT 244961
Query 160359 CCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
|| |||||| || ||||| | || ||||| ||
Sbjct 244960 CCTTGAGGAGGTTCTACCCTGTGGAAACGCTCT 244928
>seq5102
Length=101622
Score = 215 bits (238), Expect = 6e-51
Identities = 293/406 (72%), Gaps = 2/406 (0%)
Strand=Plus/Minus
Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734
|||||| | ||| ||||| || | |||||| | || | || ||||| ||||| |
Sbjct 52338 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTT 52279
Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793
|||||| ||||| || | | |||||| ||||| || || |||||||| | |||||||
Sbjct 52278 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 52220
Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853
| || || || ||||| || || || ||||| ||| |||| || || | || || ||||
Sbjct 52219 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 52160
Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913
| || || |||||||| || |||||| ||| || || ||| | ||||| ||||| |
Sbjct 52159 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGA 52100
Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973
|||||||||| ||||| |||| || ||| | || || || ||||||| | | | |
Sbjct 52099 TCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAATTG 52040
Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033
| || |||||| | | || | | || ||||| |||||||||||||| || ||
Sbjct 52039 TTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 51980
Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGT 158079
|| | ||||||||||| |||||| ||| |||||||| ||||| ||
Sbjct 51979 GTCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGT 51934
>seq3550
Length=137586
Score = 205 bits (226), Expect = 1e-47
Identities = 238/320 (74%), Gaps = 1/320 (0%)
Strand=Plus/Minus
Query 158343 TCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGA 158402
|||||||||| ||||| || || || ||||| || || ||||| || || || || ||||
Sbjct 93203 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 93144
Query 158403 TCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 158462
|||| | || ||| |||||||| || ||||| || || |||||| | ||||| | ||
Sbjct 93143 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 93084
Query 158463 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACG 158522
| || || || ||||||||||| || | || | |||||| | |||||||| || |
Sbjct 93083 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 93024
Query 158523 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 158582
||||||| || ||||| | | ||||| |||| |||||||| | || ||| |||| |
Sbjct 93023 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 92965
Query 158583 ATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 158642
|| | | |||| ||| |||||||||||||||||||||| | ||| || || ||||
Sbjct 92964 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 92905
Query 158643 TCCCACTGGATCTTGCTGCT 158662
|||| || || || ||||||
Sbjct 92904 TCCCTCTAGACCTAGCTGCT 92885
>seq31365
Length=1132
Score = 199 bits (220), Expect = 5e-46
Identities = 237/320 (74%), Gaps = 1/320 (0%)
Strand=Plus/Minus
Query 158343 TCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGA 158402
|||||||||| ||||| || || || ||||| || || ||||| || || | || ||||
Sbjct 472 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGCCCGATTGA 413
Query 158403 TCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 158462
|||| | || ||| |||||||| || ||||| || || |||||| | ||||| | ||
Sbjct 412 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 353
Query 158463 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACG 158522
| || || || ||||||||||| || | || | |||||| | |||||||| || |
Sbjct 352 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 293
Query 158523 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 158582
||||||| || ||||| | | ||||| |||| |||||||| | || ||| |||| |
Sbjct 292 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 234
Query 158583 ATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 158642
|| | | |||| ||| |||||||||||||||||||||| | ||| || || ||||
Sbjct 233 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 174
Query 158643 TCCCACTGGATCTTGCTGCT 158662
|||| || || || ||||||
Sbjct 173 TCCCTCTAGACCTAGCTGCT 154
>seq15646
Length=30608
Score = 197 bits (218), Expect = 2e-45
Identities = 216/287 (75%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 160105 TTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTT 160164
|| || ||||| ||||| || || || ||| | ||||| || ||||| ||||| || ||
Sbjct 24043 TTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTA 23984
Query 160165 ATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTAC 160224
| ||| |||||| || |||| | | ||||| ||| | ||||| ||||| ||
Sbjct 23983 ACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTAT 23924
Query 160225 GATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACCTTCTACACC 160284
|| ||||| ||||| || | ||||| |||||||||||||||||||| |||||||||
Sbjct 23923 GACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACC 23864
Query 160285 AAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGATCAACCACAT 160344
|| || || || || || ||||| |||||||||||||||| || ||||| || |||
Sbjct 23863 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCAT 23804
Query 160345 GAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
|||||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 23803 GAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 23757
Score = 167 bits (184), Expect = 3e-36
Identities = 259/365 (71%), Gaps = 4/365 (1%)
Strand=Plus/Minus
Query 159412 CGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATATGGCCATT 159471
|| || || ||||| |||||||| || || | || |||| ||| ||| | || |
Sbjct 24407 CGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTA 24348
Query 159472 GGCGGTTGGCTTACTGGCACGACTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGT 159531
|| |||||| |||| || || || ||| | || ||||| || || || | || |||
Sbjct 24347 GGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGTGGTATACTCATGGATTGGCCAGT 24288
Query 159532 TCCTACCTTGAAGG-TGCTAATTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTAT 159590
||||| | ||||| ||| ||||| | || || || || || || |||||| || | |
Sbjct 24287 TCCTATTTGGAAGGCTGC-AATTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTT 24229
Query 159591 GGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTG 159650
| |||||| | | |||| ||||||||||| | ||||| || || || |||||
Sbjct 24228 AGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTG 24169
Query 159651 CCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTT 159710
||| | || || | ||| | ||||||||||||||||| || |||| || ||||||||
Sbjct 24168 TCAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCACGGCGCTTTCGGACTAATAGGTTT 24109
Query 159711 TATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTG 159769
|||| |||| ||||||||| |||| || ||| ||| | || ||||| ||||| || |
Sbjct 24108 TATGTTACGTCAATTTGAACTTGCGCGATCT-GTTCAATTGCGACCTTATAATGCAATCG 24050
Query 159770 CGTTC 159774
| |||
Sbjct 24049 CATTC 24045
>seq9889
Length=72821
Score = 188 bits (208), Expect = 8e-43
Identities = 291/410 (71%), Gaps = 4/410 (1%)
Strand=Plus/Plus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | | || || || || ||||| |||||||| ||
Sbjct 45036 TTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGC 45095
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||| ||| | || | || |||||| |||| || || || |||
Sbjct 45096 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTTACAGGTACAACCTTT 45155
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCT 159557
| || ||||| || || || | || |||||||| | ||||| ||| ||||| |
Sbjct 45156 GTAACTTCGTGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AATTTCTT 45214
Query 159558 CACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 159617
|| || || || || || |||||| || | | | |||||| | | |||| |||||
Sbjct 45215 AACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGG 45274
Query 159618 TCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGT 159677
|||||| | ||||| || || || ||||| ||| | || || | ||| | |||||
Sbjct 45275 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACATTTGT 45334
Query 159678 TGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG 159737
|||||||||||| || |||| || |||||||||||| |||| ||||||||| ||| ||
Sbjct 45335 TGCTCTCCACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGTGCG 45394
Query 159738 -TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATT 159786
||| ||| | || ||||| ||||| || || ||||||||||| |||
Sbjct 45395 ATCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATT 45443
>seq369
Length=444201
Score = 187 bits (206), Expect = 3e-42
Identities = 234/321 (73%), Gaps = 0/321 (0%)
Strand=Plus/Plus
Query 160005 TGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAGAC 160064
|| |||||| || |||||||||||| || ||| | || ||||||| ||||| ||
Sbjct 342750 TGGAGATGGTGATGGTGCAAACACATTTCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 342809
Query 160065 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAA 160124
|||||| |||||||| || |||||||| ||||| || ||||| | ||||| ||||| |
Sbjct 342810 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTTGGGTTGCTTTTTCCAT 342869
Query 160125 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTC 160184
|| || ||| | ||||| || ||||| ||||| || || | || |||||| |
Sbjct 342870 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGCTTATGGATGAGTGC 342929
Query 160185 TATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGAT 160244
| |||| | ||||||| ||| | ||||| ||||| | || ||||| ||||| ||
Sbjct 342930 TCTTGGAGTAGTTGGTCTGGCTCTTAACCTACGTGCCCATGACTTCGTTTCCCAGGAAAT 342989
Query 160245 TAGAGCAGCAGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGA 160304
| ||||| ||||||| ||| ||| |||| |||||||||| || || | || || |
Sbjct 342990 CCGTGCAGCGGAAGATCTTGATTTTAAGACTGTCTACACCAAAAATATTGTTTTAAACTA 343049
Query 160305 AGGACTTCGTGCTTGGATGGC 160325
|| ||||||||||||||||
Sbjct 343050 TGGTATTCGTGCTTGGATGGC 343070
>seq695
Length=285002
Score = 161 bits (178), Expect = 1e-34
Identities = 319/471 (68%), Gaps = 1/471 (0%)
Strand=Plus/Minus
Query 157700 AACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCTACGTTGCTTGCTGCA 157759
|| || ||| | ||| | | ||||| | ||| | ||||| ||||| || | | |||
Sbjct 41120 AAAAATCGTCTTTATATCAGATGGTTTGTTGTTTTAATGATCCCTACCTTATTGACCGCA 41061
Query 157760 ACTATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGC 157819
||| | | || || ||| ||| | ||||||| | | || ||||| || || ||
Sbjct 41060 ACTTTTTTATTTATTATCGTCTTTATTGCTGCTCTTCTAATAGATATTGATGGTATTCGT 41001
Query 157820 GAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCT 157879
||||| || |||| || || | || || ||||| || || ||||||| || ||| |
Sbjct 41000 GAACCTATTTCTGGATCTCTACTTTACGGAAACAAAATTATTTCTGGTGTCATTATTCTT 40941
Query 157880 AGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGCAGCATCTCTTGACGAG 157939
| ||| | || ||| | | ||| |||| ||||||||||| ||||| |||| ||
Sbjct 40940 ACTTCTGTAGTTATTGGTTTGCTCTTTTACCAGATCTGGGAAGCGGCATCCGTTGATGAA 40881
Query 157940 TGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTTCCTGATCGGCATCTAT 157999
||| | || || || ||||||| | | | || || |||||| | | || | |
Sbjct 40880 TGG-TATACAATGGCGGTCCTTATGAGTTAATTGTTTTACACTTCTTACTTGGTGTAGCT 40822
Query 158000 GCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGT 158059
|| || || ||||||| |||||| || || | ||||||||| ||| ||||| |
Sbjct 40821 TGTTACATAGGTCGTGAGTTGGAACTTAGTTTCCATCTAGGTATGCACCCTTGGATTGCT 40762
Query 158060 GTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGT 158119
| |||||||| |||| | || || | | | | || ||| | ||||||| |||||
Sbjct 40761 ATTGCATATTCAACTCCTATTGCAGCTACTACTACTGTTTTCTTGATCTATCCAATCGGT 40702
Query 158120 CAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAAC 158170
||||| ||| || |||| ||||||| | || ||||||| |||||| |||
Sbjct 40701 CAAGGGAATTTTTCTGATGGTATGCCTTTAGGAATCTCTGATACTTTCAAC 40651
>seq7993
Length=73198
Score = 154 bits (170), Expect = 2e-32
Identities = 183/248 (74%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 159930 GATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTACTGT 159989
|||||||||||| || || | |||| || ||| | || | || ||||||||||| ||
Sbjct 57160 GATGGGAGTTGCCAGTGTATTGGGTGCGGCTCTGCTATGCGTTATTCATGGTGCTACCGT 57219
Query 159990 AGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCCTAC 160049
|||||| || || ||||||||||| || ||||| |||||| | ||| | ||
Sbjct 57220 AGAGAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTGTTTTTAACTTAAC 57279
Query 160050 TCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 160109
||||| ||||| |||||||| |||||||| || || | ||| |||| || ||||| |
Sbjct 57280 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAATCACTTTTGGTACCAAATCTTTGA 57339
Query 160110 TGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 160169
||||| ||||| || || || ||| | ||||| || ||||| ||||| | ||| | ||
Sbjct 57340 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACTTGTAACCGG 57399
Query 160170 TCTATGGA 160177
| ||||||
Sbjct 57400 TTTATGGA 57407
>seq1349
Length=219574
Score = 134 bits (148), Expect = 2e-26
Identities = 143/186 (77%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 159673 TTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATT 159732
|||||||||||| |||| || |||| || ||||||||| || || | ||||||||| ||
Sbjct 71384 TTTGTTGCTCTCAACGGCGCTTTCGGACTAATAGGTTTTGTGTTAAGTCAATTTGAATTT 71443
Query 159733 GCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 159791
| || |||| | | | ||||| ||||| || || ||||||||||| ||||||||
Sbjct 71444 GTGCGATCTATTCAATTGACA-CCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGT 71502
Query 159792 TTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAG 159851
|||||| |||||| | || |||||||| ||||||||| || |||||||| || ||
Sbjct 71503 TTTTGTTTCTGTATTCTTGATTTATCCACTAGGTCAGTCTGGTTGATTCTTTGCGCCCAG 71562
Query 159852 TTTCGG 159857
||| ||
Sbjct 71563 TTTTGG 71568
>seq3386
Length=136654
Score = 132 bits (146), Expect = 6e-26
Identities = 312/472 (66%), Gaps = 27/472 (6%)
Strand=Plus/Minus
Query 157805 ATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 157864
||||| || || || ||||| ||| | | || || | || || |||| ||| || | |
Sbjct 68000 ATTGATGGTATTCGTGAACCTGTTTTTAGATCTCTACTTTACGGAAACA-CATTATTTTT 67942
Query 157865 GGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGCA 157924
||||| || ||| | ||| || || ||| | || || ||||| |||| ||| |
Sbjct 67941 GGTGCCATTATTCTGACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTTAGAATCG 67882
Query 157925 GCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTTC 157984
|||| ||||||| ||| | | || || |||| || | | | || || ||||||
Sbjct 67881 ACATCCGTTGACGAATGGTTATGCAATGGCGGTCTTTATGAGTTAATTGTTTTACACTTC 67822
Query 157985 CTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATG 158044
| | || | | |||||||| |||| || ||||||||
Sbjct 67821 TTACTTGGTGTAGCTTGTTATATGGGTCGTG------------------GTCTAGGTATG 67780
Query 158045 CGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTA 158104
||| |||||| ||| |||||||| |||| || || || || | | || ||| ||
Sbjct 67779 CGCTATTGGATCGCTGTTGCATATTCAACTCCTGTTGCAGCTGCTACCACTGTTTTCTTA 67720
Query 158105 GTCTATCCTTTCGGTCAAG---GTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGT 158161
||||||| ||| ||||| ||| ||||| |||| ||||| || | ||||||| |
Sbjct 67719 ATCTATCCAATCGATCAAGGAAGTTTTTTCT--GATGGTATGCTCCTAAGAATCTCTGTT 67662
Query 158162 ACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCAT 158221
||||| || | |||| |||||||||| || |||| ||||| |||||||||| || ||
Sbjct 67661 ACTTTCAATTTCATGGTTGTATTCCAGGCTGAAC---ACATCTTTATGCACCCATTTCAC 67605
Query 158222 ATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273
||| | | | ||| | ||||||| || || ||| || ||||||||
Sbjct 67604 ATGTTAAGCATAGCTAGTGTATTCGACAACTCCCTATTCAATGTTATGCATG 67553
>seq800
Length=269375
Score = 109 bits (120), Expect = 6e-19
Identities = 189/268 (71%), Gaps = 5/268 (2%)
Strand=Plus/Plus
Query 159508 TGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCTCACGGCAGC 159566
||||| || || || | || |||||||| | ||||| ||| ||||| | || || |
Sbjct 152259 TGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGC-AATTTCTTAACCGCCAC 152317
Query 159567 TGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTC 159626
|| || || |||||| || | | | |||||| | | |||| ||||||||||| |
Sbjct 152318 AGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGGGGTCCTGAAGC 152377
Query 159627 TCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCA 159686
||||| || || || ||||| ||| | || || || ||| | ||||||||| ||||
Sbjct 152378 ACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTTGTTGCT-TCCA 152436
Query 159687 CGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTG 159745
||| | || | || |||||||||||| ||| ||||||||| |||| || ||| |||
Sbjct 152437 CGGCACGTTAGGACTAATAGGTTTTATGTTACATCAATTTGAACTTGCGCGATCT-GTTC 152495
Query 159746 GTATCCGTCCTTACAATGCTATTGCGTT 159773
| | ||||| ||||| || || ||
Sbjct 152496 AATTGTGACCTTATAATGCAATCGCATT 152523
Score = 98.7 bits (108), Expect = 1e-15
Identities = 156/220 (71%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 159508 TGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCTCACGGCAGC 159566
||||| || || || | || |||||||| | ||||| ||| ||||| | || || |
Sbjct 151345 TGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGC-AATTTCTTAACCGCCAC 151403
Query 159567 TGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTC 159626
|| || || |||||| || | | | |||||| | | |||| ||||||||||| |
Sbjct 151404 AGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGGGGTCCTGAAGC 151463
Query 159627 TCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCA 159686
||||| || || || ||||| ||| | || || || ||| | ||||||||| ||||
Sbjct 151464 ACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTTGTTGCT-TCCA 151522
Query 159687 CGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTT 159726
||| | || | || |||||||||||| ||| ||||||
Sbjct 151523 CGGCACGTTAGGACTAATAGGTTTTATGTTACATCAATTT 151562
>seq869
Length=261632
Score = 84.2 bits (92), Expect = 3e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 159780 TCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTT 159839
||| |||||||||||||| ||||| || || |||||||| | ||| ||| |||||
Sbjct 195711 TCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCACTAGATCAATCTGATTGGTT 195770
Query 159840 CTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTT 159899
||||| || | ||| | ||| ||| || ||| ||||| | | || |||| | ||
Sbjct 195771 CTTTGTGCCCAATTTTGATGTAAAAGCTATATTTCGATTCATCCTCTTTTTTCAATGATT 195830
Query 159900 CCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTG 159943
|| || || || | ||| | || ||||||| ||||||||||
Sbjct 195831 TCATAATTGAACATTGAACTCATTTTATATGATTGGAGTTGCTG 195874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572468968953600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |