Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq4679 105 5e-18 seq1260 105 5e-18 seq9733 102 6e-17 seq1278 102 6e-17 seq10551 96.9 2e-15 seq8995 95.1 9e-15 seq3967 93.3 3e-14 seq3410 93.3 3e-14 seq14711 87.8 1e-12 seq14362 87.8 1e-12 seq11709 84.2 2e-11 seq2108 84.2 2e-11 >seq4679 Length=107372 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||| || ||||| ||||| || || | || || |||||| | Sbjct 37803 ATGCAGATTTTTGTGAAGACACTTACGGGGAAGACCATCACCTTGGAAGTTGAAAGCTCG 37744 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| || || || || ||||| || ||| | || || | Sbjct 37743 GACACGATTGACAAT--GTTAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCAGATC 37686 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| |||||||| || || |||||||| |||| |||| |||| |||| || | Sbjct 37685 AGCAGAGGTTGATTTTTGCTGGTAAGCAATTGGAGGACGGGCGCACCTTGGCCGACTATA 37626 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| ||| | || ||||| | ||| | ||||| || Sbjct 37625 ACATCCAAAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTTCGTGGTGG 37577 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||| || || || || || || |||||| | || || || || | Sbjct 39302 ATGCAAATCTTTGTTAAGACCCTCACCGGAAAGACCATTACATTGGAGGTGGAGAGTTCA 39243 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || ||||| ||||| ||| || ||||| |||||| | || || | Sbjct 39242 GATACAATTGACAAT--GTCAAGGCAAAGATTCAGGACAAGGAAGGTATCCCCCCAGACC 39185 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| |||||||| || || ||| | || || | |||| |||| | || || | Sbjct 39184 AGCAGAGGTTGATTTTTGCTGGTAAGCAACTAGAGGATGGCCGCACCTTGGCTGACTATA 39125 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| ||| | ||| |||| | ||| | ||||| || Sbjct 39124 ACATCCAAAAGGAGTCCACCCTCCATCTGGTGCTCCGTCTTCGTGGTGG 39076 >seq1260 Length=223926 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||| || ||||| ||||| || || | || || |||||| | Sbjct 116485 ATGCAGATTTTTGTGAAGACACTTACGGGGAAGACCATCACCTTGGAAGTTGAAAGCTCG 116544 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| || || || || ||||| || ||| | || || | Sbjct 116545 GACACGATTGACAAT--GTTAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCAGATC 116602 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| |||||||| || || |||||||| |||| |||| |||| |||| || | Sbjct 116603 AGCAGAGGTTGATTTTTGCTGGTAAGCAATTGGAGGACGGGCGCACCTTGGCCGACTATA 116662 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| ||| | || ||||| | ||| | ||||| || Sbjct 116663 ACATCCAAAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTTCGTGGTGG 116711 >seq9733 Length=51005 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || |||||||| || || || ||| || || | || ||||| ||| || Sbjct 37425 ATGCAAATCTTCGTGAAAACCCTGACCGGAAAAACCATCACCTTGGAAGTCGAGAGCTCC 37366 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || |||| ||||| ||||| ||||| |||||| | || ||| | Sbjct 37365 GACACCATCGACAAC--GTCAAGGCCAAAATCCAAGACAAGGAAGGTATCCCACCGGACC 37308 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | || || ||||| || ||| | || |||| || | ||| |||| |||| Sbjct 37307 AGCAGAGGCTCATCTTCGCCGGGAAGCAACTTGAGGACGGTCGAACTTTGGCCGACTACA 37248 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| || | |||||||||||| | | |||||||| Sbjct 37247 ACATCCAAAAGGAGTCGACCCTTCATTTGGTTTTGAGGCTTCGTGGCGG 37199 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || ||| | ||||||||| ||||| | || || || || | Sbjct 37197 ATGCAGATCTTCGTCAAGACTTTGACTGGGAAAACCATTACTCTGGAGGTGGAGAGTTCT 37138 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| || || ||||||||||| |||| || | Sbjct 37137 GATACGATTGATAAT--GTCAAGGCGAAGATTCAGGACAAAGAAGGGATTCCCCCAGATC 37080 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| |||||||| || ||||||||||| || | | | | ||| | ||||||| Sbjct 37079 AGCAGAGGTTGATTTTTGCTGGGAAACAATTGGAAGATGGAAGGACTTTGGCTGATTACA 37020 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | || || || || ||| | ||| | || |||||| | ||||| || Sbjct 37019 ATATTCAGAAGGAATCAACTCTTCATCTTGTCTTGCGTCTTCGTGGTGG 36971 >seq1278 Length=225562 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || |||||||| || || || || || || | || ||||| ||| || Sbjct 157620 ATGCAGATCTTCGTGAAAACCCTGACGGGCAAGACAATCACCTTGGAAGTCGAGAGCTCC 157679 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || |||| ||||| || || ||||| ||||| | || ||| | Sbjct 157680 GACACCATCGACAAC--GTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCGGACC 157737 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| | || || ||||||||||| | || |||| || | |||| ||||||||| Sbjct 157738 AGCAACGTCTCATCTTCGCCGGAAAACAGCTCGAGGACGGTCGTACCTTGGCCGATTACA 157797 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| || | |||||||||||| | | |||||||| Sbjct 157798 ACATCCAAAAGGAGTCGACCCTTCATTTGGTTTTGAGGCTTCGTGGCGG 157846 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || |||||| | || |||||| ||||| | || || || || | Sbjct 157848 ATGCAGATCTTCGTCAAAACTTTGACCGGGAAAACCATTACTCTGGAGGTGGAGAGTTCT 157907 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| || || ||||||||||| |||| || | Sbjct 157908 GATACGATTGATAAT--GTCAAGGCGAAGATTCAGGACAAAGAAGGGATTCCCCCAGACC 157965 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| ||||| || || ||||||||||| || | | | | ||| | ||||||| Sbjct 157966 AGCAGAGGTTGATTTTCGCTGGGAAACAATTGGAAGATGGAAGGACTTTGGCTGATTACA 158025 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | || ||||| || |||| | || | || |||||| | ||||| || Sbjct 158026 ATATACAAAAGGAATCCACTCTTCACCTTGTCTTGCGTCTTCGTGGTGG 158074 >seq10551 Length=45279 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||| || || || ||||| || || | || || || ||| | Sbjct 29807 ATGCAGATTTTTGTGAAGACACTCACAGGGAAGACCATCACCTTGGAGGTTGAGAGCTCG 29866 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| ||||| ||||| || || |||||| | ||| || | Sbjct 29867 GACACCATTGACAAT--GTCAAGGCTAAAATTCAAGATAAGGAAGGTATCCCGCCAGACC 29924 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| ||||||||||| |||||| | || || | |||| |||| | || |||| Sbjct 29925 AGCAGAGGTTGATTTTTGCCGGTAAACAACTCGAAGATGGCCGCACCTTGGCTGACTACA 29984 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || ||| | || ||||| | ||| | ||||| || Sbjct 29985 ACATCCAAAAGGAATCCACCCTTCACTTGGTGCTCCGTCTCCGTGGTGG 30033 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/238 (69%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || || ||||| ||| || || |||| || |||||| | Sbjct 35497 ATGCAGATATTTGTCAAGACCCTGACTGGTAAAACAATCACCCTTGAGGTTGAAAGCTCA 35556 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| || ||| ||| || ||||| || || |||| ||| | Sbjct 35557 GACACGATTGACAAT--GTGAAAGCAAAGATTCAGGACAAGGAGGGAATTCCCCCGGATC 35614 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || ||||| || || || ||||| || | || | || | ||||||| Sbjct 35615 AGCAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGAACTTTAGCTGATTACA 35674 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC-GATT 28024 ||||||| || ||| ||| ||||| | || | || | ||||| ||| || |||| Sbjct 35675 ACATCCAGAAGGAGTCCACCCTGCATCTTGTCCTTCGCCTCCGTGGTGGCTACTGATT 35732 >seq8995 Length=56531 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || || | || ||| || | |||||||||||| || Sbjct 47640 ATGCAGATCTTTGTTAAAACCCTAACCTGCAAGACTATCACTCTCGATGTCGAAAGCTCC 47699 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || | ||| |||||| || || || |||||||| | || ||| | Sbjct 47700 GACACCATAGATAAT--GTCAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCAGGATC 47757 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || || |||||||||||| | || || | |||| |||| | ||||||| Sbjct 47758 AGCAGCGATTGATCTTCGCCGGAAAACAACTCGAGGATGGCCGCACCTTGGCGGATTACA 47817 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 | |||||||| || ||| | ||| |||| | | | ||||||||| Sbjct 47818 ATATCCAAAAGGAATCGACTCTCCATCTGGTCCTCAGGCTTCGTGGCGGC 47867 >seq3967 Length=121343 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || |||||||| || || || ||| || || | || ||||| ||| || Sbjct 66233 ATGCAAATCTTCGTGAAAACCCTGACCGGCAAAACAATCACCTTGGAAGTCGAGAGCTCC 66292 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || |||| ||||| || || ||||| ||||| | || ||| | Sbjct 66293 GACACCATCGACAAC--GTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACC 66350 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| | || || || |||||||| | || |||| || | |||| | || |||| Sbjct 66351 AGCAACGTCTCATCTTCGCTGGAAAACAGCTCGAGGACGGCCGTACCTTGGCTGACTACA 66410 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| || | |||||||| ||| | | |||||||| Sbjct 66411 ACATCCAAAAGGAGTCGACCCTTCATTTGGTCTTGAGGCTTCGTGGCGG 66459 >seq3410 Length=189534 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||| || |||||||| || || || | || || ||||| || Sbjct 155315 ATGCAGATTTTTGTGAAGACACTTACTGGAAAGACCATCACCTTGGAGGTTGAAAGTTCC 155256 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || | ||| ||||| || || ||||| || ||| | ||| || | Sbjct 155255 GACACAATAGATAAT--GTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCGCCAGACC 155198 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| |||||||| || || ||| | || || | |||| |||| |||| || | Sbjct 155197 AGCAGAGGTTGATTTTTGCAGGTAAGCAACTTGAGGATGGGCGCACCTTGGCCGACTATA 155138 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| ||| | || ||||| | ||| | ||||| || Sbjct 155137 ACATCCAAAAGGAGTCCACCCTCCACTTGGTGCTTCGTCTTCGTGGTGG 155089 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || ||||||||||| || || | || || |||||| | Sbjct 155543 ATGCAGATATTTGTTAAGACACTTACTGGGAAGACCATCACCTTGGAAGTTGAAAGCTCT 155484 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| ||||| || || ||||| || ||| | || || | Sbjct 155483 GACACGATTGACAAT--GTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCAGACC 155426 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || ||||| || || ||| |||| || | |||| |||| | || || | Sbjct 155425 AGCAGAGGTTGATCTTTGCTGGGAAGCAACTGGAAGATGGGCGCACCTTGGCAGACTATA 155366 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| ||| ||| | || ||||| | ||| | ||||| || Sbjct 155365 ACATCCAAAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTTCGTGGTGG 155317 >seq14711 Length=21231 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||| || ||||||||||| || ||||| | || || || || | Sbjct 4841 ATGCAAATCTTTGTCAAGACTCTTACTGGAAAGACAATTACCTTGGAGGTTGAGAGTTCA 4900 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| ||||| ||||||||||| |||| || | Sbjct 4901 GATACCATTGATAAT--GTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCACCAGACC 4958 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966 | ||| | || |||||||| |||||||| | || || | | | | |||| ||||||| Sbjct 4959 AACAAAGATTGATTTTTGCAGGAAAACAGCTTGAAGATGGAAGAACTCTTG-CCGATTAT 5017 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || |||||||| ||| ||| | ||||||||| | || | ||||| || Sbjct 5018 AATATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCCGCCTTCGTGGAGG 5067 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG--CA 27847 ||||| || |||||||| ||||||||||| || || || | || || ||||| || Sbjct 5069 ATGCAGATCTTTGTGAAGACTCTTACTGGAAAGACCATCACTTTGGAAGTTGAAAGTTCA 5128 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || ||||| || || ||| || ||||| || ||| |||| || | Sbjct 5129 GACACAATTGACAAT--GTGAAGGCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACC 5186 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| | | || |||||||| || ||| | || || | | | | ||| | || || | Sbjct 5187 AGCAAAGACTCATCTTTGCCGGCAAGCAACTTGAAGATGGAAGGACATTGGCAGACTATA 5246 Query 27968 ACATCCAAAAAGAG--AGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | |||||||| ||| | ||||| || ||||| ||||| |||||||| || Sbjct 5247 ATATCCAAAAGGAGTCAACACTT--CACTTGGTGTTGCGCTTGCGTGGTGG 5295 >seq14362 Length=23126 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| |||||||| || || |||||||| || || | || || || ||| | Sbjct 16853 ATGCAAATCTTTGTGAAGACACTCACTGGGAAGACCATCACCTTGGAGGTTGAGAGCTCG 16794 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | ||||| ||||| ||||| || || || ||| | || || | Sbjct 16793 GACACTATTGACAAT--GTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGACC 16736 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || |||||||| |||||| | || || | |||| |||| | || |||| Sbjct 16735 AGCAGAGGTTGATATTTGCCGGTAAACAACTCGAGGATGGCCGCACCTTGGCTGACTACA 16676 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| |||||| || | || ||||| | ||| | ||||| || Sbjct 16675 ACATCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGTCTCCGTGGTGG 16627 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| |||||||| || || |||||||| || || | || || || ||| | Sbjct 17081 ATGCAAATCTTTGTGAAGACACTCACTGGGAAGACCATCACCTTGGAGGTTGAGAGCTCG 17022 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | ||||| ||||| ||||| || || || ||| | || || | Sbjct 17021 GACACTATTGACAAT--GTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGACC 16964 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| | || || |||||||| |||||| | || || | |||| |||| | || |||| Sbjct 16963 AGCAGAGATTGATATTTGCCGGTAAACAACTCGAGGATGGCCGCACCTTGGCTGACTACA 16904 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || ||| | || ||||| | ||| | ||||| || Sbjct 16903 ACATCCAAAAGGAATCCACCCTTCACTTGGTGCTCCGTCTCCGTGGTGG 16855 >seq11709 Length=37133 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || ||||| || || || ||| || || | || ||||| ||| || Sbjct 7974 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAAACCATAACCTTGGAAGTCGAGAGCTCC 7915 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| |||| ||||| || || ||||| ||||| |||| ||| | Sbjct 7914 GACACGATCGACAAC--GTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCACCGGACC 7857 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | || || ||||||||||| | || |||| || | ||| ||||||||| Sbjct 7856 AGCAGAGGCTCATATTCGCCGGAAAACAGCTCGAGGACGGCCGGACTTTGGCCGATTACA 7797 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| || || || | ||| |||||||| | | ||||| || Sbjct 7796 ACATCCAGAAGGAATCGACCCTTCATCTGGTTTTGAGGCTTCGTGGTGG 7748 >seq2108 Length=174870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||||||||| |||||||| || || || ||| || |||||| | Sbjct 61272 ATGCAAATTTTTGTGAAAACCCTTACTGGCAAGACCATAACTCTTGTGGTGGAAAGCTCT 61213 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| || || ||||||||||| | || || | Sbjct 61212 GATACGATAGATAAT--GTCAAGGCCAAGATCCAAGACAAAGAAGGGATCCCTCCAGACC 61155 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || || | || |||||||| ||||| | || || | || ||| | | ||||||| Sbjct 61154 AACAGAGGCTCATCTTTGCCGGTAAACAGCTCGAGGATGGCCGAAGCCTTGCTGATTACA 61095 Query 27968 ACATCCAAAAAGAG 27981 ||||||| |||||| Sbjct 61094 ACATCCAGAAAGAG 61081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355526328887376