Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq3550 253 3e-62
seq31365 250 3e-61
seq5102 228 1e-54
seq695 159 4e-34
seq369 156 5e-33
seq9889 150 2e-31
seq15646 141 1e-28
seq3386 140 4e-28
seq7459 109 7e-19
seq1658 100 4e-16
seq197 98.7 1e-15
seq7475 91.5 2e-13
seq3176 89.7 6e-13
seq800 82.4 9e-11
seq507 82.4 9e-11
>seq3550
Length=137586
Score = 253 bits (280), Expect = 3e-62
Identities = 249/320 (78%), Gaps = 1/320 (0%)
Strand=Plus/Minus
Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922
|||||||||| ||||| || || || || || ||||||||||| || ||||| || |||
Sbjct 93203 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 93144
Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982
|||| | ||||||| || ||||||||||||||| | || |||||| | ||||||| ||
Sbjct 93143 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 93084
Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042
| || || || |||||||| |||||| | ||| ||||||| ||| | || ||||| ||||
Sbjct 93083 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 93024
Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAG 184102
|||| || || ||||| | | ||||| ||||||||||||| | || ||| |||| |
Sbjct 93023 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 92965
Query 184103 ACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACT 184162
| || | |||| |||| |||| |||||||| ||||| || | ||| ||||| ||||
Sbjct 92964 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 92905
Query 184163 TCCCTCTCGACCTTGCTGCT 184182
||||||| ||||| ||||||
Sbjct 92904 TCCCTCTAGACCTAGCTGCT 92885
>seq31365
Length=1132
Score = 250 bits (276), Expect = 3e-61
Identities = 248/320 (78%), Gaps = 1/320 (0%)
Strand=Plus/Minus
Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922
|||||||||| ||||| || || || || || ||||||||||| || |||| || |||
Sbjct 472 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGCCCGATTGA 413
Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982
|||| | ||||||| || ||||||||||||||| | || |||||| | ||||||| ||
Sbjct 412 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 353
Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042
| || || || |||||||| |||||| | ||| ||||||| ||| | || ||||| ||||
Sbjct 352 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 293
Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAG 184102
|||| || || ||||| | | ||||| ||||||||||||| | || ||| |||| |
Sbjct 292 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 234
Query 184103 ACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACT 184162
| || | |||| |||| |||| |||||||| ||||| || | ||| ||||| ||||
Sbjct 233 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 174
Query 184163 TCCCTCTCGACCTTGCTGCT 184182
||||||| ||||| ||||||
Sbjct 173 TCCCTCTAGACCTAGCTGCT 154
>seq5102
Length=101622
Score = 228 bits (252), Expect = 1e-54
Identities = 297/408 (73%), Gaps = 2/408 (0%)
Strand=Plus/Minus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
|||||| | ||||| ||||||||| | ||||| || || | || |||||||| |
Sbjct 52338 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTT 52279
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
|||||| || || | ||| | ||||| |||| || || | |||||| | |||||||
Sbjct 52278 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 52220
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || || || || ||||| ||| |||| || || | || |||||||
Sbjct 52219 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 52160
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| || || |||||||| || ||||| |||| || || || | ||||| || || |
Sbjct 52159 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGA 52100
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
|||||||||| ||||| | ||||| ||| | || || || |||||||| | | | |
Sbjct 52099 TCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAATTG 52040
Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553
| || |||||| | |||| || || ||||||||||||||||||||| | || ||
Sbjct 52039 TTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 51980
Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTG 183601
|||| |||||||| ||||||||| |||||| ||| || |||||||
Sbjct 51979 GTCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGTTG 51932
>seq695
Length=285002
Score = 159 bits (176), Expect = 4e-34
Identities = 282/410 (69%), Gaps = 1/410 (0%)
Strand=Plus/Minus
Query 183256 ATGATTCCAACTCTGTTGGCAGCAACCATCTGCTTCATCGTTGCCTTCGTCGCTGCTCCT 183315
||||| || || | ||| | ||||| | | || || | | ||| | ||||||| |
Sbjct 41084 ATGATCCCTACCTTATTGACCGCAACTTTTTTATTTATTATCGTCTTTATTGCTGCTCTT 41025
Query 183316 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAAC 183375
| | || || || || || || ||||| || |||| || || | || ||||||||
Sbjct 41024 CTAATAGATATTGATGGTATTCGTGAACCTATTTCTGGATCTCTACTTTACGGAAACAAA 40965
Query 183376 ATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATC 183435
|| || ||||||| || ||| | |||| | ||||| | | ||| || | |||
Sbjct 40964 ATTATTTCTGGTGTCATTATTCTTACTTCTGTAGTTATTGGTTTGCTCTTTTACCAGATC 40905
Query 183436 TGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTC 183495
|||||||| ||||| | ||||| ||| | || || || |||||||| | | | ||
Sbjct 40904 TGGGAAGCGGCATCCGTTGATGAATGG-TATACAATGGCGGTCCTTATGAGTTAATTGTT 40846
Query 183496 TTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGT 183555
|| |||||| | |||| || || ||||| |||||||||| |||| | || || |
Sbjct 40845 TTACACTTCTTACTTGGTGTAGCTTGTTACATAGGTCGTGAGTTGGAACTTAGTTTCCAT 40786
Query 183556 CTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCT 183615
|| ||||||| |||||||| | |||| ||| | ||| |||| ||| | || ||
Sbjct 40785 CTAGGTATGCACCCTTGGATTGCTATTGCATATTCAACTCCTATTGCAGCTACTACTACT 40726
Query 183616 GTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCC 183665
|| ||| || ||||||| |||||||||| |||| ||||||||||||
Sbjct 40725 GTTTTCTTGATCTATCCAATCGGTCAAGGGAATTTTTCTGATGGTATGCC 40676
>seq369
Length=444201
Score = 156 bits (172), Expect = 5e-33
Identities = 229/324 (71%), Gaps = 0/324 (0%)
Strand=Plus/Plus
Query 186584 TTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACGACGCAAGAAGAAGA 186643
||||| |||||| || ||||||||||| || || | | || |||| |||||
Sbjct 342747 TTATGGAGATGGTGATGGTGCAAACACATTTCGTGCTTTTAACCCAACTCAAGCCGAAGA 342806
Query 186644 AACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTCGGAATTGCGTTTAG 186703
||| ||||| |||||||| || ||| | || ||||| || ||||| | |||| |||
Sbjct 342807 AACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTTGGGTTGCTTTTTC 342866
Query 186704 CAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTC 186763
|| ||| |||||| | |||||||| ||| | ||||| || || | || | ||||
Sbjct 342867 CATTAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGCTTATGGATGAG 342926
Query 186764 TTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGA 186823
| | |||| | ||||||| ||||||||||| ||||| ||||||| || |||||
Sbjct 342927 TGCTCTTGGAGTAGTTGGTCTGGCTCTTAACCTACGTGCCCATGACTTCGTTTCCCAGGA 342986
Query 186824 GGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAATATCCTATTGAA 186883
| | ||||| || |||| ||| || |||| |||| ||||| ||||| | || ||
Sbjct 342987 AATCCGTGCAGCGGAAGATCTTGATTTTAAGACTGTCTACACCAAAAATATTGTTTTAAA 343046
Query 186884 TGAAGGTCTACGTGCCTGGATGGC 186907
| ||| | ||||| ||||||||
Sbjct 343047 CTATGGTATTCGTGCTTGGATGGC 343070
>seq9889
Length=72821
Score = 150 bits (166), Expect = 2e-31
Identities = 276/399 (69%), Gaps = 4/399 (1%)
Strand=Plus/Plus
Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030
||||||||||| | | ||||| || || ||||| || ||||| || || | || |
Sbjct 45046 TGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCT 45105
Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090
|||| ||| ||| | || | || || ||| |||| || ||||| ||||| || |
Sbjct 45106 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGT 45165
Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTG-AGGGTGCTAATTTTCTCACGGCAGCA 186149
||||||| || || ||||| ||| || | | ||| ||| ||||| | || || |||
Sbjct 45166 GGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AATTTCTTAACCGCCGCA 45224
Query 186150 GTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 186209
|| || ||||||||| | | | | |||||| | | |||| ||||||||||| |
Sbjct 45225 GTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 45284
Query 186210 CAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 186269
||||||||| | | || |||| ||| | || || || |||| ||||| || ||||||
Sbjct 45285 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCAC 45344
Query 186270 GGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGG 186328
|| || || | || |||||||| ||| | || || |||||| | || ||| ||
Sbjct 45345 GGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGTGCGATCT-GTTCA 45403
Query 186329 TATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTAT 186367
| || || || ||||| || || || |||||||| ||
Sbjct 45404 ATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAAT 45442
>seq15646
Length=30608
Score = 141 bits (156), Expect = 1e-28
Identities = 225/320 (70%), Gaps = 2/320 (1%)
Strand=Plus/Minus
Query 185993 CCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTTTTCCCACTGCTTATATGGCAAT 186052
||| || || ||||| || ||||| || || | || ||||| ||| ||| | || |
Sbjct 24408 CCGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCTTT 24349
Query 186053 TGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTC 186112
|| || ||| |||| || ||||| ||||| || |||||||| || || |||||
Sbjct 24348 AGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGTGGTATACTCATGGATTGGCCAG 24289
Query 186113 TTCTTACCTTGAGGG-TGCTAATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTA 186171
||| || | || || ||| ||||| | || || ||||| || ||||||||| | |
Sbjct 24288 TTCCTATTTGGAAGGCTGC-AATTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTT 24230
Query 186172 TGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGT 186231
| | |||||| | | |||| ||||||||||| | ||||||||| | | || ||||
Sbjct 24229 TAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGT 24170
Query 186232 TCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTT 186291
||| | || || || |||| ||||| || |||||||| || || | || |||||||
Sbjct 24169 GTCAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCACGGCGCTTTCGGACTAATAGGTT 24110
Query 186292 TCATGCTGCGACAGTTTGAA 186311
| ||| | || || ||||||
Sbjct 24109 TTATGTTACGTCAATTTGAA 24090
>seq3386
Length=136654
Score = 140 bits (154), Expect = 4e-28
Identities = 388/592 (66%), Gaps = 26/592 (4%)
Strand=Plus/Minus
Query 183325 ATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCTCT 183384
|| || || || || ||||| ||| | | || || | || ||||||| ||| || | |
Sbjct 68000 ATTGATGGTATTCGTGAACCTGTTTTTAGATCTCTACTTTACGGAAACA-CATTATTTTT 67942
Query 183385 GGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAGCA 183444
||||| || ||| |||| || ||||| | || || || || |||| ||| |
Sbjct 67941 GGTGCCATTATTCTGACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTTAGAATCG 67882
Query 183445 GCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACTTC 183504
|||| | || || ||| | | || || |||| ||| | | | || || ||||||
Sbjct 67881 ACATCCGTTGACGAATGGTTATGCAATGGCGGTCTTTATGAGTTAATTGTTTTACACTTC 67822
Query 183505 CTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTATG 183564
| |||| || || || |||||||||| |||| ||||||
Sbjct 67821 TTACTTGGTGTAGCTTGTTATATGGGTCGTG------------------GTCTAGGTATG 67780
Query 183565 CGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCCTG 183624
|| ||||||| |||||| ||| | |||||||| ||||| ||| |||| ||| |
Sbjct 67779 CGCTATTGGATCGCTGTTGCATATTCAACTCCTGTTGCAGCTGCTACCACTGTTTTCTTA 67720
Query 183625 GTCTATCCTTTCGGTCAAGGTTCTTTTAG-TGATGGTATGCCCCTGGGTATCAGTGGCAC 183683
||||||| ||| |||||| |||| ||||||||||| ||| | ||| || ||
Sbjct 67719 ATCTATCCAATCGATCAAGGAAGTTTTTTCTGATGGTATGCTCCTAAGAATCTCTGTTAC 67660
Query 183684 CTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACAT 183743
|| || | ||| |||| ||||| || || | ||||| | |||||||| || |||||
Sbjct 67659 TTTCAATTTCATGGTTGTATTCCAGGCTGAAC---ACATCTTTATGCACCCATTTCACAT 67603
Query 183744 GCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 183803
| | | | ||| |||| |||| || || |||| || ||||| | |||| ||||
Sbjct 67602 GTTAAGCATAGCTAGTGTATTCGACAACTCCCTATTCAATGTTATGCATGATTCTTTGGT 67543
Query 183804 TACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGT 183862
|| | || | | | || | ||||||| | ||| | || | ||||||| |
Sbjct 67542 AACCT-CTAGTTTGATCAGGAAAACCACAAAAAATGAATTTATTAATGAAGGTTACAGAT 67484
Query 183863 TCGGTCAAGA-AGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTG 183913
|| ||||||| ||| | || || || || | ||||||||||| || ||||
Sbjct 67483 TCAGTCAAGAGGGAAAAAACTTATAATATCATAGCTGCTCATGGTTATTTTG 67432
>seq7459
Length=70955
Score = 109 bits (120), Expect = 7e-19
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 170991 GAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGT 171050
|| |||||||| ||| | || |||||||| ||||||||| |||| ||| ||||| ||
Sbjct 35499 GATGATCAATACATTTTGGACGCTGCTGAGGAAGCAGGAGTTGAATTGCCATATTCTTGC 35440
Query 171051 CGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCC 171110
| ||||| ||||| | || |||| |||||||| | |||||||| |||||||||
Sbjct 35439 AGGGCTGGAGCTTGCTGCACGTGTGTGGGGAAAATGGTTTCAGGTTCTGTGGATCAATCC 35380
Query 171111 GATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCA 171170
|| |||||||| ||||| | || || || |||| | |||||||| || ||
Sbjct 35379 GACGGTTCTTTCCTGGATGAAAAACAAATGGAGGATGGTTATGTGCTGACCTGTGTTTCG 35320
Query 171171 TATCC 171175
|||||
Sbjct 35319 TATCC 35315
>seq1658
Length=197311
Score = 100 bits (110), Expect = 4e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 170980 TTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGA 171039
||||| | |||| ||| |||| | | | ||||| || || ||||| ||| ||| ||
Sbjct 22924 TTGAAGTTCCTGATGATAAATACACTTTGGATGCAGCCGAGGAAGCTGGACCAGATCTGC 22865
Query 171040 ACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTG 171099
||||| ||| || || ||||| || |||||||| || || || | |||||||
Sbjct 22864 CTTATTCCTGTAAGGCCGGAGCTTGCTCCACCTGTGCCGGAAAGATGGTTTCAGGTTCTG 22805
Query 171100 TTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGA 171159
||||||||||||| || ||||| |||||| | || |||||| |||| | ||||
Sbjct 22804 TTGATCAATCCGACAGTTCCTTCCTCGATGATAAACAAATTGAAGGTGGTTATTTGCTGA 22745
Query 171160 CCTGCGTCTCATATCCTACAAGTGATTGTG 171189
| || || || || ||||| |||||||
Sbjct 22744 CTTGTGTTTCGTACCCTACCTCAGATTGTG 22715
>seq197
Length=406243
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 170979 TTTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTG 171038
|||||| || || |||||||| ||| | || || || || ||||||||| |||| |||
Sbjct 134932 TTTGAAGCCGCCGATGATCAATACATTTTGGACGCAGCCGAGGAAGCAGGAGTTGAATTG 134991
Query 171039 AACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCT 171098
||||| || | ||||| ||||| | || |||| |||||||| | ||||||
Sbjct 134992 CCATATTCTTGCAGGGCTGGAGCTTGCTGCACGTGTGTGGGGAAAATGGTTTCAGGTTCT 135051
Query 171099 GTTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTG 171158
|| ||||||||||| |||||||| ||||| | || || || |||| | |||
Sbjct 135052 GTGGATCAATCCGACGGCTCTTTCCTGGATGAAAAACAAATGGAGGATGGTTATGTGCTG 135111
Query 171159 ACCTGCGTCTCATATCC 171175
||||| || || || ||
Sbjct 135112 ACCTGTGTTTCGTACCC 135128
>seq7475
Length=70847
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 170994 GATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGT 171053
|| || || ||| | ||||| ||||| ||| |||| |||| ||| ||||| || |
Sbjct 70399 GACCAGTACATTTTGGATGCAGCTGAGGAAAAAGGAGTTGAATTGCCATATTCTTGCAGG 70458
Query 171054 GCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGAT 171113
||||| ||||| | || |||| |||||||| | |||||||| ||||||||||||
Sbjct 70459 GCTGGAGCTTGCTGCACATGTGTCGGGAAAATAGTTTCAGGTTCTGTGGATCAATCCGAT 70518
Query 171114 CAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCATAT 171173
|||||||| ||||| | || || || |||| | |||||||| || || ||
Sbjct 70519 GGCTCTTTCCTCGATGAAAAACAAATGGAGGATGGTTATGTGCTGACCTGTGTTTCGTAC 70578
Query 171174 CCTAC 171178
|| ||
Sbjct 70579 CCAAC 70583
>seq3176
Length=141053
Score = 89.7 bits (98), Expect = 6e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 170979 TTTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTG 171038
|||||| || || ||||| || ||| | ||||| ||||| || |||||| |||| |||
Sbjct 80511 TTTGAAGCCGCCGATGATCAGTACATTTTGGATGCAGCTGAGGAGGCAGGAGTTGAATTG 80570
Query 171039 AACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCT 171098
||||| || | ||||| ||||| | || |||| ||||| |||| |||||
Sbjct 80571 CCATATTCTTGCAGAGCTGGAGCTTGCTGCACGTGTGTCGGGAAGATTGTTTCAGGTTCC 80630
Query 171099 GTTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGA 171142
|| ||||||||||| |||||||| || || | || |||||
Sbjct 80631 GTGGATCAATCCGACGGTTCTTTCCTGGACGAAAAACAAATTGA 80674
>seq800
Length=269375
Score = 82.4 bits (90), Expect = 9e-11
Identities = 167/244 (68%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 186069 GGCACAACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG- 186127
|| |||| ||||| || |||||||| || || ||||| ||| || | || ||
Sbjct 152238 GGTACAATCTTTGTAACTTCGTGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGA 152297
Query 186128 TGCTAATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCT 186187
||| ||||| | || || |||| || ||||||||| | | | | |||||| | |
Sbjct 152298 TGC-AATTTCTTAACCGCCACAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATT 152356
Query 186188 TCTACTTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACT 186247
|||| ||||||||||| | ||||||||| | | || |||| ||| | || || |
Sbjct 152357 GTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTAT 152416
Query 186248 CTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTT 186307
|||| ||||| || ||||||| | || | || |||||||| ||| | | || ||
Sbjct 152417 GTGGACATTTGTTGC-TTCCACGGCACGTTAGGACTAATAGGTTTTATGTTACATCAATT 152475
Query 186308 TGAA 186311
||||
Sbjct 152476 TGAA 152479
>seq507
Length=329869
Score = 82.4 bits (90), Expect = 9e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 170980 TTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGA 171039
||||| | |||| |||||||| ||| | ||||| ||||| || || ||| | || |
Sbjct 97922 TTGAAGTTCCTGATGATCAATACATTTTGGATGCGGCTGAGGAGGCTGGACTAGACCTAC 97981
Query 171040 ACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTG 171099
||||| || || || ||||| || || |||||||| || || | ||||| |
Sbjct 97982 CTTATTCCTGCAAGGCCGGAGCTTGCTCCACATGTGCTGGAAAGATGGTTTCGGGTTCCG 98041
Query 171100 TTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGA 171159
| ||||||||||| || ||||| || ||| | || || ||| |||| | ||||
Sbjct 98042 TCGATCAATCCGACGGTTCCTTCCTCGACGATAAACAAATGGAAGACGGTTATTTGCTGA 98101
Query 171160 CCTGCGTCTCATATCCTACAAGTGATTGTG 171189
| || || || || ||||| |||||||
Sbjct 98102 CTTGTGTTTCGTACCCTACCTCAGATTGTG 98131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621467862610560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |