Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq109654 84.2 2e-11 >seq109654 Length=28343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 || || || || |||||||| || || || || || |||||| || ||| |||||||| Sbjct 19218 GACCAGCAGAGGCTTATCTTCGCTGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCCGAT 19159 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 |||||||| |||||||| || |||||||| ||||| Sbjct 19158 TACAATATCCAGAAGGAGTCGACTCTTCATCTGGTG 19123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427644429575780