Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq109206 264 1e-65 seq109654 149 6e-31 seq113932 134 1e-26 seq106905 134 1e-26 seq97232 134 1e-26 seq86460 134 1e-26 seq64237 131 2e-25 seq86116 118 1e-21 seq115941 105 7e-18 seq17851 96.9 4e-15 >seq109206 Length=27697 Score = 264 bits (292), Expect = 1e-65 Identities = 514/753 (68%), Gaps = 7/753 (1%) Strand=Plus/Minus Query 116604 GGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGG 116663 ||||| || ||||| || || |||||||| || ||| |||||||| |||||||||| Sbjct 8591 GGTTCTGTATGTTCCCGATTCAGTACCCGGAGATTTGGGAGATGTACAAGAAGGCCGAGG 8532 Query 116664 CGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCT 116723 | ||||||||||| | ||||||||||| || ||| | |||| | | | |||||| | Sbjct 8531 CCTCGTTCTGGACGGCGGAGGAGGTGGATCTCTCCCAAGACAATACCCAATGGGAGAACA 8472 Query 116724 TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACG 116783 ||| | | ||| || ||||| || || || || || || |||||| |||| Sbjct 8471 TGACTCCCGATGAGAAGCACTTCATTTCCCATGTTCTTGCTTTCTTTGCCGCCTCAGACG 8412 Query 116784 GCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGC 116843 ||||||| |||||||| | || | ||| ||||| | || || || ||||||| Sbjct 8411 GCATCGTTTTGGAGAATCTCGCCGGAAGGTTCATGAAGGAGATTCAAGTCGCGGAGGCGC 8352 Query 116844 GGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCC 116903 | ||| || || || |||||||| || ||||| | ||||| || ||||| | Sbjct 8351 GTGCCTTTTATGGGTTCCAGATCGCTATCGAGAATATTCACTCTGAGATGTACAGTCTCT 8292 Query 116904 TCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGA 116963 | | || || ||| | ||| |||||| ||| | || |||||||||||| Sbjct 8291 TGTTGGAGACTTACATTAAAGACCCGGCTGAGAAGAACCGCCTCTTTCACGCCATCGAGA 8232 Query 116964 CGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGG 117023 | || || || || ||||||| ||||||| || | ||||||| |||| ||| Sbjct 8231 CCATTCCTTGTGTGGCCAAGAAGGCTCAGTGGGCCATGAGGTGGATCGACGGCTCAGAAT 8172 Query 117024 CCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCA 117083 | |||| ||||| || | || ||||| ||||||||| ||||||| || || | Sbjct 8171 CT---TTCGCGGAGCGGTTGATCGCGTTCGCCTGCGTCGAGGGGATCTTCTTCTCCGGAA 8115 Query 117084 GTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCA 117143 | ||| ||| ||||||||||| ||||||||||| | ||||| || || || ||| | Sbjct 8114 GCTTCTGCGCGATATTTTGGCTAAAGAAACGCGGGTTGATGCCGGGTCTCACGTTCTCTA 8055 Query 117144 ACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGC 117203 ||||| | || || | || || || | || ||||| || || |||||||| | || || Sbjct 8054 ACGAGTTGATATCGCGAGATGAAGGGTTACACTGCGATTTCGCGTGTTTGCTTTACACGC 7995 Query 117204 ATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCA 117263 | || | || | ||||| || ||| ||||||| ||| || ||| || || | | Sbjct 7994 TTCTGAAGAAGAAGCTGAGCGAGGAGCGAGTCAGGGGAATCATCCGCGATGCCGTTGATA 7935 Query 117264 TCGAGCAGCGCTTCCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAA 117322 ||||| | ||| || || || ||||| |||||| || |||| | || | || Sbjct 7934 TCGAGAGGGAGTTCGTCTGTGATGCTCTGCCTTGTGCGT-TGGTGGGTATGAACGGTGAT 7876 Query 117323 ACGATGTCGCAA-TACATCGAGTTCGTCGCCGA 117354 |||| |||| || ||||||||||| || || Sbjct 7875 CTTATGT-GCAAGTATATCGAGTTCGTGGCTGA 7844 >seq109654 Length=28343 Score = 149 bits (164), Expect = 6e-31 Identities = 161/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || ||||| ||||| || || ||||||||| | || ||||| | || Sbjct 18420 ATGCAGATATTTGTGAAAACCCTCACCGGGAAGACCATCACCCTTGAGGTCGAGAGCTCC 18361 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||||| | ||||| ||||| || ||| | ||||| Sbjct 18360 GACACAATCGACAACG-TCAAGGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCA 18302 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || |||||||| || |||| || ||||| ||||||||| Sbjct 18301 GCAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGACGGCCGTACCCTTGCCGACTACAA 18242 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || || ||| | ||| Sbjct 18241 CATCCAGAAGGAGTCGACTCTCCATTTGGTG 18211 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || ||||||||| |||| || ||| | | Sbjct 18192 ATGCAGATCTTTGTCAAGACCCTCACAGGGAAGACCATCACCCTCGAGGTGGAAAGCTCA 18133 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| ||||| ||||| || ||| | ||||| Sbjct 18132 GACACAATCGACAACGTT-AAGGCTAAGATTCAGGACAAGGAGGGAATTCCCCCAGACCA 18074 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| || || ||| |||| || | || ||||| |||||||| Sbjct 18073 GCAACGTCTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACCCTTGCTGACTACAA 18014 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| | || ||||| | ||| | || |||||||| || Sbjct 18013 CATTCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGTTTGAGGGGTGG 17966 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || ||||| || || Sbjct 18648 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCCTCC 18589 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || |||||| | ||||| Sbjct 18588 GACACCATCGACAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGGATCCCCCCAGACCA 18530 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||||| || |||| || |||||| || ||||| Sbjct 18529 GCAGAGGCTGATCTTCGCCGGAAAGCAGCTTGAGGACGGACGTACCCTCGCTGATTACAA 18470 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| || || Sbjct 18469 CATCCAGAAGGAGTCCACACTCCA 18446 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || || || || |||||||| |||| ||||| | Sbjct 19335 AATATGCAGATCTTCGTCAAAACCCTAACCGGTAAGACCATCACTCTCGAGGTCGAGAGC 19276 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | | |||| || |||| ||||| ||||| ||||| ||||| Sbjct 19275 TCCGACACCATCGACAATGTTAAGGCCAAGATTCAAGACAAGGAGGGGATCCCTCCGGAC 19216 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || |||| ||| || || ||||| || || | | ||||| ||| ||| Sbjct 19215 CAGCAGAGGCTTATCTTCGCTGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCCGATTAC 19156 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || |||||||||||| | || || ||||| ||| Sbjct 19155 AATATCCAGAAGGAGTCGACTCTTCATCTGGTG 19123 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || ||||||||||||||||| | || || || | | Sbjct 17964 ATGCAAATCTTCGTGAAGACCCTTACGGGCAAAACCATCACTTTGGAGGTGGAGAGCTCT 17905 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||| | ||||| || |||||||| | |||||| Sbjct 17904 GACACAATTGATAATGTAAAGGCTAAAATCCAGGACAAGGAAGGCATCCCACCAGACCAG 17845 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || || || || |||| |||| ||||| || || |||||| Sbjct 17844 CAGCGTCTCATCTTTGCAGGGAAGCAATTGGAGGACGGTCGCACTCTTGCTGATTACAAC 17785 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||||||| | || || || || || Sbjct 17784 ATTCAGAAGGAGTCTACCCTTCACCTTGT 17756 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || || ||||| |||| |||||| | || Sbjct 18876 ATGCAGATCTTCGTTAAGACTTTGACCGGAAAGACGATCACGCTCGAAGTCGAATCATCC 18817 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||| | || || | ||||| || || || ||| | ||||| Sbjct 18816 GACACCATCGACAACG-TCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 18758 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || ||||| || || | || |||||| ||||||||| Sbjct 18757 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGAACCCTCGCCGACTACAA 18698 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| ||||||||| |||| || ||||| ||| Sbjct 18697 CATTCAGAAGGAGTCCACCCTTCATCTGGTG 18667 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || ||||| || || Sbjct 19104 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCCTCC 19045 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||||| || || | ||||| || ||||| || |||| || Sbjct 19044 GATACCATTGACAACG-TCAAGGCTAAGATACAGGACAAGGAAGGCATTCCTCCGGATCA 18986 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || ||||| || || | || |||||| ||| ||||| Sbjct 18985 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGATTACAA 18926 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| || || Sbjct 18925 CATCCAGAAGGAGTCCACCCTTCA 18902 >seq113932 Length=32622 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| |||||||| ||| | || || || | || Sbjct 27414 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 27473 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||||||||| |||||||| Sbjct 27474 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 27533 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || |||| || ||||| || |||||| Sbjct 27534 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 27593 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || | ||||| || Sbjct 27594 ATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 27640 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| |||||||| ||| | || || || | | Sbjct 19333 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCT 19392 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||||||||| |||||||| Sbjct 19393 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 19452 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || |||| || ||||| || |||||| Sbjct 19453 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 19512 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || | ||||| || Sbjct 19513 ATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 19559 >seq106905 Length=25706 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| |||||||| ||| | || || || | || Sbjct 9324 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 9383 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||||||||| |||||||| Sbjct 9384 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 9443 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || |||| || ||||| || |||||| Sbjct 9444 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 9503 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || | ||||| || Sbjct 9504 ATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 9550 >seq97232 Length=18783 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| |||||||| ||| | || || || | || Sbjct 12514 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 12455 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||||||||| |||||||| Sbjct 12454 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 12395 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || |||| || ||||| || |||||| Sbjct 12394 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 12335 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || | ||||| || Sbjct 12334 ATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 12288 >seq86460 Length=13305 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| |||||||| ||| | || || || | || Sbjct 11860 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 11919 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||||||||| |||||||| Sbjct 11920 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 11979 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || |||| || ||||| || |||||| Sbjct 11980 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 12039 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || | ||||| || Sbjct 12040 ATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 12086 >seq64237 Length=5233 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| |||||||| ||| | || || || | | Sbjct 3316 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCT 3257 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||||||||| |||||||| Sbjct 3256 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 3197 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || |||| || ||||| || |||||| Sbjct 3196 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 3137 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || | ||| | || | ||||| || Sbjct 3136 ATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 3090 >seq86116 Length=13258 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || |||||||||||| | || |||||| | || Sbjct 3617 ATGCAAATCTTTGTCAAAACCCTTACTGGAAAAACCATCACCTTGGAGGTCGAAAGCTCC 3558 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| || || ||||| | ||||| Sbjct 3557 GACACAATTGACAACG-TCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCACCAGACCA 3499 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | ||| ||||| ||||| || |||| || || || ||| ||||| Sbjct 3498 GCAGAGATTGATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTGCCGATTACAA 3439 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| || |||| || || Sbjct 3438 CATCCAGAAAGAATCCACCCTTCA 3415 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || |||||||||||| | || || ||| | | Sbjct 2933 ATGCAAATCTTTGTGAAGACCTTGACTGGGAAAACCATCACCCTTGAAGTTGAAAGCTCG 2874 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | |||| || || | || || ||||| |||||| | |||||| Sbjct 2873 GATACCATCGACAATGTTAAGGCGAAGATCCAAGATAAGGAGGGTATCCCCCCAGACCAG 2814 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| ||||| || |||| | | ||||| ||||||||| Sbjct 2813 CAGCGGTTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGAGGACCCTTGCTGACTACAAC 2754 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 2753 ATCCAGAAGGAGTCCACTCTACA 2731 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || |||||||| || | || |||||| || Sbjct 3161 ATGCAAATTTTTGTGAAGACCCTTACCGGGAAAACCATTACTTTGGAAGTCGAAAGTTCC 3102 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | || | || || | ||||| ||||| ||||| | |||||| Sbjct 3101 GATACAATTGACAATGTGAAAGCTAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAG 3042 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | ||||| | || ||||| ||||| || || | || ||| | |||||| ||| Sbjct 3041 CAAAGGCTCATTTTTGCTGGCAAGCAGCTCGAGGATGGACGAACCTTGGCCGACTATAAC 2982 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || || || | |||||||| Sbjct 2981 ATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCG 2947 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || |||||||||||| | || || ||| | | Sbjct 3389 ATGCAAATTTTTGTTAAGACACTCACCGGGAAAACCATCACCCTTGAGGTGGAAAGCTCA 3330 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| || |||| ||||| ||||| || ||| | |||||| Sbjct 3329 GATACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 3270 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| || || || || || || | || ||||| ||| || ||| Sbjct 3269 CAGAGGTTGATCTTCGCTGGTAAGCAACTCGAGGATGGCCGGACCCTTGCCGATTATAAC 3210 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||| || |||| || || Sbjct 3209 ATTCAGAAAGAATCCACCCTTCA 3187 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || || || || ||| | || || || | | Sbjct 2705 ATGCAAATTTTTGTCAAGACCTTGACTGGGAAGACTATTACCTTGGAGGTTGAGAGCTCA 2646 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || |||| ||||| |||||||| || | |||||| Sbjct 2645 GACACAATTGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 2586 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | ||| || || |||||||| || | | | ||||| |||||||| Sbjct 2585 CAGAGGCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGGAGGACCCTGGCGGACTACAAT 2526 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || ||||| || || Sbjct 2525 ATCCAGAAGGAGTCTACCCTGCACCTTGT 2497 >seq115941 Length=36387 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| ||||| || |||||||| || | || || || | | Sbjct 5348 ATGCAAATCTTTGTCAAAACCCTCACTGGAAAAACCATAACTTTGGAGGTGGAGAGCTCG 5289 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | || | || |||| ||||| |||||||||||| | |||||| Sbjct 5288 GACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCAG 5229 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || || | | | || ||| || |||||| Sbjct 5228 CAGCGGCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGGAGAACTCTCGCTGATTACAAC 5169 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| | || || || Sbjct 5168 ATTCAGAAGGAGTCTACCCTCCA 5146 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| ||||| || || |||||||| | || ||||| | | Sbjct 5576 ATGCAAATCTTCGTCAAAACTCTCACCGGAAAGACCATCACTTTGGAGGTCGAGAGCTCG 5517 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | || |||| || || |||||||| ||| | ||||| Sbjct 5516 GACACCATCGACAACG-TGAAAGCTAAGATTCAAGATAAGGAGGGCATTCCCCCAGACCA 5458 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || || || || || | || || ||| |||||||| Sbjct 5457 GCAGAGGTTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGGACACTCGCAGACTACAA 5398 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| |||||| | || || || Sbjct 5397 CATCCAAAAGGAGTCGACCCTTCA 5374 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || || ||||| |||||||||||| |||| ||||| | | Sbjct 4893 AATGCAAATTTTTGTGAAGACCCTTACGGGAAAAACCATCACCCTCGAGGTCGAGAGCTC 4834 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | |||| ||||||| ||||| ||||| || ||| ||||||| Sbjct 4833 TGATACAATTGACAATGTAAAGGCGAAAATTCAAGACAAGGAGGGAATTCCCCCGGACCA 4774 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | | || | || || || || |||| || | | || || || ||||| Sbjct 4773 ACAGAGGTTGATTTTTGCTGGGAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAA 4714 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || || || || ||| |||| ||||||| ||| Sbjct 4713 CATCCAGAAGGAATCAACCCTTCACCTTGTGCTGCGTCTGAGGGGTGGC 4665 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || || |||||||| | || || || | | Sbjct 4664 ATGCAGATCTTTGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTGGAGAGCTCG 4605 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| |||||||| ||||||||||||||||| |||||||| Sbjct 4604 GATACCATTGATAATGTCAAGGCAAAAATTCAAGACAAAGAGGGCATCCCACCGGACCAG 4545 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | ||| || |||||| |||| || | | || | ||||| ||| Sbjct 4544 CAGAGGTTAATTTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTTTGGCTGACTATAAC 4485 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||||||| |||| || || || || Sbjct 4484 ATTCAGAAGGAGTCCACTCTTCACCTTGT 4456 >seq17851 Length=1283 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| ||||||| || || | |||| ||| ||||| ||||| || Sbjct 1200 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCTTGATCTTCGCCGGCAAGCAGCTTGAG 1141 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | || || || |||||||||||||||||||||| |||| || || || ||| | Sbjct 1140 GATGGCCGTACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 1081 Query 40903 CGC 40905 ||| Sbjct 1080 CGC 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514366022765760