Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq113932 123 3e-23 seq106905 123 3e-23 seq97232 123 3e-23 seq86460 123 3e-23 seq109654 118 1e-21 seq64237 118 1e-21 seq115941 113 5e-20 seq86116 96.9 4e-15 seq7290 93.3 5e-14 seq132415 82.4 9e-11 seq132405 82.4 9e-11 seq118474 82.4 9e-11 seq97166 82.4 9e-11 seq68438 82.4 9e-11 seq3067 82.4 9e-11 >seq113932 Length=32622 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | |||||| || | || |||||| || || |||||||| || Sbjct 27641 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 27582 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 27581 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 27522 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| | | | |||||| || || || Sbjct 27521 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 27462 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| |||||||| || || || ||||| ||||| Sbjct 27461 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 27414 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | |||||| || | || |||||| || || |||||||| || Sbjct 19560 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 19501 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 19500 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 19441 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| | | | ||||| || || || Sbjct 19440 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAAC 19381 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| |||||||| || || || ||||| ||||| Sbjct 19380 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 19333 >seq106905 Length=25706 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | |||||| || | || |||||| || || |||||||| || Sbjct 9551 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 9492 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 9491 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 9432 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| | | | |||||| || || || Sbjct 9431 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 9372 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| |||||||| || || || ||||| ||||| Sbjct 9371 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 9324 >seq97232 Length=18783 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | |||||| || | || |||||| || || |||||||| || Sbjct 12287 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 12346 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 12347 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 12406 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| | | | |||||| || || || Sbjct 12407 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 12466 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| |||||||| || || || ||||| ||||| Sbjct 12467 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 12514 >seq86460 Length=13305 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | |||||| || | || |||||| || || |||||||| || Sbjct 12087 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 12028 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 12027 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 11968 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| | | | |||||| || || || Sbjct 11967 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 11908 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| |||||||| || || || ||||| ||||| Sbjct 11907 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 11860 >seq109654 Length=28343 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| ||||| || |||| || | ||||| || || || Sbjct 17773 CTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGACCGTCCTCCAATTGCTTCCCTGCAAA 17832 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| |||||| || | | Sbjct 17833 GATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGGATTTTAGCCTTTACATT 17892 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | ||||||||||||||||| || ||||| Sbjct 17893 ATCAATTGTGTCAGAGCTC---TCCACCTCCAAAGTGATGGTTTTGCCCGTAAGGGTCTT 17949 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 17950 CACGAAGATTTGCAT 17964 Score = 105 bits (116), Expect = 8e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | |||| |||||| || || ||||||||||| || || || | Sbjct 18433 ACGAAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTACGTCC 18492 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| || || | ||||||||| | || | | ||||| Sbjct 18493 GTCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTT 18552 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || |||| ||| | | | |||||| || || || || | |||| Sbjct 18553 GTCCTGGATCTTAGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGA 18611 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || | ||||| || ||||| ||||| Sbjct 18612 TGGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 18648 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | ||||||||| | || |||||| || || ||||| || || Sbjct 18194 CCTCCACGGAGACGAAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 18253 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || |||| || ||||| || |||||||| ||||| ||||||||||| | || Sbjct 18254 AGGGTACGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 18313 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||||||| |||||| |||| ||| | | | ||||| |||| || Sbjct 18314 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCGATTGTGTCGGAGCTC---TC 18369 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || || || || || || ||||| || ||||| Sbjct 18370 GACCTCAAGGGTGATGGTCTTCCCGGTGAGGGTTTTCACAAATATCTGCAT 18420 Score = 93.3 bits (102), Expect = 5e-14 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||| | || |||||| || ||||||||||| ||||| || | | || || Sbjct 19123 CACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTTCTGCCATCTTC 19182 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| |||||||| || || | ||||||||| | || | | |||||||| | | Sbjct 19183 GAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCCTCCTTGT-CTT 19241 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 || | || | | | | | | | | ||||| |||| || || |||| ||||||| Sbjct 19242 GAATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAGTGATGG 19298 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | || || ||||| || || || ||||| ||||| || Sbjct 19299 TCTTACCGGTTAGGGTTTTGACGAAGATCTGCATATT 19335 >seq64237 Length=5233 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | |||||| || | || |||||| || || |||||||| || Sbjct 3089 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 3148 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 3149 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 3208 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| | | | ||||| || || || Sbjct 3209 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCAAC 3268 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| |||||||| || || || ||||| ||||| Sbjct 3269 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 3316 >seq115941 Length=36387 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| ||||| | | | || || |||||||| |||||||| Sbjct 5157 CTCCTTCTGAATGTTGTAATCAGCGAGAGTTCTCCCATCCTCAAGCTGCTTTCCAGCGAA 5216 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | || |||||||| | ||| | || | ||| | Sbjct 5217 GATAAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTGT-CTTGAATCTTGGCTTTCACAT 5275 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | || |||||||| || || || || | Sbjct 5276 TGTCAATGGTGTCCGAGCTC---TCCACCTCCAAAGTTATGGTTTTTCCAGTGAGGGTTT 5332 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||||||||| Sbjct 5333 TGACAAAGATTTGCAT 5348 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || || || ||||| | || || || ||||| |||||||| Sbjct 5385 CTCCTTTTGGATGTTGTAGTCTGCGAGTGTCCGGCCATCCTCAAGTTGCTTTCCAGCGAA 5444 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | || |||||| || ||| | || | || ||| Sbjct 5445 GATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCT-TGAATCTTAGCTTTCACGT 5503 Query 43112 CGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | |||||||| || || || || || | Sbjct 5504 TGTCGATGGTGTCCGAGCTC---TCGACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTTT 5560 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 5561 TGACGAAGATTTGCAT 5576 >seq86116 Length=13258 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| || || || || |||||||| || ||||| || |||| || Sbjct 3409 ACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGCAAGAGTACGGCCGTCCTCA 3468 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| || | || ||||||||| | || | | |||||||| || Sbjct 3469 AGCTGCTTGCCAGCGAAAATCAATCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCT-TG 3527 Query 43095 ATTTTTTGT-TTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 | | || | |||| ||| | || |||||| ||| || || | |||||||||| Sbjct 3528 AATCTTGGCCTTGA-CGTTGTCAATTGTGTCGGAGCTTTCGACCTCCAAGGTGATGGTTT 3586 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || || || |||||||||||||| Sbjct 3587 TTCCAGTAAGGGTTTTGACAAAGATTTGCAT 3617 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| ||| || ||||| ||||||||||| || || || | Sbjct 3630 ACGGAGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCAAGGGTGCGACC 3689 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || || || | |||||||| | || | | |||||| Sbjct 3690 ATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGGATACCCTCCTT 3749 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | |||||| |||||| || | ||||| Sbjct 3750 GTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGAT 3809 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || || || || |||||||| ||||| Sbjct 3810 AGTTTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 3845 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || |||||| || || || || || |||| || || | Sbjct 2946 ACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCCAAGGTTCGTCC 3005 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || ||||| | |||||||| | ||| | | |||||| Sbjct 3006 ATCCTCGAGCTGCTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGGATACCCTCCTT 3065 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || ||| | | | | || ||| ||| || || | || || Sbjct 3066 GTCCTGGATCTTAGCTTTCACATTGTCAATTGTATCGGAACTTTCGACTTCCAAAGTAAT 3125 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||| || || || ||||| ||||| |||||||| Sbjct 3126 GGTTTTCCCGGTAAGGGTCTTCACAAAAATTTGCAT 3161 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || ||||| |||| | | || || ||||||||||||||||| Sbjct 2514 CTCCTTCTGGATATTGTAGTCCGCCAGGGTCCTCCCATCCTCCAGCTGCTTACCAGCGAA 2573 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 || || | ||||||||| | || | || |||||||||| Sbjct 2574 AATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 2613 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| || || ||||| || ||||| || || ||||| | || || Sbjct 3181 ACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAATCGGCAAGGGTCCGGCCATCCTCG 3240 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || |||||||||||||| || | | ||||||||| | || | | |||||||||| || Sbjct 3241 AGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC-TG 3299 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | | || | |||| | | | || || ||| |||||| || | |||||||| Sbjct 3300 AATCTTGGCCTTGACATTGTCAATGGTATCTGAGCT---TTCCACCTCAAGGGTGATGGT 3356 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || ||||| ||||| |||||||| Sbjct 3357 TTTCCCGGTGAGTGTCTTAACAAAAATTTGCAT 3389 >seq7290 Length=1086 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| |||||| ||||||||||||| ||||| |||||| Sbjct 156 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCGCGCGTGACAGGCGCGGATACTGACCACT 97 Query 60125 ATACTACCGAGGAT 60138 |||||||||||||| Sbjct 96 ATACTACCGAGGAT 83 >seq132415 Length=171784 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||||||| || | || || ||| ||||||||| |||| |||||||||||||||| | Sbjct 111682 ATGAAAAAATTACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAA 111741 Query 60114 TACTCACCACTATACTAC 60131 |||| ||||||||||||| Sbjct 111742 TACTTACCACTATACTAC 111759 >seq132405 Length=149238 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 39112 AAAAAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 39053 Query 60117 TCACCACTATACTAC 60131 | ||||||||||||| Sbjct 39052 TTACCACTATACTAC 39038 >seq118474 Length=38765 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||||||| || | || || ||| ||||||||| |||| |||||||||||||||| | Sbjct 29162 ATGAAAAAATTACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAA 29221 Query 60114 TACTCACCACTATACTAC 60131 |||| ||||||||||||| Sbjct 29222 TACTTACCACTATACTAC 29239 >seq97166 Length=19460 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| |||| || || ||| ||||||||| |||| |||||||||||||||| | Sbjct 17393 ATTAAAAAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAA 17334 Query 60114 TACTCACCACTATACTAC 60131 |||| ||||||||||||| Sbjct 17333 TACTTACCACTATACTAC 17316 >seq68438 Length=6389 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 6180 AAAAAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 6121 Query 60117 TCACCACTATACTAC 60131 | ||||||||||||| Sbjct 6120 TTACCACTATACTAC 6106 >seq3067 Length=1036 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||||| | || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 994 AAAAATTTGCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 935 Query 60117 TCACCACTATACTAC 60131 | ||||||||||||| Sbjct 934 TTACCACTATACTAC 920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570870698645280