Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq115941 86.0 9e-12 >seq115941 Length=36387 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || || ||||| | |||||| |||| ||| || ||||| || |||||||||||||| || Sbjct 4711 ATGTTGTAATCCGCAAGAGTCCTGCCATCCTCCAATTGCTTCCCAGCAAAAATCAACCTC 4770 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || || ||||| |||||||| || || ||||| Sbjct 4771 TGTTGGTCCGGGGGAATTCCCTCCTTGTCTTG 4802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742295157457920