Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq109654 111 1e-19 seq113932 107 1e-18 seq106905 107 1e-18 seq97232 107 1e-18 seq86460 107 1e-18 seq86116 104 2e-17 seq64237 104 2e-17 seq115941 86.0 4e-12 >seq109654 Length=28343 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | ||| || ||||| ||||||||||||| || |||| |||| Sbjct 18209 AGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCC 18268 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| || || ||||| ||||| ||||||||||| ||| | | ||||||||| Sbjct 18269 TCGAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTC- 18327 Query 34298 GCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 || ||||| ||| | | | | || | |||| ||||| || | ||||||| Sbjct 18328 -CTGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGG 18386 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||||||| ||||||||||| |||||||| Sbjct 18387 TCTTCCCGGTGAGGGTTTTCACAAATATCTGCAT 18420 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| |||||||| || | || || ||||| ||||||||||||| Sbjct 18650 CCACCACGGAGCCTTAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 18709 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||| || || || || | || ||||||||| ||| Sbjct 18710 AGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 18769 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||| || ||||| | | | | || | |||| |||||||| Sbjct 18770 ATTCCTTCCTTGTCCTGGATC-TTGGCTTTGACGTTGTCGATGGTGTCGGATGATTCGAC 18828 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || ||||| | ||| || || ||||||||||| Sbjct 18829 TTCGAGCGTGATCGTCTTTCCGGTCAAAGTCTTAACGAAGATCTGCAT 18876 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| |||||||| || | ||| || ||||| || ||||| |||| | Sbjct 19106 CCACCACGGAGCCTGAGCACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCGGCC 19165 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | | || || | |||||| || ||||| || |||| ||||||||| || Sbjct 19166 AGGGTTCTGCCATCTTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGAGGG 19225 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | |||| ||||| Sbjct 19226 ATCCCCTCCTTGTCTTGAATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGACC 19285 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || ||||| || ||||| || ||||||||||| Sbjct 19286 TCGAGAGTGATGGTCTTACCGGTTAGGGTTTTGACGAAGATCTGCAT 19332 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | || || ||||| ||||||||||| | || |||| | || Sbjct 17981 AGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCC 18040 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||||||||| || ||||| || || || |||||||| ||| | | ||||||||| Sbjct 18041 TCCAACTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCTGGGGGAATTCCCTCCTTGTCC 18100 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | ||| || || | |||||||| Sbjct 18101 TGAATCTTAGCCTTAACGTTGTCGATTGTGTCTGAGCTTTCCACCTCGAGGGTGATGGTC 18160 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || || |||||||||||||| Sbjct 18161 TTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 18192 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | || || ||||| |||||||| |||| Sbjct 18878 CCACCACGGAGCCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCG 18937 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||| || || || || | || |||||| || || Sbjct 18938 AGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGA 18997 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| |||||| ||| | | | | || | ||||| || ||||| Sbjct 18998 ATGCCTTCCTTGTCCTGTATCTTAGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACC 19057 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || ||||| | || || || ||||||||||| Sbjct 19058 TCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 19104 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| |||||||| || | || || |||| Sbjct 17753 AGAACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGACCGTCC 17812 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||| ||||| ||||| || ||||| ||||||||||| || | || |||||||| Sbjct 17813 TCCAATTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCC 17872 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TTCGACGTCCACCGTGAT 34353 || || ||||| || |||| | | ||| || || || |||| ||||| Sbjct 17873 TGGATTTTAGCCTTTACAT----TATCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGAT 17928 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||||||| || || || ||||| ||||| |||||| Sbjct 17929 GGTTTTGCCCGTAAGGGTCTTCACGAAGATTTGCATC 17965 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||| ||| | || || ||||| |||||||| || | Sbjct 18422 CCGCCACGGAGACGAAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCG 18481 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| || |||| ||||||||| ||| Sbjct 18482 AGGGTACGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGG 18541 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 18542 ATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 18601 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || || | || || || ||||||||||| Sbjct 18602 TCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 18648 >seq113932 Length=32622 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || ||||| |||||||| || | || ||| |||| Sbjct 27625 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 27566 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 27565 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 27506 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| || || || || | || |||||| Sbjct 27505 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 27446 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| ||||||||||| Sbjct 27445 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 27414 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || ||||| |||||||| || | || ||| |||| Sbjct 19544 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 19485 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 19484 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 19425 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | || || || || | || |||||| Sbjct 19424 TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAACCTCTAGGGTTATGGTT 19365 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| ||||||||||| Sbjct 19364 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 19333 >seq106905 Length=25706 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || ||||| |||||||| || | || ||| |||| Sbjct 9535 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 9476 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 9475 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 9416 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| || || || || | || |||||| Sbjct 9415 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 9356 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| ||||||||||| Sbjct 9355 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 9324 >seq97232 Length=18783 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || ||||| |||||||| || | || ||| |||| Sbjct 12303 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 12362 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 12363 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 12422 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| || || || || | || |||||| Sbjct 12423 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 12482 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| ||||||||||| Sbjct 12483 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 12514 >seq86460 Length=13305 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || ||||| |||||||| || | || ||| |||| Sbjct 12071 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 12012 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 12011 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 11952 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| || || || || | || |||||| Sbjct 11951 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 11892 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| ||||||||||| Sbjct 11891 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 11860 >seq86116 Length=13258 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| |||||||| |||| || |||| |||| || | ||||||||| ||||| Sbjct 3426 TTCTTTCTGGATGTTGTAATCGGCAAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 3485 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| | | ||||||||| || | | |||||||| ||||| ||| | | Sbjct 3486 AATCAATCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTT 3545 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| |||||| |||| ||||||||||| || || || ||||| || Sbjct 3546 GTCAATTGTGTCGGAGCTTTCGACCTCCAAGGTGATGGTTTTTCCAGTAAGGGTTTTGAC 3605 Query 34378 AAAGATCTGCAT 34389 |||||| ||||| Sbjct 3606 AAAGATTTGCAT 3617 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||| ||||| ||| || ||||| ||||||||||| | Sbjct 2707 CCCCCACGCAGACGCAGTACCAAGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCA 2766 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | |||| || | ||||||||| || || || | |||||||||||| ||| Sbjct 2767 AGGGTCCTCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGGG 2826 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | || | | || | ||| | ||| || Sbjct 2827 ATACCCTCCTTATCTTGGATCTTCGCCTTAACATTGTCGATGGTATCCGAGCTTTCAACT 2886 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||||||||| || || | || ||||||||||| |||||| Sbjct 2887 TCAAGGGTGATGGTTTTCCCAGTCAAGGTCTTCACAAAGATTTGCATC 2934 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | ||| |||||||| |||||||| || | || || | || Sbjct 3634 AGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCT 3693 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || || |||| |||||||| || | | ||||||||| Sbjct 3694 TCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGGATACCCTCCTTGTCT 3753 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | |||| ||| || || | ||||| ||| Sbjct 3754 TGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTT 3813 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || ||||| |||||||||||||||||||||||| Sbjct 3814 TTTCCGGTAAGAGTTTTCACAAAGATCTGCATC 3846 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| ||||| || |||| || ||| | || || | ||||| || ||||| Sbjct 3198 TTCTTTCTGAATGTTATAATCGGCAAGGGTCCGGCCATCCTCGAGTTGCTTACCAGCGAA 3257 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | || ||||||||| ||| | | ||||||||| ||||| ||| | || Sbjct 3258 GATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATT 3317 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | ||| | ||| || || | ||||||||||| |||||||| || || || Sbjct 3318 GTCAATGGTATCTGAGCTTTCCACCTCAAGGGTGATGGTTTTCCCGGTGAGTGTCTTAAC 3377 Query 34378 AAAGATCTGCAT 34389 ||| || ||||| Sbjct 3378 AAAAATTTGCAT 3389 >seq64237 Length=5233 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || ||||| |||||||| || | || ||| |||| Sbjct 3105 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 3164 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 3165 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 3224 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | || || || || | || |||||| Sbjct 3225 TGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCTAGGGTTATGGTT 3284 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| ||||||||||| Sbjct 3285 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 3316 >seq115941 Length=36387 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | |||||| ||||| | || ||| ||||| |||||||| || | Sbjct 4666 CCACCCCTCAGACGCAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCCGCA 4725 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | | || ||||| ||||| || || ||||| | || ||| ||||| ||| Sbjct 4726 AGAGTCCTGCCATCCTCCAATTGCTTCCCAGCAAAAATCAACCTCTGTTGGTCCGGGGGA 4785 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| || || ||||| || | | || | ||| | ||||| Sbjct 4786 ATTCCCTCCTTGTCTTGAATTTTCGCCTTTACATTGTCAATTGTATCAGAGCTCTCGACC 4845 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| || || || || |||||||| || ||||| Sbjct 4846 TCGAGGGTGATGGTTTTTCCCGTAAGGGTCTTCACAAAAATTTGCAT 4892 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| || ||||| |||||||| || | || | | || Sbjct 5137 AGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCGAGAGTTCTCCCATCC 5196 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || |||||||||||||| ||| | || ||||||||| Sbjct 5197 TCAAGCTGCTTTCCAGCGAAGATAAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 5256 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| || ||||| | || | | || | || | || || |||| || ||||| Sbjct 5257 TGAATC-TTGGCTTTCACATTGTCAATGGTGTCCGAGCTCTCCACCTCCAAAGTTATGGT 5315 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| || ||||| ||||| |||||||| ||||| Sbjct 5316 TTTTCCAGTGAGGGTTTTGACAAAGATTTGCAT 5348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322550383698560