Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq116532 95.1 1e-14 >seq116532 Length=35955 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| ||||||||||| || || || ||||||||| |||||| || ||||| ||||| || Sbjct 9718 ACAAGCAAAATCACAGTGGAGTCCTTCATCTCTAGAAATAAGCTCATTTGAGAATGTCAA 9659 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 |||||||| ||||| | ||||| | ||| ||||||||| Sbjct 9658 GCCTGGCATTAATCCCCTCTTTTTAAGCCAGAATATTGCA 9619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481546859803680