Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq26752 205 8e-48 seq109206 181 9e-41 seq109654 102 7e-17 seq113932 100 3e-16 seq106905 100 3e-16 seq97232 100 3e-16 seq86460 100 3e-16 seq86116 96.9 3e-15 seq64237 95.1 1e-14 seq115941 91.5 1e-13 >seq26752 Length=1779 Score = 205 bits (226), Expect = 8e-48 Identities = 349/501 (70%), Gaps = 10/501 (2%) Strand=Plus/Plus Query 23483 GCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTT 23542 || || || | ||| ||||| ||||| |||||||| || || ||||||||||| || | Sbjct 1 GCACCTGGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGAGCGGTGTTGTTGTAGACACGA 60 Query 23543 AGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA-CACTCGAA---CCTTT 23598 ||||| ||||||||||||||||| | ||| | |||| || | || || | Sbjct 61 AGCATGGGCACGAGACCGTTGGAAGTGCC----ATTGGTGCCACCAATGTAAGCGCCAGT 116 Query 23599 TGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCA 23658 || |||| | |||| || || ||| || || || | || || ||||| ||||| Sbjct 117 GGCACGAATGCGGTGAGTGTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGCGCA 176 Query 23659 TTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACA 23718 || ||||| |||||||| ||||| |||||||| || || | ||| | ||| || Sbjct 177 GATCTTGAGAGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATGAGGAAGCA 236 Query 23719 CGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAA 23778 || | || || || | || ||| | || ||| || || ||| ||| || || || Sbjct 237 AGACGCCAGCTGTGCCTGAGGGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGTGAA 296 Query 23779 GTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTA 23837 ||| || ||||| ||| ||||| || ||||| ||||| || ||||| || ||||| | Sbjct 297 GTACTTGTTGGACATGTAG-TTGTAGGTCTCGATTGCGGCCTCGATGTCGTCGCCGTGGA 355 Query 23838 TACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTT 23897 | |||| || || ||||| ||||||| || ||||||||| | ||||| ||| Sbjct 356 TGCCGACAGCAACACGCATGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCGTCAATGC 415 Query 23898 TGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGAT 23957 || |||||||| || | | ||| || || ||||| || | ||||| |||||||| | Sbjct 416 GGAGAAGATATGAGCGCTCGAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCACGGT 475 Query 23958 CGTGCACTATGGCCGAATTCA 23978 ||| || |||||||| |||| Sbjct 476 CGTAGACAATGGCCGAGTTCA 496 >seq109206 Length=27697 Score = 181 bits (200), Expect = 9e-41 Identities = 591/898 (66%), Gaps = 30/898 (3%) Strand=Plus/Minus Query 57531 CCCCG-TAGATT-TGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAA 57588 ||||| ||| || ||| ||||| |||||| | || || || |||||| | |||||||| | Sbjct 8599 CCCCGATAGGTTCTGT-ATGTTCCCGATTCAGTACCCGGAGATTTGGGAGATGTACAAGA 8541 Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| || || ||||| ||||| | || || || || || || | || | | | | Sbjct 8540 AGGCCGAGGCCTCGTTCTGGACGGCGGAGGAGGTGGATCTCTCCCAAGACAATACCCAAT 8481 Query 57649 GGGATTCCCTCAAAGAATCT-GA-GAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTC 57704 |||| | | || || || ||||| | || ||| || || | || || || Sbjct 8480 GGGAGAACAT----GACTCCCGATGAGAAGCACTTCATTTCCCATGTTCTTGCTTTCTTT 8425 Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCAC-AAGAAG-TGC 57762 ||||| || || || || ||| |||||| | | || ||| || || ||| || | | Sbjct 8424 GCCGCCTCAGACGGCATCGTTTTGGAGAATCTCGCCGGAAGGTT--CATGAAGGAGATTC 8367 Query 57763 AAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAG 57822 |||| |||||||| | |||||| || || || | || || || || | || || | Sbjct 8366 AAGTCGCGGAGGCGCGTGCCTTTTATGGGTTCCAGATCGCTATCGAGAATATTCACTCTG 8307 Query 57823 AAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGT 57882 | ||||| || | | || || ||| | || ||| | ||||| | || | Sbjct 8306 AGATGTACAGTCTCTTGTTGGAGACTTACATTAAAGACCCGGCTGAGAAGAACCGCCTCT 8247 Query 57883 TCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGA 57942 | |||| ||||| || || || | ||||||||||| ||||| | || | |||| Sbjct 8246 TTCACGCCATCGAGACCATTCCTTGTGTGGCCAAGAAGGCTCAGTGGGCCATGAGGTGGA 8187 Query 57943 TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTA 58002 | | || | | | | ||||| ||| || | |||||||||||| |||||| || | Sbjct 8186 TCGA---CGGCTCAGAATCTTTCGCGGAGCGGTTGATCGCGTTCGCCTGCGTCGAGGGGA 8130 Query 58003 TATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061 | ||||| || || ||||| |||| | ||||||||| | ||||||||||| ||||||| Sbjct 8129 TCTTCTTCTCCGGAAGCTTCTGCG-CGATATTTTGGCTAAAGAAACGCGGGTTGATGCCG 8071 Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121 || || ||||| ||||||||||||||||| || || || | || ||||| ||| Sbjct 8070 GGTCTCACGTTCTCTAACGAGTTGATATCGCGAGATGAAGGGTTACACTGCGATTTCGCG 8011 Query 58122 TGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG-GGATCGCATCTTGGACATTAT 58180 || | | ||| | | | || || | || ||| ||| || || || || || Sbjct 8010 TGTTTGCTTTACACGCTTCTGAAGAAGAAGCTGA-GCGAGGAGCGAGTCAGGGGAATCAT 7952 Query 58181 CACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCT 58240 | ||| || || | ||||| | ||||| ||| || || || || || || | Sbjct 7951 CCGCGATGCCGTTGATATCGAGAGGGAGTTCGTCTGTGATGCTCTGCCTTGTGCGTTGGT 7892 Query 58241 CGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCT 58300 ||||||||| |||| | |||| ||||| || ||||| || || || || ||| | Sbjct 7891 GGGTATGAACGGTGATCTTATGTGCAAGTATATCGAGTTCGTGGCTGATCGA---TTGAT 7835 Query 58301 CGAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGAATC 58356 || | |||| || || ||||| | | || || ||||||| ||| | | Sbjct 7834 GGATGCG-TTGGGTTACGCCAAGATCTACAATGCCCAGAACCCCTTTGATTGGATGGAGC 7776 Query 58357 TGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||| ||| | |||| ||||| ||||| || || || | ||| | || || ||||| Sbjct 7775 TGATATCGTTGCAGGGTAAGACCAACTTCTTTGAGAAGAGGGTTGGAGAGTACCAAAA 7718 >seq109654 Length=28343 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || |||||||| |||| || ||| | ||| Sbjct 18876 ATGCAGATCTTCGTTAAGACTTTGACCGGAAAGACGATCACGCTCGAAGTCGAATCATCC 18817 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||||||| | || || |||||| Sbjct 18816 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 18757 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || ||| | ||||| || | ||| || ||| Sbjct 18756 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGAACCCTCGCCGACTACAAC 18697 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || ||||||||||| || || || | || |||| Sbjct 18696 ATTCAGAAGGAGTCCACCCTTCATCTGGTGCTAAGGCTCCGTGGTGGTA 18648 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || |||||||| ||||| | || || || || Sbjct 17964 ATGCAAATCTTCGTGAAGACCCTTACGGGCAAAACCATCACTTTGGAGGTGGAGAGCTCT 17905 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||||||||||||| | || || |||||| Sbjct 17904 GACACAATTGATAATGTAAAGGCTAAAATCCAGGACAAGGAAGGCATCCCACCAGACCAG 17845 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || || || ||||| ||| | ||| | ||||| ||| Sbjct 17844 CAGCGTCTCATCTTTGCAGGGAAGCAATTGGAGGACGGTCGCACTCTTGCTGATTACAAC 17785 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || || || Sbjct 17784 ATTCAGAAGGAGTCTACCCTTCACCTTGTTCT 17753 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || || || || || || || |||||| | || || || ||| Sbjct 18420 ATGCAGATATTTGTGAAAACCCTCACCGGGAAGACCATCACCCTTGAGGTCGAGAGCTCC 18361 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | ||| ||||||||| || | || || |||||| Sbjct 18360 GACACAATCGACAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 18301 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| |||||| | || ||| || | ||| || ||| Sbjct 18300 CAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGACGGCCGTACCCTTGCCGACTACAAC 18241 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || |||||||| ||| |||| ||| | || | || |||| Sbjct 18240 ATCCAGAAGGAGTCGACTCTCCATTTGGTGCTTCGTCTCCGTGGAGGTA 18192 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 || || ||||| || ||||| || || || || || || || ||||| |||| || || Sbjct 19338 TCGAATATGCAGATCTTCGTCAAAACCCTAACCGGTAAGACCATCACTCTCGAGGTCGAG 19279 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 ||||||| |||| | || || | || |||||||| || | || || Sbjct 19278 AGCTCCGACACCATCGACAATGTTAAGGCCAAGATTCAAGACAAGGAGGGGATCCCTCCG 19219 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366 ||||||||| | || || |||||||| || ||| | ||||| | || || |||| Sbjct 19218 GACCAGCAGAGGCTTATCTTCGCTGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCCGAT 19159 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || ||||||||||||||||| || || || | || |||| Sbjct 19158 TACAATATCCAGAAGGAGTCGACTCTTCATCTGGTGCTCAGGCTCCGTGGTGGTA 19104 >seq113932 Length=32622 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || ||||| || ||| | || ||||| | || Sbjct 27413 CATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTC 27472 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 27473 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCA 27532 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 ||||||||| || ||||| || || ||| | || ||| || | ||| ||||| | Sbjct 27533 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCT-AGCGGATTACA 27591 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || || || |||||||| || |||| || | || ||||| || Sbjct 27592 ACATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 27640 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| || || || || || ||||| || ||| | || ||||| Sbjct 19328 CAATCATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGT 19387 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | || |||| | || | ||||| | || ||||||||| ||| | || || | Sbjct 19388 CTTCTGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGG 19447 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GAT 31366 ||||||||||||| || ||||| || || ||| | || ||| || | ||| ||| Sbjct 19448 ACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCT-AGCGGAT 19506 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || || || |||||||| || |||| || | || ||||| || Sbjct 19507 TACAACATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 19559 >seq106905 Length=25706 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || ||||| || ||| | || ||||| | || Sbjct 9323 CATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTC 9382 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 9383 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCA 9442 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 ||||||||| || ||||| || || ||| | || ||| || | ||| ||||| | Sbjct 9443 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCT-AGCGGATTACA 9501 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || || || |||||||| || |||| || | || ||||| || Sbjct 9502 ACATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 9550 >seq97232 Length=18783 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || ||||| || ||| | || ||||| | || Sbjct 12515 CATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTC 12456 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 12455 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCA 12396 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 ||||||||| || ||||| || || ||| | || ||| || | ||| ||||| | Sbjct 12395 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCT-AGCGGATTACA 12337 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || || || |||||||| || |||| || | || ||||| || Sbjct 12336 ACATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 12288 >seq86460 Length=13305 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || ||||| || ||| | || ||||| | || Sbjct 11859 CATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTC 11918 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 11919 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCA 11978 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 ||||||||| || ||||| || || ||| | || ||| || | ||| ||||| | Sbjct 11979 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCT-AGCGGATTACA 12037 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || || || |||||||| || |||| || | || ||||| || Sbjct 12038 ACATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 12086 >seq86116 Length=13258 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || || || || || || ||||| |||||| | || || ||| || Sbjct 3618 CATGCAAATCTTTGTCAAAACCCTTACTGGAAAAACCATCACCTTGGAGGTCGAAAGCTC 3559 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || ||||||||||| | || || ||||| Sbjct 3558 CGACACAATTGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCACCAGACCA 3499 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || ||||||||||| ||| | || ||| ||| | |||||| || Sbjct 3498 GCAGAGATTGATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTGCCGATTACAA 3439 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || |||||||| || ||||| ||||||| Sbjct 3438 CATCCAGAAAGAATCCACCCTTCACTTGGTACT 3406 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || || || ||||| |||||| | || || ||| || Sbjct 3389 ATGCAAATTTTTGTTAAGACACTCACCGGGAAAACCATCACCCTTGAGGTGGAAAGCTCA 3330 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || ||||||||| || | || || |||||| Sbjct 3329 GATACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 3270 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || |||||||| || || | || || ||| | |||||||||| Sbjct 3269 CAGAGGTTGATCTTCGCTGGTAAGCAACTCGAGGATGGCCGGACCCTTGCCGATTATAAC 3210 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| |||||||| || ||||| |||| || Sbjct 3209 ATTCAGAAAGAATCCACCCTTCACTTGGTTCT 3178 >seq64237 Length=5233 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || ||||| || ||| | || ||||| | || Sbjct 3317 CATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTC 3258 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 3257 TGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCA 3198 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 ||||||||| || ||||| || || ||| | || ||| || | ||| ||||| | Sbjct 3197 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCT-AGCGGATTACA 3139 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || || || |||||||| || |||| || | || ||||| || Sbjct 3138 ACATCCAGAAGGAGTCGACTCTCCACTTGGTGCTCCGTCTCAGGGGAGG 3090 >seq115941 Length=36387 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| |||| || || || ||||| | || || || || Sbjct 4665 CATGCAGATCTTTGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTGGAGAGCTC 4606 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | ||||| | ||| ||||| || ||| | || || ||||| Sbjct 4605 GGATACCATTGATAATGTCAAGGCAAAAATTCAAGACAAAGAGGGCATCCCACCGGACCA 4546 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | |||| |||||||| |||||||||||||| | |||| || || ||||| Sbjct 4545 GCAGAGGTTAATTTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTTTGGCTGACTATAA 4486 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || |||||||| || || || Sbjct 4485 CATTCAGAAGGAGTCCACTCTTCACCTTGTCCT 4453 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || || || ||||| |||||| |||| || || || Sbjct 4892 ATGCAAATTTTTGTGAAGACCCTTACGGGAAAAACCATCACCCTCGAGGTCGAGAGCTCT 4833 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || || ||| |||||||| || | || || ||||| Sbjct 4832 GATACAATTGACAATGTAAAGGCGAAAATTCAAGACAAGGAGGGAATTCCCCCGGACCAA 4773 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || || ||||| || | |||| | ||||| ||| Sbjct 4772 CAGAGGTTGATTTTTGCTGGGAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAAC 4713 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| || ||||| || || || | |||||||| || Sbjct 4712 ATCCAGAAGGAATCAACCCTTCACCTTGTGCTGCGTCTGAGGGGTGG 4666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445028233129920