Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq116532 96.9 3e-15 >seq116532 Length=35955 Score = 96.9 bits (106), Expect = 3e-15 Identities = 85/105 (81%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| ||||||||||| || || || ||||||||| |||||| || ||||| ||||| || Sbjct 9718 ACAAGCAAAATCACAGTGGAGTCCTTCATCTCTAGAAATAAGCTCATTTGAGAATGTCAA 9659 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA 13975 |||||||| ||||| | ||||| | ||| ||||||||| |||| Sbjct 9658 GCCTGGCATTAATCCCCTCTTTTTAAGCCAGAATATTGCA-CAAA 9615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478933594418400