Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_007623.1 Length=211215 Score E Sequences producing significant alignments: (Bits) Value seq108658 89.7 7e-13 >seq108658 Length=27099 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 102944 ACTCCGTGATAGCTCAGTAGGTAGAGCAACTGTTTCGTAAACAGTAGGTCCCGGGTTCGA 103003 || ||| |||||||||| ||||||||||||| | |||| ||||||||||||||||||| Sbjct 6653 ACGCCGGTATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGGGTTCGA 6712 Query 103004 ACCCTGGTCACGGAACCAAACA 103025 |||||| ||| |||||||| Sbjct 6713 CTCCTGGTGCCGGCACCAAACA 6734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 674640975228000