Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq58572 84.2 7e-12 >seq58572 Length=4186 Score = 84.2 bits (92), Expect = 7e-12 Identities = 127/179 (71%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 35631 TCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAAC--GGTACCGG 35688 ||||||||||||| || || |||||| ||||||||||| | |||||| ||| ||| Sbjct 4186 TCCTGCCGCGCTCTGGCCTGGGCCATAAACACGGCATCGTGTTGGGCAACCTGGT--CGG 4129 Query 35689 CCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGCGGCCGCGA 35748 ||| |||||| |||| |||||||| || || | |||||| || |||| Sbjct 4128 CCTGATCGATTCGGACTACCAGGGCGAACTGATGGTGTCATGCTGGAACCGTGGCCAGAC 4069 Query 35749 GGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCGGTCGTGC 35807 || |||| ||||| ||||| || ||||| ||| |||| | ||||||| |||| Sbjct 4068 CGCGTTCAACATCGCTGTCGGCGAACGCATTGCCCAGTTGGTACTGGTGCCGGTGGTGC 4010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148901386328760