Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq27482 140 2e-28 seq131474 131 1e-25 seq130631 131 1e-25 seq125899 131 1e-25 seq107718 131 1e-25 seq43070 123 2e-23 seq113932 100 2e-16 seq106905 100 2e-16 seq97232 100 2e-16 seq86460 100 2e-16 seq64237 100 2e-16 seq86116 96.9 2e-15 seq115941 95.1 8e-15 seq129262 93.3 3e-14 seq125715 93.3 3e-14 seq116717 93.3 3e-14 seq28723 84.2 1e-11 >seq27482 Length=1887 Score = 140 bits (154), Expect = 2e-28 Identities = 77/77 (100%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 836 Query 20007 GGTAATATTTAGCCTTA 20023 ||||||||||||||||| Sbjct 837 GGTAATATTTAGCCTTA 853 >seq131474 Length=103143 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 42106 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 42165 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 42166 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 42200 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 74474 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 74533 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 74534 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 74568 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 76595 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 76654 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 76655 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 76689 Score = 105 bits (116), Expect = 4e-18 Identities = 81/96 (84%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 25901 TAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCG 25955 ||||||| |||||||||||||||||||||||||||||||| | || || ||||||| Sbjct 66299 TAAGCCCATTCCCTTGGCTGTGGTTTCGCTAGATAGTAGACAAGGACAGTGGGAATCTCG 66358 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||| | ||||| | | ||||||||||||||||| Sbjct 66359 TTAATACATTCATACATGCCACTAATTAGATGACGA 66394 Score = 102 bits (112), Expect = 5e-17 Identities = 79/94 (84%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| | ||||||||| |||||||||||| ||||||||| | || || |||||||| Sbjct 54136 AAGCTCATTCCCTTGGTTGTGGTTTCGCTGGATAGTAGACAAGGACTGTGGGAATCTCGT 54195 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACG 25990 |||| | || |||||||||||||||||||||||| Sbjct 54196 TAATGCATTAATGCGCGTCACTAATTAGATGACG 54229 Score = 93.3 bits (102), Expect = 3e-14 Identities = 79/96 (82%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCG- 25955 ||||| ||||||||||||||||| ||||| ||||||| | |||| || ||||||| Sbjct 29576 AAGCCTGTTCCCTTGGCTGTGGTCTCGCTGGATAGTATACAGGGAGAGTGGGAATCTCGT 29635 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||| |||||||||||| |||| || Sbjct 29636 TTAATCAATTCATGCTCGTCACTAATTAAATGATGA 29671 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 33461 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 33520 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 33521 GCCCGTATTTAGCCTT 33536 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 35516 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 35575 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 35576 GCCCGTATTTAGCCTT 35591 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 68148 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 68207 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 68208 GCCCGTATTTAGCCTT 68223 >seq130631 Length=123029 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 97843 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 97902 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 97903 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 97937 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 99944 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 100003 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 100004 GCCCGTATTTAGCCTT 100019 Score = 89.7 bits (98), Expect = 3e-13 Identities = 78/96 (81%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||| |||||||||||| || |||| || | |||| || ||||| || Sbjct 47247 AAGCCTGTTCCCTCGGCTGTGGTTTCACTGGATATTATACAGGGAGAGTGGGAATCTTGT 47306 Query 25957 T-AATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||| ||||||||||||||||||||| Sbjct 47307 TTAATCAATTCATGTGCGTCACTAATTAGATGACGA 47342 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| | | | Sbjct 89797 CTCTCTCTTCAAAGTACTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGATATTAC 89856 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||| |||| Sbjct 89857 CATCGTATTTAGTCTTA 89873 Score = 84.2 bits (92), Expect = 1e-11 Identities = 62/73 (85%), Gaps = 5/73 (7%) Strand=Plus/Plus Query 25924 TTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACT 25978 || | || ||||||||| |||| || |||||||||||||| ||||||||||||||| Sbjct 87321 TTCCNCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 87380 Query 25979 AATTAGATGACGA 25991 ||||||||||||| Sbjct 87381 AATTAGATGACGA 87393 >seq125899 Length=55411 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 29320 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 29261 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 29260 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 29226 Score = 100 bits (110), Expect = 2e-16 Identities = 79/95 (83%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||||||||||||||| | | ||||||||| |||| || |||||| | Sbjct 23572 AAGCCAGTTCCCTTGGCTGTGGTTTTGATGGATAGTAGAGAGGGACAATGGGAATCTCAT 23513 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||| |||||||||||||||| || Sbjct 23512 TAATCCATTCATGCATGTCACTAATTAGATGATGA 23478 >seq107718 Length=26442 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 20542 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 20483 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 20482 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 20448 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 18546 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 18487 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 18486 GCCCGTATTTAGCCTT 18471 >seq43070 Length=2765 Score = 123 bits (136), Expect = 2e-23 Identities = 203/293 (69%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 6194 GGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAA 6253 ||| || |||||||| ||||| ||| | ||| ||||| |||| || ||||| || Sbjct 1178 GGATGCCTTCTACCGTTACAAGATGGAGAAGATCCAGTCCAAGATCGAAGGCAAGGGCAA 1119 Query 6254 CGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGC 6313 |||||| || |||||||| |||||| | | | || || | ||| | ||||| | Sbjct 1118 CGGTATCAAGACCGTCATCGTCAACCTCCACAACGTGGCCGACCAGCTGGCCCGCCCGCC 1059 Query 6314 CACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373 | ||| | ||||| ||||| | ||| |||||||| ||||| | | || | || Sbjct 1058 GAACTATGTCATCAAATACTTCGGTTTCGAGCTTGGCGCCCAGACCAACATCGACCCTAA 999 Query 6374 AAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGA 6433 |||| |||| || || ||||| | || | || |||||||||||||| ||||| Sbjct 998 GGACGACCGCTGGATTGTCAACGGTGCCCACGAGGCTTCCAAGCTGCAGGACCACCTTGA 939 Query 6434 CGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 |||||| || |||||| || || || ||| ||| | ||||| ||||||| Sbjct 938 CGGCTTCATCAACAAGTTCGTCCTTTGCAAGGACTGCAAGAACCCCGAGACCG 886 >seq113932 Length=32622 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||| | |||||| || ||||| |||||| || || |||||||| | Sbjct 27640 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 27581 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || |||||||| || || || || || || || | ||| Sbjct 27580 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 27521 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||| ||||| | || || || | ||||| Sbjct 27520 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 27461 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || || ||||||||||| | |||||||||||| ||||||||| Sbjct 27460 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 27413 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||| | |||||| || ||||| |||||| || || |||||||| | Sbjct 19559 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 19500 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || |||||||| || || || || || || || | ||| Sbjct 19499 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 19440 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||| ||||| | | || || | ||||| Sbjct 19439 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAACC 19380 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 |||| || || ||||||||||| | |||||||||||| ||||||||| || Sbjct 19379 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGATT 19329 >seq106905 Length=25706 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||| | |||||| || ||||| |||||| || || |||||||| | Sbjct 9550 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 9491 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || |||||||| || || || || || || || | ||| Sbjct 9490 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 9431 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||| ||||| | || || || | ||||| Sbjct 9430 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 9371 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || || ||||||||||| | |||||||||||| ||||||||| Sbjct 9370 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 9323 >seq97232 Length=18783 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||| | |||||| || ||||| |||||| || || |||||||| | Sbjct 12288 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 12347 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || |||||||| || || || || || || || | ||| Sbjct 12348 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12407 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||| ||||| | || || || | ||||| Sbjct 12408 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 12467 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || || ||||||||||| | |||||||||||| ||||||||| Sbjct 12468 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 12515 >seq86460 Length=13305 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||| | |||||| || ||||| |||||| || || |||||||| | Sbjct 12086 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 12027 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || |||||||| || || || || || || || | ||| Sbjct 12026 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 11967 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||| ||||| | || || || | ||||| Sbjct 11966 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 11907 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || || ||||||||||| | |||||||||||| ||||||||| Sbjct 11906 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 11859 >seq64237 Length=5233 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || || | ||| | |||||| || ||||| |||||| || || |||||||| | Sbjct 3090 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 3149 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || |||||||| || || || || || || || | ||| Sbjct 3150 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 3209 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| || || ||| ||||| | || || || | ||||| Sbjct 3210 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACC 3269 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || || ||||||||||| | |||||||||||| ||||||||| Sbjct 3270 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 3317 >seq86116 Length=13258 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | |||||||||||| ||||| || |||||| || || || || || | | Sbjct 2935 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCC 2994 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || ||| | || || | || || || ||||| || || | ||| || || | ||| Sbjct 2995 AAGGTTCGTCCATCCTCGAGCTGCTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGG 3054 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || |||||||| | | ||||| |||||| ||| Sbjct 3055 ATACCCTCCTTGTCCTGGATCTTAGCTTTCACATTGTCAATTGTATCGGAACTTTCGACT 3114 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || ||||| ||||| || || | ||| ||||| || || |||||| Sbjct 3115 TCCAAAGTAATGGTTTTCCCGGTAAGGGTCTTCACAAAAATTTGCATG 3162 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||||||||||||||| ||| || ||||| |||||||||| Sbjct 3619 CCACCACGGAGACGGAGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCA 3678 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | || || || ||||| || || | ||| || || | ||| Sbjct 3679 AGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGG 3738 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || ||||| || || ||| ||||| | || || || ||||| || Sbjct 3739 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACC 3798 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || |||||||| || || | |||||||| || |||||||| Sbjct 3799 TCAAGGGTGATAGTTTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 3845 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||||| ||||| || |||||| |||||| || || ||||| |||| | Sbjct 2707 CCCCCACGCAGACGCAGTACCAAGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCAG-C 2765 Query 38151 AAAACACGTTC-GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | | | ||| || | || || || ||||| || | || || || || | ||| Sbjct 2766 AAGGGTCCTCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGG 2825 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || || || || || || ||| ||||| | || ||||| |||||||| Sbjct 2826 GATACCCTCCTTATCTTGGATCTTCGCCTTAACATTGTCGATGGTATCCGAGCTTTCAAC 2885 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| | || || ||||| || |||||||| ||||| || || ||||| Sbjct 2886 TTCAAGGGTGATGGTTTTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 2933 >seq115941 Length=36387 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | ||| | ||| | ||| |||||| ||||||||| || ||||||| Sbjct 4890 CATT-CCACCACGGAGACGAAGCACTAGATGGAGAGTGGACTCCTTTTGTATGTTGTAAT 4948 Query 38146 CAGACAAAACACGTTC-GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | | ||| | ||| ||| || | ||| ||||||||||| || || | || || || Sbjct 4949 CGG-CAAGTGTCCTTCCGTCCTCGAGTTGCTTTCCGGCAAAGATAAGTCTCTGCTGGTCT 5007 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| || || || || || ||| ||| ||||| | | |||||| || Sbjct 5008 GGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTGACATTGTCAATAGTATCGGAGCTC 5067 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || ||||| || ||||| || || | ||| || || || |||||||| Sbjct 5068 TCAACCTCCAATGTTATTGTTTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 5120 >seq129262 Length=110387 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 47895 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 47954 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 47955 GCCCGTATTTAGCCTT 47970 >seq125715 Length=54709 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 19459 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 19518 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 19519 GCCCGTATTTAGCCTT 19534 >seq116717 Length=36260 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 2599 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 2658 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 2659 GCCCGTATTTAGCCTT 2674 >seq28723 Length=2081 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 19960 GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGC 20019 |||||||||| ||||||||||||||||| |||| ||||||||||| | | | |||||||| Sbjct 598 GTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGC 539 Query 20020 CTTA 20023 |||| Sbjct 538 CTTA 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334406410579556