Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq109654 143 6e-29 seq86116 143 6e-29 seq115941 141 2e-28 seq113932 134 3e-26 seq106905 134 3e-26 seq97232 134 3e-26 seq86460 134 3e-26 seq64237 134 3e-26 seq98793 100 7e-16 seq97568 98.7 2e-15 seq17851 91.5 3e-13 >seq109654 Length=28343 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || ||||||||||| || | |||||||||||| | || | ||||| Sbjct 17981 AGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCC 18040 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||||||||||||||| ||||| |||||||| || |||||| || ||| Sbjct 18041 TCCAACTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCTGGGGGAATTCCCTCCTTGTCC 18100 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||||| |||| || || | ||||| ||| Sbjct 18101 TGAATCTTAGCCTTAACGTTGTCGATTGTGTCTGAGCTTTCCACCTCGAGGGTGATGGTC 18160 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || Sbjct 18161 TTCCCTGTGAGGGTCTTGACAAAGATCTG 18189 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||||||||||||||| |||| ||||||||| || | || | || || || ||||| Sbjct 18218 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCGAGCTGT 18277 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| ||||||||||||||||||||||| || |||||| || ||||| || || Sbjct 18278 TTTCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATTTTG 18337 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| |||| ||||| | | || || || | ||||| ||||| || ||| Sbjct 18338 GCCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTCTTCCCGGTG 18397 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || ||||||||||| || || Sbjct 18398 AGGGTTTTCACAAATATCTG 18417 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || || || || |||||||||||||| |||| ||||| || |||| || Sbjct 19112 CGGAGCCTGAGCACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTT 19171 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| ||||||||||| |||||||| || | ||||||||||||| || || Sbjct 19172 CTGCCATCTTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCC 19231 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| || |||| |||||| | | || || || | Sbjct 19232 TCCTTGTCTTGAATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGACCTCGAGA 19291 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || || ||||| || || || || Sbjct 19292 GTGATGGTCTTACCGGTTAGGGTTTTGACGAAGATCTG 19329 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || || || || || || |||||||| || | ||||||||| || | || Sbjct 18656 CGGAGCCTTAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTT 18715 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||||||||| ||||| | | ||||||||| || ||||||| Sbjct 18716 CGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCT 18775 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| |||| |||||| | || ||| || || | | Sbjct 18776 TCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGATGATTCGACTTCGAGC 18835 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || | ||| || || || || || Sbjct 18836 GTGATCGTCTTTCCGGTCAAAGTCTTAACGAAGATCTG 18873 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || |||||||| || | |||||| ||||| | ||| | || || Sbjct 17753 AGAACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGACCGTCC 17812 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| || || |||||||||||||||||||| || || ||||| ||| Sbjct 17813 TCCAATTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCC 17872 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || || | ||||| | | || || ||||| ||||| || Sbjct 17873 TGGATTTTAGCCTTTACATTATCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTT 17932 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| || ||||| Sbjct 17933 TTGCCCGTAAGGGTCTTCACGAAGATTTG 17961 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || |||||||| |||| |||||| ||||| | || | ||| || Sbjct 18437 AGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTACGTCCGTCC 18496 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| || | ||||||||| || || ||||| ||| Sbjct 18497 TCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTCC 18556 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 18557 TGGATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTC 18616 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || || || || Sbjct 18617 TTTCCAGTCAAGGTCTTGACGAAGATCTG 18645 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || || | ||| || || |||||||| |||| |||||| || || | || Sbjct 18884 CGGAGCCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTT 18943 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||| ||||| | | |||||| |||||| ||| ||| Sbjct 18944 CGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATGCCT 19003 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | ||| || | | || || || | Sbjct 19004 TCCTTGTCCTGTATCTTAGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCAAGA 19063 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || || || || || Sbjct 19064 GTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTG 19101 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 ||||||||||| ||||||||| | |||||||| || || ||||||||||||| ||||| Sbjct 19206 CTTATCTTCGCTGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCCGATTACAATATCCAG 19147 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 || ||||| |||||||| || || Sbjct 19146 AAGGAGTCGACTCTTCATCTGGT 19124 >seq86116 Length=13258 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || |||||||| |||| |||||||| |||| ||||| ||||| Sbjct 2494 AGGACAAGGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCCGCCAGGGTCCTCCCATCC 2553 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| || || | ||||||||| ||| ||| || || ||| Sbjct 2554 TCCAGCTGCTTACCAGCGAAAATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 2613 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | ||||||| | || || ||||| || || ||| Sbjct 2614 TGAATCTTGGCCTTCACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTC 2673 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || ||||||||||| Sbjct 2674 TTCCCAGTCAAGGTCTTGACAAAAATTTG 2702 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| ||||| |||||||| |||| |||||||||||| | ||| Sbjct 2713 CGCAGACGCAGTACCAAGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTC 2772 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || || || || |||||||| || || ||||| | ||||||||||| || || || Sbjct 2773 CTCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGGGATACCC 2832 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| || |||| ||| || | |||| || || | Sbjct 2833 TCCTTATCTTGGATCTTCGCCTTAACATTGTCGATGGTATCCGAGCTTTCAACTTCAAGG 2892 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || | || |||||||| ||||| Sbjct 2893 GTGATGGTTTTCCCAGTCAAGGTCTTCACAAAGATTTG 2930 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || ||||||||||| |||| ||| ||||| ||||| || | |||||| || ||||| Sbjct 2958 GTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCCAAGGTTCGTCCATCCTCGAGCTG 3017 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || ||||| | |||||||| || || || || ||||| ||||| Sbjct 3018 CTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTT 3077 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||||| || | || || | |||| || ||||| || || || || || || Sbjct 3078 AGCTTTCACATTGTCAATTGTATCGGAACTTTCGACTTCCAAAGTAATGGTTTTCCCGGT 3137 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || |||||||||||||| Sbjct 3138 AAGGGTCTTCACAAAAATTTG 3158 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| ||||| || || | |||||| ||||| | || | |||||||| |||||| Sbjct 3643 TGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCTTCAAGCTGC 3702 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| || | |||||||| ||| || || || || || ||||| Sbjct 3703 TTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGGATCTTG 3762 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || |||| |||||| | |||| || || | ||||| || || || || Sbjct 3763 GCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCGGTA 3822 Query 199607 AGAGTTTTCACAAAAATTTG 199626 |||||||||||||| || || Sbjct 3823 AGAGTTTTCACAAAGATCTG 3842 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || || || || || | ||| || || || | |||| ||||| Sbjct 3178 AGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAATCGGCAAGGGTCCGGCCATCC 3237 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || |||||||| | | ||||||||| || ||| || || ||| Sbjct 3238 TCGAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 3297 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | ||| |||| |||| || || | ||||| || Sbjct 3298 TGAATCTTGGCCTTGACATTGTCAATGGTATCTGAGCTTTCCACCTCAAGGGTGATGGTT 3357 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||||||||| Sbjct 3358 TTCCCGGTGAGTGTCTTAACAAAAATTTG 3386 >seq115941 Length=36387 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || |||||||||||||||| ||||||||| || | ||| Sbjct 5356 CGAAGACGGAGAACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCTGCGAGTGTC 5415 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || |||||||| |||||||| | | ||||||||| || ||| || Sbjct 5416 CGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCC 5475 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| |||||| |||| |||||| | | || || ||||| Sbjct 5476 TCCTTATCTTGAATCTTAGCTTTCACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAAA 5535 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||||||||| || || ||||| Sbjct 5536 GTGATGGTCTTTCCGGTGAGAGTTTTGACGAAGATTTG 5573 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| ||||| |||||||| || | ||| ||||||||||||||| Sbjct 4444 CGAAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGCCAAAGTC 4503 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||||||||||| ||| || || ||||| || | | |||||||||||| || || Sbjct 4504 CTTCCATCTTCCAACTGTTTCCCAGCGAAAATTAACCTCTGCTGGTCCGGTGGGATGCCC 4563 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || ||||| ||| ||| || || | ||| || | | || || ||||| Sbjct 4564 TCTTTGTCTTGAATTTTTGCCTTGACATTATCAATGGTATCCGAGCTCTCCACCTCCAAA 4623 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || ||||| || || Sbjct 4624 GTGATGGTCTTTCCAGTCAAGGTCTTAACAAAGATCTG 4661 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | |||||| || |||||||| || | |||||| ||||| | ||| Sbjct 5128 CGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCGAGAGTT 5187 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| || ||||||||||| |||||||| || ||||||||||| || || || Sbjct 5188 CTCCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGCCGCTGCTGGTCTGGGGGGATGCCC 5247 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||||| || | |||||| | | || || ||||| Sbjct 5248 TCCTTGTCTTGAATCTTGGCTTTCACATTGTCAATGGTGTCCGAGCTCTCCACCTCCAAA 5307 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| ||||| ||||| ||||| Sbjct 5308 GTTATGGTTTTTCCAGTGAGGGTTTTGACAAAGATTTG 5345 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || |||||||| ||||||||||| | |||||| || || | |||||||| || Sbjct 4909 AGCACTAGATGGAGAGTGGACTCCTTTTGTATGTTGTAATCGGCAAGTGTCCTTCCGTCC 4968 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||||||||| ||||| || | ||||||||| || || || || || Sbjct 4969 TCGAGTTGCTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTATCT 5028 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| || || | || || | | || || ||||| || || || Sbjct 5029 TGGATCTTTGCCTTGACATTGTCAATAGTATCGGAGCTCTCAACCTCCAATGTTATTGTT 5088 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| || Sbjct 5089 TTCCCGGTAAGGGTCTTAACAAAAATCTG 5117 Score = 100 bits (110), Expect = 7e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| |||||||| || || || ||||| |||| |||||| || || | |||||| ||||| Sbjct 4680 CAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTGCCATC 4739 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||| ||||| || || || || | | ||| |||||||| |||||| || || Sbjct 4740 CTCCAATTGCTTCCCAGCAAAAATCAACCTCTGTTGGTCCGGGGGAATTCCCTCCTTGTC 4799 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| || ||| || || | || || | | || || || | ||||| || Sbjct 4800 TTGAATTTTCGCCTTTACATTGTCAATTGTATCAGAGCTCTCGACCTCGAGGGTGATGGT 4859 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || |||||||||||||| Sbjct 4860 TTTTCCCGTAAGGGTCTTCACAAAAATTTG 4889 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||| ||||| |||||||||| || ||||| |||| || Sbjct 5584 CGAAGACGGAGTACCAAATGGAGGGTCGATTCCTTTTGGATATTATAGTCGGCCAGGGTG 5643 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||||||||| ||||| || || | |||||| || || ||| || Sbjct 5644 CGACCGTCTTCGAGCTGCTTTCCAGCGAAAATCAGCCTCTGCTGATCTGGGGGAATCCCC 5703 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| || || | ||| || | | || || || | Sbjct 5704 TCCTTGTCTTGGATCTTAGCCTTGACATTGTCTATGGTATCCGAACTCTCGACCTCTAGA 5763 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || || |||||||| || ||||| Sbjct 5764 GTGATGGTCTTACCGGTTAGGGTTTTCACGAAGATTTG 5801 Score = 95.1 bits (104), Expect = 3e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || ||||| || || |||||||||||||||||||||||||| || || ||| | ||||| Sbjct 4535 ATTTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTTTGGCTGACTATAACATTCAGAAG 4476 Query 200998 GAGTCTACTCTTCACCTTGT 201017 ||||| |||||||||||||| Sbjct 4475 GAGTCCACTCTTCACCTTGT 4456 >seq113932 Length=32622 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||||||||||||||| |||| |||||| || || | || | || || Sbjct 27625 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 27566 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 27565 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 27506 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | || || || Sbjct 27505 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 27446 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 27445 TTACCCGTTAGGGTTTTCACGAAGATCTG 27417 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||||||||||||||| |||| |||||| || || | || | || || Sbjct 19544 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 19485 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 19484 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 19425 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||| | | || || || | || || || Sbjct 19424 TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAACCTCTAGGGTTATGGTT 19365 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 19364 TTACCCGTTAGGGTTTTCACGAAGATCTG 19336 >seq106905 Length=25706 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||||||||||||||| |||| |||||| || || | || | || || Sbjct 9535 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 9476 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 9475 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 9416 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | || || || Sbjct 9415 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 9356 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 9355 TTACCCGTTAGGGTTTTCACGAAGATCTG 9327 >seq97232 Length=18783 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||||||||||||||| |||| |||||| || || | || | || || Sbjct 12303 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 12362 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 12363 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 12422 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | || || || Sbjct 12423 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 12482 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 12483 TTACCCGTTAGGGTTTTCACGAAGATCTG 12511 >seq86460 Length=13305 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||||||||||||||| |||| |||||| || || | || | || || Sbjct 12071 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 12012 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 12011 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 11952 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | || || || Sbjct 11951 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTT 11892 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 11891 TTACCCGTTAGGGTTTTCACGAAGATCTG 11863 >seq64237 Length=5233 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||||||||||||||| |||| |||||| || || | || | || || Sbjct 3105 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCC 3164 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 3165 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 3224 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | || || || Sbjct 3225 TGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCTAGGGTTATGGTT 3284 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 3285 TTACCCGTTAGGGTTTTCACGAAGATCTG 3313 >seq98793 Length=19735 Score = 100 bits (110), Expect = 7e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| ||||| || ||||| ||||||||||||| ||| || ||||| | ||| | | Sbjct 5371 AGCCTCAAAACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCAGCAAGAGTTCGT 5430 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| |||| |||||||||||| ||||| | | |||||| || ||| || ||||| Sbjct 5431 CCATCCTCCAACTGCTTTCCGGCAAAGATCAATCTCTGCTGATCAGGAGGGATGCCTTCC 5490 Query 199532 CGCTCCTGAA 199541 ||||||| Sbjct 5491 TTATCCTGAA 5500 Score = 98.7 bits (108), Expect = 2e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| ||||||||||||||||| |||||| | ||| | || ||||| ||| |||| || Sbjct 5459 ATCTTTGCCGGAAAGCAGTTGGAGGATGGACGAACTCTTGCTGATTATAACATCCAAAAG 5400 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 ||||| |||||||| ||||||||||| || Sbjct 5399 GAGTCAACTCTTCATCTTGTTTTGAGGCT 5371 >seq97568 Length=18938 Score = 98.7 bits (108), Expect = 2e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| ||||||||||||||||| |||||| | ||| | || ||||| ||| |||| || Sbjct 7037 ATCTTTGCCGGAAAGCAGTTGGAGGATGGACGAACTCTTGCGGATTATAACATCCAAAAG 7096 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 ||||| |||||||| ||||||||||| || Sbjct 7097 GAGTCAACTCTTCATCTTGTTTTGAGGCT 7125 Score = 95.1 bits (104), Expect = 3e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| ||||| || ||||| ||||||||||||| ||| || || || | ||| | | Sbjct 7125 AGCCTCAAAACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCCGCAAGAGTTCGT 7066 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| |||| |||||||||||| ||||| | | |||||| || ||| || ||||| Sbjct 7065 CCATCCTCCAACTGCTTTCCGGCAAAGATCAATCTCTGCTGATCAGGAGGGATGCCTTCC 7006 Query 199532 CGCTCCTGAA 199541 ||||||| Sbjct 7005 TTATCCTGAA 6996 >seq17851 Length=1283 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| || || |||||||| |||| ||||||||| | | ||| Sbjct 1073 CGAAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTA 1132 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||||| || |||||||| ||||||||||| | ||||| |||||||| Sbjct 1133 CGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCCGG 1182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176920558895892