Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq113932 125 8e-24 seq106905 125 8e-24 seq97232 125 8e-24 seq86460 125 8e-24 seq64237 123 3e-23 seq86116 114 1e-20 seq109654 104 3e-17 seq17851 100 3e-16 seq115941 98.7 1e-15 >seq113932 Length=32622 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||||| || | || |||||| ||||| ||||| || | | Sbjct 27640 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 27581 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| ||||||||||| |||||||| || | ||||||||||| | || Sbjct 27580 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 27521 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||||| |||||| ||||| | | | |||||| || || || Sbjct 27520 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 27461 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || |||||||| ||||| || ||||| || ||||| ||||| Sbjct 27460 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 27414 Score = 123 bits (136), Expect = 3e-23 Identities = 171/238 (72%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||||| || | || |||||| ||||| ||||| || | | Sbjct 19559 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 19500 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| ||||||||||| |||||||| || | ||||||||||| | || Sbjct 19499 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 19440 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||||| |||||| ||||| | | | ||||| || || || Sbjct 19439 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAACC 19380 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGCACAAA 46603 || | || |||||||| ||||| || ||||| || ||||| ||||| ||||| ||| Sbjct 19379 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGATTGCAGAAA 19322 >seq106905 Length=25706 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||||| || | || |||||| ||||| ||||| || | | Sbjct 9550 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 9491 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| ||||||||||| |||||||| || | ||||||||||| | || Sbjct 9490 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 9431 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||||| |||||| ||||| | | | |||||| || || || Sbjct 9430 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 9371 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || |||||||| ||||| || ||||| || ||||| ||||| Sbjct 9370 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 9324 >seq97232 Length=18783 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||||| || | || |||||| ||||| ||||| || | | Sbjct 12288 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 12347 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| ||||||||||| |||||||| || | ||||||||||| | || Sbjct 12348 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12407 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||||| |||||| ||||| | | | |||||| || || || Sbjct 12408 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 12467 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || |||||||| ||||| || ||||| || ||||| ||||| Sbjct 12468 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 12514 >seq86460 Length=13305 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||||| || | || |||||| ||||| ||||| || | | Sbjct 12086 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 12027 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| ||||||||||| |||||||| || | ||||||||||| | || Sbjct 12026 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 11967 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||||| |||||| ||||| | | | |||||| || || || Sbjct 11966 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 11907 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || |||||||| ||||| || ||||| || ||||| ||||| Sbjct 11906 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 11860 >seq64237 Length=5233 Score = 123 bits (136), Expect = 3e-23 Identities = 172/240 (72%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||||| || | || |||||| ||||| ||||| || | | Sbjct 3090 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 3149 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| ||||||||||| |||||||| || | ||||||||||| | || Sbjct 3150 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 3209 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||||| |||||| ||||| | | | ||||| || || || Sbjct 3210 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACC 3269 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGCACAAACA 46605 || | || |||||||| ||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 3270 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGATAGCAGAAACA 3329 >seq86116 Length=13258 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| ||||| |||| ||||| || |||| || ||||||||||| ||||| Sbjct 3427 TCTTTCTGGATGTTGTAATCGGCAAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 3486 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||||||||| | || | | |||||||| ||||| ||||| ||| Sbjct 3487 ATCAATCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGA-CGTT 3545 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| ||| || |||| ||||||||||| || || || ||||| || Sbjct 3546 GTCAATTGTGTCGGAGCTTTCGACCTCCAAGGTGATGGTTTTTCCAGTAAGGGTTTTGAC 3605 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 3606 AAAGATTTGCAT 3617 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | |||| || ||||||||||| || || Sbjct 2742 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTCCCGTCCTCAAGCTGCTTGCCAGCAAA 2801 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | | |||||| || ||||||| ||| | | Sbjct 2802 GATCAACCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGGATCTTCGCCTTAACATT 2861 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | || || ||| ||| || || | ||||||||||| || |||| || || Sbjct 2862 GTCGATGGTATCCGAGCT---TTCAACTTCAAGGGTGATGGTTTTCCCAGTCAAGGTCTT 2918 Query 46579 AACAAAGATTTGCAT 46593 |||||||||||||| Sbjct 2919 CACAAAGATTTGCAT 2933 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||| | ||||| ||| | || ||| || || || ||||| || | Sbjct 3617 TGCCACCACGGAGACGGAGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAG 3676 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || ||||| | || || ||||||||||| || || |||| | |||||||| | | Sbjct 3677 CAAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAG 3736 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||||| | | | |||||| ||||| Sbjct 3737 GGATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCA 3796 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||| ||||| || || || ||||| |||||||| ||||| Sbjct 3797 CCTCAAGGGTGATAGTTTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 3845 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | || || |||| ||| |||||| |||||||||||||| | Sbjct 2479 CCACCTCGGAGACGAAGGACAAGGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCCGCC 2538 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || || |||||||| || ||||| || | | ||||||||| | || Sbjct 2539 AGGGTCCTCCCATCCTCCAGCTGCTTACCAGCGAAAATAAGCCTCTGCTGGTCTGGAGGA 2598 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | || |||||||||| ||||| ||| | | | | ||||| |||| || Sbjct 2599 ATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCAATTGTGTCTGAGCTC---TCA 2655 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || || || |||| || || ||||| |||||||| Sbjct 2656 ACCTCCAAGGTAATAGTCTTCCCAGTCAAGGTCTTGACAAAAATTTGCAT 2705 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || || || || || |||| || || || | || ||||| ||||| || ||||| Sbjct 3199 TCTTTCTGAATGTTATAATCGGCAAGGGTCCGGCCATCCTCGAGTTGCTTACCAGCGAAG 3258 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||||||||| | || | | |||||||||| ||||| ||||| | Sbjct 3259 ATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 3318 Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | || || ||| |||||| || | ||||||||||| || || || || ||| Sbjct 3319 TCAATGGTATCTGAGCT---TTCCACCTCAAGGGTGATGGTTTTCCCGGTGAGTGTCTTA 3375 Query 46580 ACAAAGATTTGCAT 46593 ||||| |||||||| Sbjct 3376 ACAAAAATTTGCAT 3389 >seq109654 Length=28343 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | ||||| ||| | || |||||| ||||| |||||||||| Sbjct 18194 CCTCCACGGAGACGAAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 18253 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| |||||||| || || ||||| || | ||||||||||| | || Sbjct 18254 AGGGTACGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 18313 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | |||||||||| ||| || ||||| ||| | | | ||||| |||| || Sbjct 18314 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCGATTGTGTCGGAGCTC---TC 18369 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| || || || || ||||| ||||| || ||||| Sbjct 18370 GACCTCAAGGGTGATGGTCTTCCCGGTGAGGGTTTTCACAAATATCTGCAT 18420 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || | |||||||| |||| || | ||||| || || || Sbjct 17773 CTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGACCGTCCTCCAATTGCTTCCCTGCAAA 17832 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || ||||||||| ||| || ||| | | Sbjct 17833 GATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGGATTTTAGCCTTTACATT 17892 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| ||||| |||| ||||||||||||||||| || || || Sbjct 17893 ATCAATTGTGTCAGAGCTC---TCCACCTCCAAAGTGATGGTTTTGCCCGTAAGGGTCTT 17949 Query 46579 AACAAAGATTTGCAT 46593 || ||||||||||| Sbjct 17950 CACGAAGATTTGCAT 17964 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| |||| || || || | || ||||||||||| ||||| || Sbjct 18913 CTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCAAA 18972 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | |||||| || | || | || ||||||||| ||||| ||||| ||| Sbjct 18973 GATCAACCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGTATCTTAGCCTTGA-CGT 19031 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || || | |||||||| || || |||| || || | Sbjct 19032 TGTCAATGGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTGA 19091 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 19092 CGAAGATCTGCAT 19104 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || |||||| ||||||||||| |||| || || | | || || Sbjct 19123 CACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTTCTGCCATCTTC 19182 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| || ||||| || | | ||||||||| | || | | ||||||||| Sbjct 19183 GAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCCTCCTTGTCTTG 19242 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| ||| | | | | ||||| |||| || || || | |||||||| Sbjct 19243 AATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAGTGATGGT 19299 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || || || ||||| || ||||| ||||| || Sbjct 19300 CTTACCGGTTAGGGTTTTGACGAAGATCTGCATATT 19335 >seq17851 Length=1283 Score = 100 bits (110), Expect = 3e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| ||||| || | || || ||||||||||||||||| Sbjct 1102 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCGGCGAA 1161 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| | || | | ||||||||| ||| Sbjct 1162 GATCAAGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCTATG 1204 >seq115941 Length=36387 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||||||||| ||||||| || ||||| |||| ||||||||||| || ||||| Sbjct 5614 TCCTTTTGGATATTATAGTCGGCCAGGGTGCGACCGTCTTCGAGCTGCTTTCCAGCGAAA 5673 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | |||||| || | || | | ||||||||| |||||| ||||| | Sbjct 5674 ATCAGCCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTGGATCTTAGCCTTGACATTG 5733 Query 46523 GCCACCGTGTCGCTCGA---TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | || || ||| || || || | |||||||| || || || || ||||| Sbjct 5734 TCTATGGTATC---CGAACTCTCGACCTCTAGAGTGATGGTCTTACCGGTTAGGGTTTTC 5790 Query 46580 ACAAAGATTTGCAT 46593 || ||||||||||| Sbjct 5791 ACGAAGATTTGCAT 5804 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || | ||||| | | | || || |||||||| || ||||| Sbjct 5157 CTCCTTCTGAATGTTGTAATCAGCGAGAGTTCTCCCATCCTCAAGCTGCTTTCCAGCGAA 5216 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || ||||||||| ||||| || | | Sbjct 5217 GATAAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGGCTTTCACATT 5276 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| ||||| |||| || |||||||| || || || ||||| Sbjct 5277 GTCAATGGTGTCCGAGCTC---TCCACCTCCAAAGTTATGGTTTTTCCAGTGAGGGTTTT 5333 Query 46579 AACAAAGATTTGCAT 46593 |||||||||||||| Sbjct 5334 GACAAAGATTTGCAT 5348 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | || || || | || || || ||||| || ||||| Sbjct 5385 CTCCTTTTGGATGTTGTAGTCTGCGAGTGTCCGGCCATCCTCAAGTTGCTTTCCAGCGAA 5444 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | || | || |||||| || ||||| ||| ||| Sbjct 5445 GATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCTTGAATCTT-AGCTTTCACGT 5503 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| || || |||| |||||||| || || || || |||| Sbjct 5504 TGTCGATGGTGTCCGAGCTC---TCGACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTTT 5560 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||||||||| Sbjct 5561 TGACGAAGATTTGCAT 5576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564302393471520