Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq109654 123 2e-23 seq86116 113 3e-20 seq64237 111 1e-19 seq113932 109 4e-19 seq106905 105 4e-18 seq97232 105 4e-18 seq86460 105 4e-18 seq115941 98.7 6e-16 seq97568 86.0 4e-12 seq98793 82.4 5e-11 >seq109654 Length=28343 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||| | | |||||||| | || || ||||||||||| ||||| | | Sbjct 17966 CCACCCCTCAAACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCA 18025 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||| ||| |||||||| || || || |||||||||||| | || Sbjct 18026 AGGGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCTGGGGGA 18085 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| || ||| | || | || | || || Sbjct 18086 ATTCCCTCCTTGTCCTGAATCTTAGCCTTAACGTTGTCGATTGTGTCTGAGCTTTCCACC 18145 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||| ||||| || || ||||| ||||| ||||||||||||||| Sbjct 18146 TCGAGGGTGATGGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCATA 18193 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | || | || || ||||||||||| || || Sbjct 18230 TCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCGAGCTGTTTTCCAGCGAAG 18289 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| || || |||||| Sbjct 18290 ATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTG 18349 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | ||| ||||| || || ||||| || |||||| Sbjct 18350 TCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTCTTCCCGGTGAGGGTTTTCACA 18409 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 18410 AATATCTGCATA 18421 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | |||| || ||||| ||||| || || | ||| | ||| | || || Sbjct 18440 ACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTACGTCCGTCCTCA 18499 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| |||||||| || || || | ||||||||| | || | ||| |||||||| Sbjct 18500 AGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTCCTGG 18559 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || || ||| || || | || ||||| ||| Sbjct 18560 ATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTT 18619 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| || |||||||||||| Sbjct 18620 CCAGTCAAGGTCTTGACGAAGATCTGCATA 18649 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| |||| ||| || ||||||||||| ||||| | ||| |||| |||| || Sbjct 18668 ACCAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCTTCA 18727 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || | | ||||||||| | || | || |||||||| Sbjct 18728 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGG 18787 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | || | || | || || |||| || || || ||| Sbjct 18788 ATCTTGGCTTTGACGTTGTCGATGGTGTCGGATGATTCGACTTCGAGCGTGATCGTCTTT 18847 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||| || |||||||||||| Sbjct 18848 CCGGTCAAAGTCTTAACGAAGATCTGCATA 18877 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||| || || | ||| |||| |||| || Sbjct 18896 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTCG 18955 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || | | ||||| || | || | || |||||||| Sbjct 18956 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGT 19015 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || || ||| || || | || ||||| ||| Sbjct 19016 ATCTTAGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTT 19075 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| || |||||||||||| Sbjct 19076 CCGGTCAAGGTCTTGACGAAGATCTGCATA 19105 >seq86116 Length=13258 Score = 113 bits (124), Expect = 3e-20 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| |||||||||||||| || || | |||| | || |||| || Sbjct 3637 ACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCTTCA 3696 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | |||||||||| | || | ||||||||||| Sbjct 3697 AGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGG 3756 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || ||||||| || | || || || | ||| || || Sbjct 3757 ATCTTGGCCTTGAC--AT--TATCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGT 3812 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||| || ||||| ||||||||||||||||| Sbjct 3813 TTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 3845 Score = 102 bits (112), Expect = 5e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| |||||||||||||||||| || | |||| | || |||| || Sbjct 3180 AACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAATCGGCAAGGGTCCGGCCATCCTC 3239 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || || || || | | ||||||||| | || | ||||||||||| Sbjct 3240 GAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTG 3299 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| ||||| | || | || | || || || | ||| |||||||| Sbjct 3300 AATCTTGGCCTTGACATTGTCAATGGTATCTGAGCTTTCCACCTCAAGGGTGATGGTTTT 3359 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| ||||| || |||||| Sbjct 3360 CCCGGTGAGTGTCTTAACAAAAATTTGCATA 3390 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || || ||||| ||||||||||| | | | ||||| |||| Sbjct 2949 CAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCCAAGGTTCGTCCATC 3008 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || || ||||| || || | ||||||||| |||| | ||||||||||| Sbjct 3009 CTCGAGCTGCTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGGATACCCTCCTTGTC 3068 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATT-CACCGG---CCTCAACATCGACGGTTA 34944 ||||| ||| || || | || ||| | ||| || || || | || | Sbjct 3069 CTGGATCTTAGCTTTCAC--AT--TGTCAATTGTATCGGAACTTTCGACTTCCAAAGTAA 3124 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||| || || || ||||||||||| || ||||| Sbjct 3125 TGGTTTTCCCGGTAAGGGTCTTCACAAAAATTTGCAT 3161 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| ||||||||| ||||| || || | ||| | || | || || Sbjct 3409 ACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGCAAGAGTACGGCCGTCCTCA 3468 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | || ||||||||| | || | || |||||||| | Sbjct 3469 AGCTGCTTGCCAGCGAAAATCAATCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGA 3528 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | || || || | ||| ||||||||| Sbjct 3529 ATCTTGGCCTTGACGTTGTCAATTGTGTCGGAGCTTTCGACCTCCAAGGTGATGGTTTTT 3588 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || || |||||||| ||||| Sbjct 3589 CCAGTAAGGGTTTTGACAAAGATTTGCAT 3617 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| | |||| | | | || || Sbjct 2725 ACCAAGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTCCCGTCCTCA 2784 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || | || ||||||||| | || | |||||||| || Sbjct 2785 AGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGG 2844 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCGGCCT--CAACATCGACGGTTATGGT 34948 |||||| || || || | ||||| | ||| || |||| || | ||| ||||| Sbjct 2845 ATCTTCGCCTTAAC--AT--TGTCGATGGTATCCGAGCTTTCAACTTCAAGGGTGATGGT 2900 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || | |||||||||||||| ||||| Sbjct 2901 TTTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 2933 >seq64237 Length=5233 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||||||||| | | | |||||||| | || || ||||| ||||| || |||| Sbjct 3089 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 3148 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| |||| | || || ||||| |||||||| || || || || |||||||| | || Sbjct 3149 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 3208 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCT 34929 | ||||||||||| ||||| ||||| || | ||||| ||| | || Sbjct 3209 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCAGAAGACT 3264 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || | |||||||||||| ||||| || || ||||| ||||||||||| Sbjct 3265 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 3316 >seq113932 Length=32622 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||||||||| | | | |||||||| | || || ||||| ||||| || |||| Sbjct 19560 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 19501 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| |||| | || || ||||| |||||||| || || || || |||||||| | || Sbjct 19500 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 19441 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | ||||||||||| ||||| ||||| | || | ||| | |||||| Sbjct 19440 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAAC 19381 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | |||||||||||| ||||| || || ||||| ||||||||||| Sbjct 19380 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 19333 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||||||||| | | | |||||||| | || || ||||| ||||| || |||| Sbjct 27641 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 27582 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| |||| | || || ||||| |||||||| || || || || |||||||| | || Sbjct 27581 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 27522 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCT 34929 | ||||||||||| ||||| ||||| || | ||||| || | || Sbjct 27521 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 27466 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || | |||||||||||| ||||| || || ||||| ||||||||||| Sbjct 27465 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 27414 >seq106905 Length=25706 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||||||||| | | | |||||||| | || || ||||| ||||| || |||| Sbjct 9551 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 9492 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| |||| | || || ||||| |||||||| || || || || |||||||| | || Sbjct 9491 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 9432 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCT 34929 | ||||||||||| ||||| ||||| || | ||||| || | || Sbjct 9431 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 9376 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || | |||||||||||| ||||| || || ||||| ||||||||||| Sbjct 9375 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 9324 >seq97232 Length=18783 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||||||||| | | | |||||||| | || || ||||| ||||| || |||| Sbjct 12287 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 12346 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| |||| | || || ||||| |||||||| || || || || |||||||| | || Sbjct 12347 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 12406 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCT 34929 | ||||||||||| ||||| ||||| || | ||||| || | || Sbjct 12407 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 12462 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || | |||||||||||| ||||| || || ||||| ||||||||||| Sbjct 12463 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 12514 >seq86460 Length=13305 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||||||||| | | | |||||||| | || || ||||| ||||| || |||| Sbjct 12087 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 12028 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| |||| | || || ||||| |||||||| || || || || |||||||| | || Sbjct 12027 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 11968 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCT 34929 | ||||||||||| ||||| ||||| || | ||||| || | || Sbjct 11967 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 11912 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || | |||||||||||| ||||| || || ||||| ||||||||||| Sbjct 11911 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 11860 >seq115941 Length=36387 Score = 98.7 bits (108), Expect = 6e-16 Identities = 154/215 (72%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || || ||||||||||| || || | || ||| |||| || Sbjct 5139 AACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCGAGAGTTCTCCCATCCTC 5198 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| || || || || || ||||||||| | || | ||||||||||| Sbjct 5199 AAGCTGCTTTCCAGCGAAGATAAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTG 5258 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGG 34947 |||||| ||| || || | || || | ||| || ||| || || | ||||||| Sbjct 5259 AATCTTGGCTTTCAC--AT--TGTCAATGGTGTCCGAGCTCTCCACCTCCAAAGTTATGG 5314 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||||| ||||| || || |||||||| |||||| Sbjct 5315 TTTTTCCAGTGAGGGTTTTGACAAAGATTTGCATA 5349 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | || || | ||||| || ||| ||||| ||||| || |||| | Sbjct 4666 CCACCCCTCAGACGCAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCCGCA 4725 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | |||| |||| || || || ||||| || | | || ||||| | || Sbjct 4726 AGAGTCCTGCCATCCTCCAATTGCTTCCCAGCAAAAATCAACCTCTGTTGGTCCGGGGGA 4785 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||| ||| || || | || | ||| | ||| || Sbjct 4786 ATTCCCTCCTTGTCTTGAATTTTCGCCTTTACATTGTCAATTGTATCAGAGCTCTCGACC 4845 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| |||||||||||||| || ||||||||||| || ||||| Sbjct 4846 TCGAGGGTGATGGTTTTTCCCGTAAGGGTCTTCACAAAAATTTGCAT 4892 >seq97568 Length=18938 Score = 86.0 bits (94), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 34747 AATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 |||||| |||||||||| | ||||||||| | |||| || || || || ||||| Sbjct 7144 AATCATGGTTCCTCCCCTTAGCCTCAAAACAAGATGAAGAGTTGACTCCTTTTGGATGTT 7085 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| |||| ||| ||||| |||| |||| ||| ||||||||||| || | || ||||| Sbjct 7084 ATAATCCGCAAGAGTTCGTCCATCCTCCAACTGCTTTCCGGCAAAGATCAATCTCTGCTG 7025 Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888 || | || | || ||||| || Sbjct 7024 ATCAGGAGGGATGCCTTCCTTATC 7001 >seq98793 Length=19735 Score = 82.4 bits (90), Expect = 5e-11 Identities = 105/144 (73%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 34747 AATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 |||||| |||||||||| | ||||||||| | |||| || || || || ||||| Sbjct 5352 AATCATGGTTCCTCCCCTTAGCCTCAAAACAAGATGAAGAGTTGACTCCTTTTGGATGTT 5411 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| || | ||| ||||| |||| |||| ||| ||||||||||| || | || ||||| Sbjct 5412 ATAATCAGCAAGAGTTCGTCCATCCTCCAACTGCTTTCCGGCAAAGATCAATCTCTGCTG 5471 Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888 || | || | || ||||| || Sbjct 5472 ATCAGGAGGGATGCCTTCCTTATC 5495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324109462415328