Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq116532 86.0 7e-12 >seq116532 Length=35955 Score = 86.0 bits (94), Expect = 7e-12 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||| ||||||||||| || | |||||||||||| || | ||||| || || || || Sbjct 9718 ACAAGCAAAATCACAGTGGAGTCCTTCATCTCTAGAAATAAGCTCATTTGAGAATGTCAA 9659 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG 37281 ||||||||||| || || ||||||| ||| |||||||| |||||| Sbjct 9658 GCCTGGCATTAATCCCCTCTTTTTAAGCCAGAATATTGC-ACAAAAG 9613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591335952995040