Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq60391 80.6 9e-11 >seq60391 Length=4507 Score = 80.6 bits (88), Expect = 9e-11 Identities = 85/112 (76%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 32219 CCCCACTGTTTGAAAAAGAACGGAACGCCGGCTGCGGCGCACTGGTCTCGTATGGACCGG 32278 ||||| || ||||| ||||| | ||||| ||| ||||||||||| || || ||||| Sbjct 4107 CCCCATTGCTTGAAGAAGAAGGCCACGCCCTGTGCTGCGCACTGGTCACGCATAGACCGC 4166 Query 32279 ACCCATGTTGGGTGCATGGGCCGTGCCCCAGGTCCGCTCTCGCCGCCAACGA 32330 ||||| | |||| || || || || | || |||||||||||||| |||| Sbjct 4167 ACCCACGCGGGGTTCAGTGGGCGGGCGCGCGGCCCGCTCTCGCCGCCGACGA 4218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169537671154368