Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq109654 143 2e-29 seq64237 129 4e-25 seq113932 123 2e-23 seq106905 118 7e-22 seq97232 118 7e-22 seq86460 118 7e-22 seq115941 107 1e-18 seq86116 104 2e-17 seq17851 89.7 3e-13 seq97568 82.4 5e-11 >seq109654 Length=28343 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||||| | || |||| ||| | ||| ||||||||||||||| ||||| | Sbjct 17966 CCACCCCTCAAACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCA 18025 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | || |||| |||| |||||||||||||||||||| |||||||||||| | || Sbjct 18026 AGGGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCTGGGGGA 18085 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | || | || || Sbjct 18086 ATTCCCTCCTTGTCCTGAATCTTAGCCTTAACGTTGTCGATTGTGTCTGAGCTTTCCACC 18145 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || ||||||||||| |||||||||||||| Sbjct 18146 TCGAGGGTGATGGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 18192 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| || || | ||| | || | || Sbjct 18437 AGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTACGTCCGTCC 18496 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||||||||| | ||||||||| | || | ||| |||||||| Sbjct 18497 TCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTCC 18556 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| |||| || |||||| Sbjct 18557 TGGATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTC 18616 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||| || ||||||||||| Sbjct 18617 TTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 18648 Score = 120 bits (132), Expect = 2e-22 Identities = 159/221 (72%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| || ||||| |||| |||| ||||||||||||||| ||||| | ||| | || | Sbjct 18661 CCTTAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCC 18720 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || || ||||||||||| ||||||| | ||||||||| | || | || ||||| Sbjct 18721 ATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTT 18780 Query 34882 GTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACG 34936 ||| | || || ||||||| |||| | ||| | || ||||| || | Sbjct 18781 GTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGATGAT-----TCGACTTCGAGC 18835 Query 34937 GTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| || | ||||| || ||||||||||| Sbjct 18836 GTGATCGTCTTTCCGGTCAAAGTCTTAACGAAGATCTGCAT 18876 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| || |||| ||||| |||| ||||||||| ||||| || || | ||| | || | Sbjct 18889 CCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCC 18948 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || || ||||||||||| ||||||| | ||||| || | || | || ||||| Sbjct 18949 ATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATGCCTTCCTT 19008 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 ||| | ||| || |||||| | || | || || |||||| |||| || || Sbjct 19009 GTCCTGTATCTTAGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCAAGAGTGAT 19068 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||| || | |||||| || ||||||||||| Sbjct 19069 GGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 19104 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| | ||| | || | || || || || ||||| ||||| Sbjct 18229 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCGAGCTGTTTTCCAGCGAA 18288 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | ||||||||||| | ||||| |||||| Sbjct 18289 GATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTT 18348 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| |||| ||| |||||||| || |||||||| || || Sbjct 18349 GTCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTCTTCCCGGTGAGGGTTTTCAC 18408 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 18409 AAATATCTGCAT 18420 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||||||||| || || | || |||| | || Sbjct 17753 AGAACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGACCGTCC 17812 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| || || ||||| || || ||||||||| | || | || |||||||| Sbjct 17813 TCCAATTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCC 17872 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | ||||| || || || |||| || ||| | ||| || || | || || Sbjct 17873 TGGATTTTAGCCTTTAC--AT--TATCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGAT 17928 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||| |||||||| || ||||| ||||| Sbjct 17929 GGTTTTGCCCGTAAGGGTCTTCACGAAGATTTGCAT 17964 >seq64237 Length=5233 Score = 129 bits (142), Expect = 4e-25 Identities = 172/237 (73%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||| | | || |||| ||| | || ||||||||| ||||| || |||| Sbjct 3089 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 3148 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 |||| | || | || || || ||||||||||||||||| || || |||||||| | || Sbjct 3149 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 3208 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCT 34925 | ||||||||||| | || || ||||| || | ||||| ||| | || Sbjct 3209 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCAGAAGACT 3264 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAG 34982 | || || | ||||||||| || ||||| ||||| || || |||||||||||||||| Sbjct 3265 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGATAG 3321 >seq113932 Length=32622 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||| | | || |||| ||| | || ||||||||| ||||| || |||| Sbjct 19560 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 19501 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 |||| | || | || || || ||||||||||||||||| || || |||||||| | || Sbjct 19500 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 19441 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | ||||||||||| | || || ||||| | || | ||| | ||| || Sbjct 19440 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAAC 19381 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || | ||||||||| || ||||| ||||| || || |||||||||||||| Sbjct 19380 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGAT 19330 Score = 118 bits (130), Expect = 7e-22 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||| | | || |||| ||| | || ||||||||| ||||| || |||| Sbjct 27641 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 27582 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 |||| | || | || || || ||||||||||||||||| || || |||||||| | || Sbjct 27581 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 27522 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCT 34925 | ||||||||||| | || || ||||| || | ||||| || | || Sbjct 27521 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 27466 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 | || || | ||||||||| || ||||| ||||| || || ||||||||||||| Sbjct 27465 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGA 27412 >seq106905 Length=25706 Score = 118 bits (130), Expect = 7e-22 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||| | | || |||| ||| | || ||||||||| ||||| || |||| Sbjct 9551 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 9492 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 |||| | || | || || || ||||||||||||||||| || || |||||||| | || Sbjct 9491 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 9432 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCT 34925 | ||||||||||| | || || ||||| || | ||||| || | || Sbjct 9431 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 9376 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 | || || | ||||||||| || ||||| ||||| || || ||||||||||||| Sbjct 9375 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGA 9322 >seq97232 Length=18783 Score = 118 bits (130), Expect = 7e-22 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||| | | || |||| ||| | || ||||||||| ||||| || |||| Sbjct 12287 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 12346 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 |||| | || | || || || ||||||||||||||||| || || |||||||| | || Sbjct 12347 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 12406 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCT 34925 | ||||||||||| | || || ||||| || | ||||| || | || Sbjct 12407 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 12462 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 | || || | ||||||||| || ||||| ||||| || || ||||||||||||| Sbjct 12463 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGA 12516 >seq86460 Length=13305 Score = 118 bits (130), Expect = 7e-22 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||||||| | | || |||| ||| | || ||||||||| ||||| || |||| Sbjct 12087 TCCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 12028 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 |||| | || | || || || ||||||||||||||||| || || |||||||| | || Sbjct 12027 TAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 11968 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCT 34925 | ||||||||||| | || || ||||| || | ||||| || | || Sbjct 11967 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACT 11912 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 | || || | ||||||||| || ||||| ||||| || || ||||||||||||| Sbjct 11911 CAACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGA 11858 >seq115941 Length=36387 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||||||||| || || | || | | | |||| Sbjct 5137 AGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCGAGAGTTCTCCCATCC 5196 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||| || || ||||||||| | || | ||||||||||| Sbjct 5197 TCAAGCTGCTTTCCAGCGAAGATAAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 5256 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| || | || | || | ||| || || | |||||||| Sbjct 5257 TGAATCTTGGCTTTCACATTGTCAATGGTGTCCGAGCTCTCCACCTCCAAAGTTATGGTT 5316 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| |||||||| || |||||||| ||||| Sbjct 5317 TTTCCAGTGAGGGTTTTGACAAAGATTTGCAT 5348 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| |||||| || ||||| ||||| | || | || |||| Sbjct 5365 AGAACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCTGCGAGTGTCCGGCCATCC 5424 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| |||||||||| | ||||||||| | || | |||||||| || Sbjct 5425 TCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCT 5484 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| ||| | || | || | |||||| || | || |||||| Sbjct 5485 TGAATCTTAGCTTTCACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAAAGTGATGGTC 5544 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || || || ||||| ||||| Sbjct 5545 TTTCCGGTGAGAGTTTTGACGAAGATTTGCAT 5576 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || ||||||| ||| |||||||| ||||| || |||| Sbjct 4666 CCACCCCTCAGACGCAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCCGCA 4725 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | |||| |||| |||||| || || || |||| | || ||||| | || Sbjct 4726 AGAGTCCTGCCATCCTCCAATTGCTTCCCAGCAAAAATCAACCTCTGTTGGTCCGGGGGA 4785 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | ||||| || || | || | ||| | |||||| Sbjct 4786 ATTCCCTCCTTGTCTTGAATTTTCGCCTTTACATTGTCAATTGTATCAGAGCTCTCGACC 4845 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| ||||| |||||||| |||||||| ||||| || ||||| Sbjct 4846 TCGAGGGTGATGGTTTTTCCCGTAAGGGTCTTCACAAAAATTTGCAT 4892 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||||||||||||||| | | | | |||| Sbjct 4453 AGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGCCAAAGTCCTTCCATCT 4512 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| || || || ||||| || | | |||||||| | || | ||||| ||||| Sbjct 4513 TCCAACTGTTTCCCAGCGAAAATTAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCT 4572 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | |||||| ||||| || |||| || || | ||| || || | || || Sbjct 4573 TGAATTTTTGCCTTGAC--AT--TATCAATGGTATCCGAGCTCTCCACCTCCAAAGTGAT 4628 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||||| || | |||||| ||||||||||||||| Sbjct 4629 GGTCTTTCCAGTCAAGGTCTTAACAAAGATCTGCATG 4665 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || || |||||||| | ||| |||| | || || || |||||||| ||||| Sbjct 5614 TCCTTTTGGATATTATAGTCGGCCAGGGTGCGACCGTCTTCGAGCTGCTTTCCAGCGAAA 5673 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| | ||||| ||| | || | |||||||||||| | || || ||||| Sbjct 5674 ATCAGCCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTGGATCTTAGCCTTGACATTG 5733 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | || |||||| || | || |||||||| || || ||||| || || Sbjct 5734 TCTATGGTATCCGAACTCTCGACCTCTAGAGTGATGGTCTTACCGGTTAGGGTTTTCACG 5793 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 5794 AAGATTTGCAT 5804 >seq86116 Length=13258 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| || |||||||||||||| || | ||| | || |||| Sbjct 3178 AGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAATCGGCAAGGGTCCGGCCATCC 3237 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || |||||||||| | ||||||||| | || | ||||||||||| Sbjct 3238 TCGAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 3297 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | || | || | || || |||| ||| ||||| Sbjct 3298 TGAATCTTGGCCTTGACATTGTCAATGGTATCTGAGCTTTCCACCTCAAGGGTGATGGTT 3357 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| ||||| || ||||| Sbjct 3358 TTCCCGGTGAGTGTCTTAACAAAAATTTGCAT 3389 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| |||| ||| ||| ||||||||||| || || | ||| |||| |||| Sbjct 3634 AGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCT 3693 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || |||||||| | |||||||||| | || | ||||||||||| Sbjct 3694 TCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGGATACCCTCCTTGTCT 3753 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || ||||||| || | || || |||| ||| || Sbjct 3754 TGGATCTTGGCCTTGAC--AT--TATCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGAT 3809 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || || || || |||||||||||||| Sbjct 3810 AGTTTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 3845 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| || || ||||||| ||| | | | |||| Sbjct 2494 AGGACAAGGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCCGCCAGGGTCCTCCCATCC 2553 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || ||||| || || | ||||||||| | || | ||||||||||| Sbjct 2554 TCCAGCTGCTTACCAGCGAAAATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 2613 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || |||| || || | ||| || || | ||| || Sbjct 2614 TGAATCTTGGCCTTCAC--AT--TATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAAT 2669 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || | |||||| ||||| || |||||| Sbjct 2670 AGTCTTCCCAGTCAAGGTCTTGACAAAAATTTGCATG 2706 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| ||| ||||||||| ||||||||||| | | | | || |||| || Sbjct 2953 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCCAAGGTTCGTCCATCCTCG 3012 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || || || || || | ||||||||| |||| | ||||||||||| | Sbjct 3013 AGCTGCTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGG 3072 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATT-CATTGG---CCTCGACATCAACGGTTATGGT 34944 || || ||| || || | || ||| || || ||||| || | || ||||| Sbjct 3073 ATCTTAGCTTTCAC--AT--TGTCAATTGTATCGGAACTTTCGACTTCCAAAGTAATGGT 3128 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||| || |||||| Sbjct 3129 TTTCCCGGTAAGGGTCTTCACAAAAATTTGCATG 3162 >seq17851 Length=1283 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||| ||||||||| ||||| ||||| || || | || |||| Sbjct 1082 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 1141 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||||| || || ||||| | || | ||||||||||| Sbjct 1142 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 1200 >seq97568 Length=18938 Score = 82.4 bits (90), Expect = 5e-11 Identities = 105/144 (73%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 34743 AATCAT--TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTT 34800 |||||| |||||||||| | ||||| || || |||| || |||||| || ||||| Sbjct 7144 AATCATGGTTCCTCCCCTTAGCCTCAAAACAAGATGAAGAGTTGACTCCTTTTGGATGTT 7085 Query 34801 ATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTG 34860 ||| |||| || | || |||| |||| ||||||||||| ||||||| || ||||| Sbjct 7084 ATAATCCGCAAGAGTTCGTCCATCCTCCAACTGCTTTCCGGCAAAGATCAATCTCTGCTG 7025 Query 34861 GTCTTGCGGCACCCCCTCCTTGTC 34884 || | || | || ||||| || Sbjct 7024 ATCAGGAGGGATGCCTTCCTTATC 7001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325166952282644