Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq109654 147 2e-30 seq86116 129 5e-25 seq113932 127 2e-24 seq106905 127 2e-24 seq97232 127 2e-24 seq86460 127 2e-24 seq64237 122 8e-23 seq115941 105 6e-18 seq115959 82.4 7e-11 >seq109654 Length=28343 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | ||||| ||| | || |||||| ||||||||||| ||||| Sbjct 18650 CCACCACGGAGCCTTAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 18709 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| | || || |||||||| || ||||| ||||||| ||||||||| | ||| Sbjct 18710 AGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 18769 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||| || |||| |||| | | |||||| ||||| || Sbjct 18770 ATTCCTTCCTTGTCCTGGATC-TTGGCTTTGACGTTGTCGATGGTGTCGGATGATTCGAC 18828 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||||||| || || |||||||| || || || |||||||| Sbjct 18829 TTCGAGCGTGATCGTCTTTCCGGTCAAAGTCTTAACGAAGATCTGCAT 18876 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | |||||| || | || |||||| || |||||||||||||| Sbjct 18878 CCACCACGGAGCCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCG 18937 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| | || || |||||||| || ||||| ||||||| |||||| |||| |||| Sbjct 18938 AGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGA 18997 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| ||||| ||| | |||| | | || ||| || || || Sbjct 18998 ATGCCTTCCTTGTCCTGTATCTTAGCCTTGA-CGTTGTCAATGGTATCGGAGGACTCGAC 19056 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || ||||| || || || || |||||||| Sbjct 19057 CTCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 19104 Score = 109 bits (120), Expect = 5e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | ||||| ||| | || |||||| || || |||||||||||| Sbjct 19106 CCACCACGGAGCCTGAGCACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCGGCC 19165 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || |||||||| || || || || | || ||||||||||| ||| Sbjct 19166 AGGGTTCTGCCATCTTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGAGGG 19225 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| ||||| ||| | | | | | ||||| |||| || Sbjct 19226 ATCCCCTCCTTGTCTTGAATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTC---TCG 19282 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || ||||| || | ||||| || || |||||||| Sbjct 19283 ACCTCGAGAGTGATGGTCTTACCGGTTAGGGTTTTGACGAAGATCTGCAT 19332 Score = 105 bits (116), Expect = 6e-18 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || |||||| || |||||||| ||||| | ||| || |||| || Sbjct 18211 CACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTC 18270 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||| || || || || || | ||||||||||| | |||| | |||||||||| Sbjct 18271 GAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTG 18330 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 ||| ||| || | |||| | | ||||| |||| || ||||| | ||||| | Sbjct 18331 GAT-TTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTC---TCGACCTCAAGGGTGATGG 18386 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || || | |||||||||||||||||||| Sbjct 18387 TCTTCCCGGTGAGGGTTTTCACAAATATCTGCAT 18420 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || ||||||||||| || | ||| || |||| || Sbjct 18439 CACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTACGTCCGTCCTC 18498 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || |||| || ||||||||| | || | | ||||||||| Sbjct 18499 AAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTCCTG 18558 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | |||||| || || ||||| | ||||| || | Sbjct 18559 GATCTTAGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCT 18617 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || ||||| || || || || |||||||| Sbjct 18618 TTCCAGTCAAGGTCTTGACGAAGATCTGCAT 18648 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| || | || || |||| |||| ||||| || ||||| Sbjct 17773 CTCCTTCTGAATGTTGTAATCAGCAAGAGTGCGACCGTCCTCCAATTGCTTCCCTGCAAA 17832 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || ||||||||| ||| || ||| | | | Sbjct 17833 GATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGGATTTTAGCCTTTACATT 17892 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| |||||||||| ||||| ||||| ||||| | || || Sbjct 17893 ATCAATTGTGTCAGAGCTC---TCCACCTCCAAAGTGATGGTTTTGCCCGTAAGGGTCTT 17949 Query 35722 CACAAATATCTGCAT 35736 ||| || || ||||| Sbjct 17950 CACGAAGATTTGCAT 17964 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| ||||||||||| || || | ||| || | || || Sbjct 17983 CACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCCTC 18042 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || |||||| || || || |||| || |||||||| | |||| | |||||||||| | Sbjct 18043 CAACTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCTGGGGGAATTCCCTCCTTGTCC-T 18101 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 || || || | | |||| | | ||||| ||| ||||||||| | ||||| | Sbjct 18102 GAATCTTAGCCTTAACGTTGTCGATTGTGTCTGAGCT---TTCCACCTCGAGGGTGATGG 18158 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || || | || || ||||| |||||||| Sbjct 18159 TCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 18192 >seq86116 Length=13258 Score = 129 bits (142), Expect = 5e-25 Identities = 169/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||| | || ||| || |||||||||||||| || Sbjct 3619 CCACCACGGAGACGGAGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCA 3678 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || ||||| |||| || |||||||| | ||| Sbjct 3679 AGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGG 3738 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | | | | |||||| ||||||| Sbjct 3739 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACC 3798 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742 || | ||||| ||||| || || | |||||||||||| ||||||| |||||| Sbjct 3799 TCAAGGGTGATAGTTTTTCCGGTAAGAGTTTTCACAAAGATCTGCA-TCTGTG 3850 Score = 109 bits (120), Expect = 5e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || |||| ||| | | | || |||||||||||||| || || Sbjct 2514 CTCCTTCTGGATATTGTAGTCCGCCAGGGTCCTCCCATCCTCCAGCTGCTTACCAGCGAA 2573 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||||| || |||||||||| ||||| ||||| | | Sbjct 2574 AATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 2633 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||||| || || || || || ||||| || || Sbjct 2634 ATCAATTGTGTCTGAGCTC---TCAACCTCCAAGGTAATAGTCTTCCCAGTCAAGGTCTT 2690 Query 35722 CACAAATATCTGCAT 35736 ||||| || ||||| Sbjct 2691 GACAAAAATTTGCAT 2705 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||| || | || |||||| || ||||| || |||||| Sbjct 2935 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCC 2994 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 |||||||| | || || |||||||| || ||||| || | || |||||||| | || Sbjct 2995 AAGGTTCGTCCATCCTCGAGCTGCTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGG 3054 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| |||| | | | | || ||| ||| || Sbjct 3055 ATACCCTCCTTGTCCTGGATCTTAGCTTTCACATTGTCAATTGTATCGGAACTTTCGACT 3114 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || ||||| || || | || |||||||| || ||||| Sbjct 3115 TCCAAAGTAATGGTTTTCCCGGTAAGGGTCTTCACAAAAATTTGCAT 3161 Score = 105 bits (116), Expect = 6e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | || ||||| |||| || |||||| || |||||||| || || Sbjct 2707 CCCCCACGCAGACGCAGTACCAAGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCA 2766 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | | |||| || |||||||| || ||||| ||||||||||||||||| | || Sbjct 2767 AGGGTCCTCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGGG 2826 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | |||||| || |||||| ||| | | | | | || || ||| ||| Sbjct 2827 ATACCCTCCTTATCTTGGATCTTCGCCTTAACATTGTCGATGGTATCCGAGCT---TTCA 2883 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||||| ||||| || ||||| || |||||||| || ||||| Sbjct 2884 ACTTCAAGGGTGATGGTTTTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 2933 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||||||||| | || || |||| || |||||||| || || || Sbjct 3427 TCTTTCTGGATGTTGTAATCGGCAAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 3486 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | ||||||||| | || | | |||||||| ||||| ||| | ||| Sbjct 3487 ATCAATCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGA-CGTT 3545 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| ||| ||||||| ||||| ||||| || || | ||||| || Sbjct 3546 GTCAATTGTGTCGGAGCTTTCGACCTCCAAGGTGATGGTTTTTCCAGTAAGGGTTTTGAC 3605 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 3606 AAAGATTTGCAT 3617 >seq113932 Length=32622 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || ||||||||||| || | |||||| |||| || Sbjct 27623 CACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCCTC 27564 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||||| || | || |||||||||| Sbjct 27563 GAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 27504 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | |||||| || || ||||| | || || ||||| Sbjct 27503 GATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTTTT 27444 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | |||||||| || |||||||| Sbjct 27443 ACCCGTTAGGGTTTTCACGAAGATCTGCAT 27414 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || ||||||||||| || | |||||| |||| || Sbjct 19542 CACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCCTC 19483 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||||| || | || |||||||||| Sbjct 19482 GAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 19423 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | ||||| || || ||||| | || || ||||| Sbjct 19422 GATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAACCTCTAGGGTTATGGTTTT 19363 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | |||||||| || |||||||| Sbjct 19362 ACCCGTTAGGGTTTTCACGAAGATCTGCAT 19333 >seq106905 Length=25706 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || ||||||||||| || | |||||| |||| || Sbjct 9533 CACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCCTC 9474 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||||| || | || |||||||||| Sbjct 9473 GAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 9414 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | |||||| || || ||||| | || || ||||| Sbjct 9413 GATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTTTT 9354 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | |||||||| || |||||||| Sbjct 9353 ACCCGTTAGGGTTTTCACGAAGATCTGCAT 9324 >seq97232 Length=18783 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || ||||||||||| || | |||||| |||| || Sbjct 12305 CACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCCTC 12364 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||||| || | || |||||||||| Sbjct 12365 GAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 12424 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | |||||| || || ||||| | || || ||||| Sbjct 12425 GATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTTTT 12484 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | |||||||| || |||||||| Sbjct 12485 ACCCGTTAGGGTTTTCACGAAGATCTGCAT 12514 >seq86460 Length=13305 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || ||||||||||| || | |||||| |||| || Sbjct 12069 CACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCCTC 12010 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||||| || | || |||||||||| Sbjct 12009 GAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 11950 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | |||||| || || ||||| | || || ||||| Sbjct 11949 GATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTTTT 11890 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | |||||||| || |||||||| Sbjct 11889 ACCCGTTAGGGTTTTCACGAAGATCTGCAT 11860 >seq64237 Length=5233 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || ||||||||||| || | |||||| |||| || Sbjct 3107 CACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGGCCGTCCTC 3166 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||||| || | || |||||||||| Sbjct 3167 GAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 3226 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | ||||| || || ||||| | || || ||||| Sbjct 3227 GATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCTAGGGTTATGGTTTT 3286 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | |||||||| || |||||||| Sbjct 3287 ACCCGTTAGGGTTTTCACGAAGATCTGCAT 3316 >seq115941 Length=36387 Score = 105 bits (116), Expect = 6e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| |||||||||||||| || Sbjct 5122 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCG 5181 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | | || || |||||||| || || || || | |||||||||||| | || Sbjct 5182 AGAGTTCTCCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGCCGCTGCTGGTCTGGGGGG 5241 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || ||||||||| ||||| |||| | | | | ||||| |||| ||| Sbjct 5242 ATGCCCTCCTTGTCTTGAATCTTGGCTTTCACATTGTCAATGGTGTCCGAGCTC---TCC 5298 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || || ||||| || || | ||||| ||||| || ||||| Sbjct 5299 ACCTCCAAAGTTATGGTTTTTCCAGTGAGGGTTTTGACAAAGATTTGCAT 5348 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||| || || ||||| || | | || |||| ||| || || || || Sbjct 4473 CTCCTTCTGAATGTTATAGTCAGCCAAAGTCCTTCCATCTTCCAACTGTTTCCCAGCGAA 4532 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663 || |||| ||||||||||| || | || ||| |||| | ||| ||||| ||| | | Sbjct 4533 AATTAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGT-CTTGAATTTTTGCCTTGACAT 4591 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | || || |||| |||||||||| ||||| || || || ||||| || | Sbjct 4592 TATCAATGGTATCCGAGCTC---TCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCT 4648 Query 35721 TCACAAATATCTGCAT 35736 | ||||| |||||||| Sbjct 4649 TAACAAAGATCTGCAT 4664 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| || | || | | || |||| ||||| || ||||| Sbjct 4702 TCCTTCTGGATGTTGTAATCCGCAAGAGTCCTGCCATCCTCCAATTGCTTCCCAGCAAAA 4761 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 ||||||| ||| ||||||| |||| | |||||||| | ||| ||| | ||| | | | Sbjct 4762 ATCAACCTCTGTTGGTCCGGGGGAATTCCCTCCTTGT-CTTGAATTTTCGCCTTTACATT 4820 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || |||| || ||||| | ||||| ||||| ||||| | || || Sbjct 4821 GTCAATTGTATCAGAGCTC---TCGACCTCGAGGGTGATGGTTTTTCCCGTAAGGGTCTT 4877 Query 35722 CACAAATATCTGCATTC 35738 |||||| || ||||||| Sbjct 4878 CACAAAAATTTGCATTC 4894 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | ||| | ||| | || ||||||||| ||||||||||||| Sbjct 4892 TTCCACCACGGAGACGAAGCACTAGATGGAGAGTGGACTCCTTTTGTATGTTGTAATCGG 4951 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | || | |||| || || ||||| || ||||| || | | ||||||||| | | Sbjct 4952 CAAGTGTCCTTCCGTCCTCGAGTTGCTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGTG 5011 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 | | | |||||| || ||||||| ||| | | | | | || || |||| | Sbjct 5012 GGATACCCTCCTTATCTTGGATCTTTGCCTTGACATTGTCAATAGTATCGGAGCTC---T 5068 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||||| || || ||||| || || | || || ||||| |||||||| Sbjct 5069 CAACCTCCAATGTTATTGTTTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 5120 >seq115959 Length=35228 Score = 82.4 bits (90), Expect = 7e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||||||||| || || | || || |||||||| || ||||| Sbjct 17450 CCTTTCTGGATGTTGTAATCGGCCAATGTGCGGCCATCCTCAAGCTGCTTTCCGGCAAAA 17391 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAA 35630 ||||| ||||||||||| | ||||| Sbjct 17390 ATCAAACGCTGCTGGTCTGGAGGAA 17366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450047108338080