Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq59712 104 2e-17 >seq59712 Length=4387 Score = 104 bits (114), Expect = 2e-17 Identities = 129/174 (74%), Gaps = 7/174 (4%) Strand=Plus/Minus Query 97664 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97723 ||||| ||||| | ||| |||| || ||||| || || ||||| || || |||| | Sbjct 4274 GTTGGCCTTGATCAAGCCCGTGATCACGTCCACCGAAGGACGCTGGGTGGCGAGGATCAA 4215 Query 97724 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCGACTTCT 97781 || |||||||| || || |||||||||||||| || | || ||| | |||| | Sbjct 4214 GTGGATACCGGCGGCACGGGCCTTCTGGGCGATACGTGCGATCAGTT--CTTCGA---CC 4160 Query 97782 TTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATG 97835 |||||| | || |||||| | ||| |||| |||||||||||| ||||||||| Sbjct 4159 TTCTTGCCGACGATCATCATCATGTCGGCGAATTCGTCGACCACCACCACGATG 4106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350894945942752