Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_026585.1 Length=60727 Score E Sequences producing significant alignments: (Bits) Value seq62642 84.2 8e-12 >seq62642 Length=4899 Score = 84.2 bits (92), Expect = 8e-12 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 44157 TCGATTGGGTGATCGTCGGCGGCGAGTCCGGCCGCGGCGCTCGGCCGATGCACCCCGACT 44216 |||| ||||| |||||||| |||||| |||| | |||| | |||||| |||| || | Sbjct 4808 TCGACTGGGTCATCGTCGGTGGCGAGAGTGGCCCCCGCGCCAGACCGATGGACCCGGAGT 4749 Query 44217 GGGCGCGGTCACTCCGGGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAGCAA 44275 ||| ||| || ||||||||||| | |||||||||| | ||| | ||||||||| Sbjct 4748 GGGTCCGGGAGGTCAGGGACCAATGCGTCGTGGCCGGTGTGGCCTTCTTCTTCAAGCAA 4690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193899286233368