Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_027384.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq124742 125 2e-24 >seq124742 Length=51505 Score = 125 bits (138), Expect = 2e-24 Identities = 126/161 (78%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 26120 CGATGCAGGAAGCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 26179 ||||||||||||| ||||||||||| || || || |||||||| |||||||| |||| Sbjct 24004 CGATGCAGGAAGCCACCGGCAAGGCAGTAAGCGAGACCGTCGCCGAATTCTCCAAACTGG 24063 Query 26180 CCGACGAACCAGTCAAAGCCTC-GCAACAGCTCAACGAGAAATATCACTACCTGACCGCC 26238 | ||||| || || || |||| || | ||| || ||| | || ||||||||||| ||| Sbjct 24064 CAGACGACCCGGTAAAGTCCTCTGCTGC-GCTGAATGAGCAGTACCACTACCTGACGGCC 24122 Query 26239 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAACAAGGCGA 26279 ||||||||| ||| || || || || || ||||| ||||| Sbjct 24123 TCGGTTTACTCGCAAATCGCGGCACTGGAGCAACAGGGCGA 24163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119239322801752