Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq86116 194 2e-44 seq115941 183 3e-41 seq109654 165 9e-36 seq113932 150 2e-31 seq64237 150 2e-31 seq106905 141 1e-28 seq97232 141 1e-28 seq86460 141 1e-28 seq98715 107 2e-18 seq98793 95.1 1e-14 seq97568 95.1 1e-14 seq17851 93.3 5e-14 >seq86116 Length=13258 Score = 194 bits (214), Expect = 2e-44 Identities = 182/230 (79%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | || || ||||||||||| | ||||||||| || | Sbjct 2705 ATGCAAATTTTTGTCAAGACCTTGACTGGGAAGACTATTACCTTGGAGGTTGAG--AGCT 2648 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| ||||||| || ||||||||||||||||| ||||||||||||| Sbjct 2647 CAGACACAATTGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACC 2588 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || ||||| ||||||||||| || ||||||| | ||||| || ||||| | Sbjct 2587 AGCAGAGGCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGGAGGACCCTGGCGGACTACA 2528 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || |||| ||||| || || || || || ||| | ||||| || |||||| Sbjct 2527 ATATCCAGAAGGAGTCTACCCTGCACCTTGTCCTTCGTCTCCGAGGTGGA 2478 Score = 178 bits (196), Expect = 1e-39 Identities = 178/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || ||||| || || || || |||||||| || || | Sbjct 3389 ATGCAAATTTTTGTTAAGACACTCACCGGGAAAACCATCACCCTTGAGGTGGAA--AGCT 3332 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| | ||||| || ||||||||||||||||| ||||| ||||||| Sbjct 3331 CAGATACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACC 3272 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || || |||||||||||||||||||||| || ||||| || || |||| Sbjct 3271 AGCAGAGGTTGATCTTCGCTGGTAAGCAACTCGAGGATGGCCGGACCCTTGCCGATTATA 3212 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || |||||||| ||||| | || | ||||| || ||||| Sbjct 3211 ACATTCAGAAAGAATCCACCCTTCACTTGGTTCTCCGTCTCCGTGGTGG 3163 Score = 174 bits (192), Expect = 2e-38 Identities = 177/229 (77%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| |||||||| || || |||||| | || || || || | Sbjct 3161 ATGCAAATTTTTGTGAAGACCCTTACCGGGAAAACCATTACTTTGGAAGTCGAA--AGTT 3104 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| ||| |||| ||||| || |||||||||||||| || || || |||| Sbjct 3103 CCGATACAATTGACAATGTGAAAGCTAAGATCCAGGACAAGGAGGGTATCCCGCCTGACC 3044 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || ||||||||||| ||||| |||||||||| || ||| | || ||||||| Sbjct 3043 AGCAAAGGCTCATTTTTGCTGGCAAGCAGCTCGAGGATGGACGAACCTTGGCCGACTATA 2984 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || || ||||| | || |||||||| || ||||| Sbjct 2983 ACATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGTGG 2935 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || |||||||| || ||||| || |||||||| || || | Sbjct 3845 ATGCAGATCTTTGTGAAAACTCTTACCGGAAAAACTATCACCCTTGAGGTGGAA--AGCT 3788 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | ||||| || || || ||||||||||| || |||||||||| Sbjct 3787 CCGACACCATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCAGACC 3728 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || || |||||||| ||||| || || |||| ||| ||||| || || || | Sbjct 3727 AGCAAAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGTCGCACCCTTGCTGATTACA 3668 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || || |||||||||||| | || | ||||| || ||||| Sbjct 3667 ACATTCAGAAAGAGTCCACTCTTCATTTGGTGCTCCGTCTCCGTGGTGG 3619 Score = 141 bits (156), Expect = 1e-28 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| | || || || || || || ||||| ||||| || | Sbjct 2933 ATGCAAATCTTTGTGAAGACCTTGACTGGGAAAACCATCACCCTTGAAGTTGAA--AGCT 2876 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| | ||||| || || || || |||||||| || || ||||||| Sbjct 2875 CGGATACCATCGACAATGTTAAGGCGAAGATCCAAGATAAGGAGGGTATCCCCCCAGACC 2816 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||||| | || |||||||| ||||| || ||||| | | ||||| || ||||| | Sbjct 2815 AGCAGCGGTTGATCTTTGCTGGCAAGCAGCTTGAGGACGGGAGGACCCTTGCTGACTACA 2756 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| |||||||| || | || ||||||| || || || Sbjct 2755 ACATCCAGAAGGAGTCCACTCTACACTTGGTACTGCGTCTGCGTGGGGG 2707 Score = 132 bits (146), Expect = 5e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||||||||| || ||||| || || || || || | ||||| || || | Sbjct 3617 ATGCAAATCTTTGTCAAAACCCTTACTGGAAAAACCATCACCTTGGAGGTCGAA--AGCT 3560 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| || | ||||| || ||||| |||||||| || || || ||||||| Sbjct 3559 CCGACACAATTGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCACCAGACC 3500 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | ||||| ||||| ||||| || ||||| | ||||| || || || || | Sbjct 3499 AGCAGAGATTGATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACTCTTGCCGATTACA 3440 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || |||||||| ||||| | || | ||||| || ||||| Sbjct 3439 ACATCCAGAAAGAATCCACCCTTCACTTGGTACTCCGTCTCCGTGGTGG 3391 >seq115941 Length=36387 Score = 183 bits (202), Expect = 3e-41 Identities = 179/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || || ||||| ||||| || ||||| ||||| ||| || | Sbjct 5804 ATGCAAATCTTCGTGAAAACCCTAACCGGTAAGACCATCACTCTAGAGGTCGAG--AGTT 5747 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| | |||||||| || || ||||||||||| ||||| ||||| | Sbjct 5746 CGGATACCATAGACAATGTCAAGGCTAAGATCCAAGACAAGGAGGGGATTCCCCCAGATC 5687 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || ||||| ||||| ||||| ||||| || | ||| ||||| || ||||||| Sbjct 5686 AGCAGAGGCTGATTTTCGCTGGAAAGCAGCTCGAAGACGGTCGCACCCTGGCCGACTATA 5627 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||||||||||| || || ||| | || | |||||||| || || Sbjct 5626 ATATCCAAAAGGAATCGACCCTCCATTTGGTACTCCGTCTTCGTGGCGG 5578 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| ||||| || || || || || || ||||| ||| Sbjct 4893 AATGCAAATTTTTGTGAAGACCCTTACGGGAAAAACCATCACCCTCGAGGTCGAGAGCTC 4834 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| ||| | ||||| |||||||| ||||||||||||||||| || ||||| Sbjct 4833 TGATACAATTGACAATGTAAAGGCGAAAATTCAAGACAAGGAGGGAATTCCCCCGGACCA 4774 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | ||||||||||| |||||| | ||||||| | || || || || || || Sbjct 4773 ACAGAGGTTGATTTTTGCTGGGAAGCAATTGGAGGATGGCAGGACTCTTGCGGATTACAA 4714 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || ||||| || || ||||||| | ||||| Sbjct 4713 CATCCAGAAGGAATCAACCCTTCACCTTGTGCTGCGTCTGAGGGGTGG 4666 Score = 159 bits (176), Expect = 4e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || || ||||| ||||| || ||| | ||||| ||| || | Sbjct 5576 ATGCAAATCTTCGTCAAAACTCTCACCGGAAAGACCATCACTTTGGAGGTCGAG--AGCT 5519 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || |||| ||||| ||||| || |||||||| ||||| ||||||| Sbjct 5518 CGGACACCATCGACAACGTGAAAGCTAAGATTCAAGATAAGGAGGGCATTCCCCCAGACC 5459 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || || ||||| |||||||| ||||||| || || || |||||||| | Sbjct 5458 AGCAGAGGTTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGGACACTCGCAGACTACA 5399 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||| || || ||||| | || | |||||||| || || Sbjct 5398 ACATCCAAAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTTCGTGGAGG 5350 Score = 158 bits (174), Expect = 1e-33 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| |||||||| || || || || | ||||||||| || | Sbjct 5120 ATGCAGATTTTTGTTAAGACCCTTACCGGGAAAACAATAACATTGGAGGTTGAG--AGCT 5063 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| ||| | ||||| || || || || |||||||| || || ||||||| Sbjct 5062 CCGATACTATTGACAATGTCAAGGCAAAGATCCAAGATAAGGAGGGTATCCCACCAGACC 5003 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| || |||||||||||||| | | || || || || || | Sbjct 5002 AGCAGAGACTTATCTTTGCCGGAAAGCAACTCGAGGACGGAAGGACACTTGCCGATTACA 4943 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | | |||||||| |||||||| |||||||| | ||||| || |||||| Sbjct 4942 ACATACAAAAGGAGTCCACTCTCCATCTAGTGCTTCGTCTCCGTGGTGGA 4893 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| || ||| | ||||| ||| || | Sbjct 4664 ATGCAGATCTTTGTTAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTGGAG--AGCT 4607 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| | ||||| |||||||| ||||| ||||| || || || |||| Sbjct 4606 CGGATACCATTGATAATGTCAAGGCAAAAATTCAAGACAAAGAGGGCATCCCACCGGACC 4547 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | ||||||| ||||| || || | || |||| | || | || ||||||| Sbjct 4546 AGCAGAGGTTAATTTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTTTGGCTGACTATA 4487 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || ||||| ||||||||||| || ||| | |||||||| ||||| Sbjct 4486 ACATTCAGAAGGAGTCCACTCTTCACCTTGTCCTCCGTCTTCGTGGTGG 4438 Score = 141 bits (156), Expect = 1e-28 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||||||||| || || || || || || || ||| | ||||| ||| || | Sbjct 5348 ATGCAAATCTTTGTCAAAACCCTCACTGGAAAAACCATAACTTTGGAGGTGGAG--AGCT 5291 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| |||| || || ||||| ||||||||||| || || ||||||| Sbjct 5290 CGGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAGGGCATCCCCCCAGACC 5231 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||||| || || || ||||| ||||| || ||||||| | || || || || || | Sbjct 5230 AGCAGCGGCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGGAGAACTCTCGCTGATTACA 5171 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || ||||| || || || || | || | |||||||| ||||| Sbjct 5170 ACATTCAGAAGGAGTCTACCCTCCACTTGGTTCTCCGTCTTCGTGGTGG 5122 >seq109654 Length=28343 Score = 165 bits (182), Expect = 9e-36 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || || ||||| ||||| || || |||||||| ||| || | Sbjct 18420 ATGCAGATATTTGTGAAAACCCTCACCGGGAAGACCATCACCCTTGAGGTCGAG--AGCT 18363 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||||| ||||| |||||||||||||||||||| ||||||| Sbjct 18362 CCGACACAATCGACAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGACC 18303 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||| || || |||||||| | |||||||| || ||||| | Sbjct 18302 AGCAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGACGGCCGTACCCTTGCCGACTACA 18243 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || ||||| ||| | || | ||||| || || || Sbjct 18242 ACATCCAGAAGGAGTCGACTCTCCATTTGGTGCTTCGTCTCCGTGGAGG 18194 Score = 163 bits (180), Expect = 3e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||| ||||| || ||||||||||| ||||| Sbjct 19104 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCCTCC 19045 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | |||||||| || ||||||||||| || |||||||| || ||| Sbjct 19044 GATACCATTGACAACGTCAAGGCTAAGATACAGGACAAGGAAGGCATTCCTCCGGATCAG 18985 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| |||||||||| || ||||| || || || || Sbjct 18984 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGATTACAAC 18925 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| ||||| ||||| Sbjct 18924 ATCCAGAAGGAGTCCACCCTTCA 18902 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| ||||| ||||| || || ||| | ||||| ||| | Sbjct 17964 ATGCAAATCTTCGTGAAGACCCTTACGGGCAAAACCATCACTTTGGAGGTGGAGAGCTCT 17905 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||||||||| ||||||||||| || || || ||||||||| Sbjct 17904 GACACAATTGATAATGTAAAGGCTAAAATCCAGGACAAGGAAGGCATCCCACCAGACCAG 17845 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || |||||| | ||||| | ||| || || || || || || Sbjct 17844 CAGCGTCTCATCTTTGCAGGGAAGCAATTGGAGGACGGTCGCACTCTTGCTGATTACAAC 17785 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| || || | ||||| || ||||| Sbjct 17784 ATTCAGAAGGAGTCTACCCTTCACCTTGTTCTCCGTCTCCGTGGTGG 17738 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || ||||| ||||| || ||||| ||||| ||| || | Sbjct 19332 ATGCAGATCTTCGTCAAAACCCTAACCGGTAAGACCATCACTCTCGAGGTCGAG--AGCT 19275 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | ||||| || ||||| ||||||||||| || ||||| |||| Sbjct 19274 CCGACACCATCGACAATGTTAAGGCCAAGATTCAAGACAAGGAGGGGATCCCTCCGGACC 19215 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || ||||| ||||| ||||| |||| | ||||| || || || | Sbjct 19214 AGCAGAGGCTTATCTTCGCTGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCCGATTACA 19155 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| || ||||||||||| || | | || || ||||| Sbjct 19154 ATATCCAGAAGGAGTCGACTCTTCATCTGGTGCTCAGGCTCCGTGGTGG 19106 Score = 143 bits (158), Expect = 3e-29 Identities = 156/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || || ||||| || || || ||||| || || | Sbjct 18192 ATGCAGATCTTTGTCAAGACCCTCACAGGGAAGACCATCACCCTCGAGGTGGAA--AGCT 18135 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | |||||||| ||||||||||||||||||||||| ||||||| Sbjct 18134 CAGACACAATCGACAACGTTAAGGCTAAGATTCAGGACAAGGAGGGAATTCCCCCAGACC 18075 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || || || || ||||| | ||||||| |||||||| || ||||| | Sbjct 18074 AGCAACGTCTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACCCTTGCTGACTACA 18015 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | | || ||||| || || || || Sbjct 18014 ACATTCAGAAGGAGTCGACCCTGCA 17990 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || ||||| || ||||||||||| ||||| Sbjct 18648 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCCTCC 18589 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | |||||||| || ||||||||||| || || || ||||||||| Sbjct 18588 GACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGGATCCCCCCAGACCAG 18529 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || || || ||||| || ||||| | |||||||| || || || || Sbjct 18528 CAGAGGCTGATCTTCGCCGGAAAGCAGCTTGAGGACGGACGTACCCTCGCTGATTACAAC 18469 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || | || | ||||| || || || Sbjct 18468 ATCCAGAAGGAGTCCACACTCCACTTGGTGCTTCGTCTCCGTGGCGG 18422 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | ||||| ||||| || || || || || || ||| Sbjct 18876 ATGCAGATCTTCGTTAAGACTTTGACCGGAAAGACGATCACGCTCGAAGTCGAATCATCC 18817 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | || || || || ||||||||||| |||||||| ||||||||| Sbjct 18816 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 18757 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| || || |||| || ||||| || ||||| || Sbjct 18756 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGAACCCTCGCCGACTACAAC 18697 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| |||||||| || | | || || ||||| Sbjct 18696 ATTCAGAAGGAGTCCACCCTTCATCTGGTGCTAAGGCTCCGTGGTGG 18650 >seq113932 Length=32622 Score = 150 bits (166), Expect = 2e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| || || || || || || || || || || || ||||||||||| Sbjct 19330 ATCATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCT 19389 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||| | ||||| ||| | ||||| || || |||||||||||||| || || || ||| Sbjct 19390 TCTGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGAC 19449 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || || || ||||| |||||||| | || |||||||| || || Sbjct 19450 CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTAC 19509 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 || |||| ||||| || ||||| || Sbjct 19510 AACATCCAGAAGGAGTCGACTCTCCA 19535 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || || || || || || ||||||||||| Sbjct 27414 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 27473 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 27474 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 27533 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||| | || |||||||| || || || Sbjct 27534 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 27593 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| || ||||| || Sbjct 27594 ATCCAGAAGGAGTCGACTCTCCA 27616 >seq64237 Length=5233 Score = 150 bits (166), Expect = 2e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 |||| ||||| ||||| || || || || || || || || || || || |||||||||| Sbjct 3321 CTATCATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGT 3262 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | ||| | ||| | ||| | ||||| || || |||||||||||||| || || || | Sbjct 3261 CTTCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGG 3202 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||||||||||| || || || || ||||| |||||||| | || |||||||| || | Sbjct 3201 ACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATT 3142 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCA 27608 | || |||| ||||| || ||||| || Sbjct 3141 ACAACATCCAGAAGGAGTCGACTCTCCA 3114 >seq106905 Length=25706 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || || || || || || ||||||||||| Sbjct 9324 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 9383 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 9384 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 9443 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||| | || |||||||| || || || Sbjct 9444 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 9503 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| || ||||| || Sbjct 9504 ATCCAGAAGGAGTCGACTCTCCA 9526 >seq97232 Length=18783 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || || || || || || ||||||||||| Sbjct 12514 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 12455 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 12454 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 12395 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||| | || |||||||| || || || Sbjct 12394 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 12335 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| || ||||| || Sbjct 12334 ATCCAGAAGGAGTCGACTCTCCA 12312 >seq86460 Length=13305 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || || || || || || ||||||||||| Sbjct 11860 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTTGAGTCTTCC 11919 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 11920 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 11979 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||| | || |||||||| || || || Sbjct 11980 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTAGCGGATTACAAC 12039 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| || ||||| || Sbjct 12040 ATCCAGAAGGAGTCGACTCTCCA 12062 >seq98715 Length=19641 Score = 107 bits (118), Expect = 2e-18 Identities = 342/526 (65%), Gaps = 17/526 (3%) Strand=Plus/Minus Query 24584 CGAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCG--TTTGACCAACCCGAG 24641 ||||||||| ||||| || || ||||| ||||| || ||| || || || ||| Sbjct 13252 CGAGGTCTACAACCTGGGCGCACAGTCCCACGTT--GCCGTCAGCTTCGAGTCGCCGGAG 13195 Query 24642 TACACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNN 24701 ||||| || | |||||||| | |||||||| | |||||||| ||||| ||| Sbjct 13194 TACACCGCAGATGTGGATGCCATGGGCACCCTGCGTATTCTTGAGGCAATCCGCCTGCTC 13135 Query 24702 NNNNNNNNNTTGAAATTCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTG 24761 || | | || || ||||| || ||| | | || |||| Sbjct 13134 GGTCTCGAGAAAAAGACCCGTTTCTACCAGGCTTCGACCTCTGAACTCTACGGGCTGGTG 13075 Query 24762 CAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCA 24821 ||||| || || ||| ||| ||||| || ||||||||||| || |||| || || Sbjct 13074 CAGGAAACCCCGCAGAAGGAAACCACACCGTTTTATCCGCGCTCGCCATATGCCGTAGCA 13015 Query 24822 AAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGC 24881 ||| | | ||| |||||||| |||||||| || ||| |||| || |||| ||| Sbjct 13014 AAGCTTTACGCCTACTGGATTGTGGTCAACTACCGCGAAGCCTATGGCATGCATGCCTGC 12955 Query 24882 AACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAA--TTTGTTACACGAA 24939 ||||| || || |||||||| |||||| || || || | || || || || || | Sbjct 12954 AACGGCATCCTCTTCAACCACGAGTCGCCACGCCGCGG--CGAAACGTTCGTGACCCGCA 12897 Query 24940 AGATTACTCTTGGTATTGACCAT-TGGATCAAGAC----AAGGGCACCTATTGAGCTGGG 24994 |||| |||| || | | | || | | |||| | || | ||| | | |||| Sbjct 12896 AGATCACTCGCGGCCTGGCCAATATCGCCCAAGGCCTTGAACAGTGCCTCT--ACATGGG 12839 Query 24995 AAACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGT-CGACGCCATGTGGC 25053 ||| | ||||| || || ||||| || || |||||||| || || |||| Sbjct 12838 CAACATGGATGCGCTGCGCGACTGGGGCCACGCCAAGGACTACGTCCGTATGCA-GTGGA 12780 Query 25054 GCATGCTCCAACAGAATAAGCCAGAGGATTTTGTGATCGGCACCGG 25099 ||||| |||||| | | ||||| || || || |||| |||||| Sbjct 12779 TGATGCTGCAACAGGACACCCCAGAAGACTTCGTTATCGCCACCGG 12734 >seq98793 Length=19735 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||||| ||||| || || ||||| || |||||| | | || ||||| || ||||| Sbjct 5500 TTCAGGATAAGGAAGGCATCCCTCCTGATCAGCAGAGATTGATCTTTGCCGGAAAGCAGT 5441 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 | ||||||| || || || || || ||||| |||||||||| || ||||||||||| | Sbjct 5440 TGGAGGATGGACGAACTCTTGCTGATTATAACATCCAAAAGGAGTCAACTCTTCATCTTG 5381 Query 27614 TCTTG 27618 | ||| Sbjct 5380 TTTTG 5376 >seq97568 Length=18938 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||||| ||||| || || ||||| || |||||| | | || ||||| || ||||| Sbjct 6996 TTCAGGATAAGGAAGGCATCCCTCCTGATCAGCAGAGATTGATCTTTGCCGGAAAGCAGT 7055 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 | ||||||| || || || || || ||||| |||||||||| || ||||||||||| | Sbjct 7056 TGGAGGATGGACGAACTCTTGCGGATTATAACATCCAAAAGGAGTCAACTCTTCATCTTG 7115 Query 27614 TCTTG 27618 | ||| Sbjct 7116 TTTTG 7120 >seq17851 Length=1283 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || ||||| ||||| | || || || || ||||| || ||| Sbjct 1200 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCTTGATCTTCGCCGGCAAGCAGCTTGAG 1141 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| ||||| || | ||||| || |||| ||||| ||||| ||||| || || | Sbjct 1140 GATGGCCGTACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 1081 Query 27619 CGTCTTCGCGGTGG 27632 || ||||| ||||| Sbjct 1080 CGCCTTCGTGGTGG 1067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569365994493120