Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq115941 131 1e-25 seq109654 131 1e-25 seq113932 127 1e-24 seq86116 127 1e-24 seq106905 122 5e-23 seq97232 122 5e-23 seq86460 122 5e-23 seq64237 122 5e-23 seq17851 87.8 1e-12 >seq115941 Length=36387 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | |||||||||| ||||||||| ||||| ||||| | |||||| | Sbjct 4903 AGACGAAGCACTAGATGGAGAGTGGACTCCTTTTGTATGTTGTAATCGGCAAGTGTCCTT 4962 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || ||||| || |||||||| || | | ||| ||||| || || | |||||| Sbjct 4963 CCGTCCTCGAGTTGCTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCCTCC 5022 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||||||| | || || | ||| || || |||||| || |||| || Sbjct 5023 TTATCTTGGATCTTT-GCCTTGACATTGTCAATAGTATCGGAGCTCTCAACCTCCAATGT 5081 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||| ||||| | || || |||||||||||||| Sbjct 5082 TATTGTTTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 5120 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| ||||| || |||||| |||||||| ||||| | Sbjct 5122 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCG 5181 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | | || ||||| || || || || || || | ||||| ||||| || || Sbjct 5182 AGAGTTCTCCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGCCGCTGCTGGTCTGGGGGG 5241 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| || | ||| || | ||| ||||| ||||||||| Sbjct 5242 ATGCCCTCCTTGTCT-TGAATCTTGGCTTTCACATTGTCAATGGTGTCCGAGCTCTCCAC 5300 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 5301 CTCCAAAGTTATGGTTTTTCCAGTGAGGGTTTTGACAAAGATTTGCAT 5348 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| ||| | || || || ||||| || ||||| ||||| | Sbjct 4665 GCCACCCCTCAGACGCAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCCGC 4724 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || | | || || | ||| || || ||||| || || | |||||||||||| || Sbjct 4725 AAGAGTCCTGCCATCCTCCAATTGCTTCCCAGCAAAAATCAACCTCTGTTGGTCCGGGGG 4784 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||||| ||| ||| | || || | |||||| || |||||| | Sbjct 4785 AATTCCCTCCTTGTCT-TGAATTTTCGCCTTTACATTGTCAATTGTATCAGAGCTCTCGA 4843 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || ||||| || || | || ||||||||||| ||||| Sbjct 4844 CCTCGAGGGTGATGGTTTTTCCCGTAAGGGTCTTCACAAAAATTTGCAT 4892 Score = 107 bits (118), Expect = 1e-18 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG- 34537 ||| || | |||||| | || | || |||||| |||||| ||||||||||| || | Sbjct 4437 GCCACCACGAAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGC 4496 Query 34538 -AAAGT-GTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 ||||| ||| | ||||| | ||||| || || || ||||| | ||| |||||||| Sbjct 4497 CAAAGTCCTTC---CATCTTCCAACTGTTTCCCAGCGAAAATTAACCTCTGCTGGTCCGG 4553 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCT 34654 || | ||||| |||||| ||| ||||| || || || ||| || || ||||| Sbjct 4554 TGGGATGCCCTCTTTGTCT-TGAATTTTTGCCTTGACATTATCAATGGTATCCGAGCTCT 4612 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| |||| || || || || || || || || || ||||| ||||||||| Sbjct 4613 CCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTAACAAAGATCTGCATG 4665 >seq109654 Length=28343 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||||||||| |||||| || ||||| || || | ||| || || Sbjct 18203 AGACGAAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGG 18262 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || ||||| || || || || | |||||| ||||| || || | ||||||| Sbjct 18263 CCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCC 18322 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | || ||| | |||||||| |||||| || || | ||| Sbjct 18323 TTGTCCTGGAT-TTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCAAGGGT 18381 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | ||||||||||| |||||||| Sbjct 18382 GATGGTCTTCCCGGTGAGGGTTTTCACAAATATCTGCAT 18420 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || | ||| | |||||| || || || |||||| |||||||| || || | | Sbjct 17966 CCACCCCTCAAACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCA 18025 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || | || || ||||| || || | ||| || ||||| || || Sbjct 18026 AGGGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCTGGGGGA 18085 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| || | |||||| | ||||||||| ||| ||||| Sbjct 18086 ATTCCCTCCTTGTC-CTGAATCTTAGCCTTAACGTTGTCGATTGTGTCTGAGCTTTCCAC 18144 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || || || | || || ||||| |||||||| Sbjct 18145 CTCGAGGGTGATGGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 18192 Score = 91.5 bits (100), Expect = 9e-14 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||| ||||| |||||| || || || ||||| | || |||| | ||||| Sbjct 19123 CACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTTCTGCCATCTTC 19182 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || || || || || || | | ||| |||||||| || | |||||||||||| | Sbjct 19183 GAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCCTCCTTGTCT-T 19241 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 || || | ||||| | || ||||| |||||| || || | || || || | Sbjct 19242 GAATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCT 19301 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 ||||||||| ||||| || || |||||||| || Sbjct 19302 TACCGGTTAGGGTTTTGACGAAGATCTGCATATT 19335 >seq113932 Length=32622 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 19559 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 19500 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||| |||||||| || Sbjct 19499 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 19440 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | ||| ||||| ||| || Sbjct 19439 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAAC 19381 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | |||||| |||||||| |||| |||||||| || ||||||||| Sbjct 19380 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 19332 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 27640 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 27581 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||| |||||||| || Sbjct 27580 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 27521 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || ||||| ||| || Sbjct 27520 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 27462 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | |||||| |||||||| |||| |||||||| || ||||||||| Sbjct 27461 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 27413 >seq86116 Length=13258 Score = 127 bits (140), Expect = 1e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||| |||||| ||| || |||||||| ||||| | ||| || || Sbjct 3628 AGACGGAGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCAAGGGTGCGA 3687 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || || ||||| || | | || ||||| || || | |||||| Sbjct 3688 CCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGGGATACCCTCC 3747 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || || || || ||||| ||| ||||| || | ||| Sbjct 3748 TTGTCTTGGATC-TTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCAAGGGT 3806 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| | ||||||||||| |||||||| Sbjct 3807 GATAGTTTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 3845 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| || |||||||| || | | ||||| Sbjct 2944 AGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCCAAGGTTCGT 3003 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || ||||| || | | || ||||| ||||| | |||||| Sbjct 3004 CCATCCTCGAGCTGCTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGGATACCCTCC 3063 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | ||| || | |||||| || || || ||||||| || Sbjct 3064 TTGTCCTGGATC-TTAGCTTTCACATTGTCAATTGTATCGGAACTTTCGACTTCCAAAGT 3122 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| ||||| | || ||||||||||| |||||| Sbjct 3123 AATGGTTTTCCCGGTAAGGGTCTTCACAAAAATTTGCATG 3162 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||| || || |||||||||||||| | ||| || || Sbjct 3172 AGACGGAGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAATCGGCAAGGGTCCGG 3231 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || ||||| ||||| || || || || | ||| ||||| || || | |||||| Sbjct 3232 CCATCCTCGAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCC 3291 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || || | ||| || ||| ||| ||||| || | ||| Sbjct 3292 TTGTC-CTGAATCTTGGCCTTGACATTGTCAATGGTATCTGAGCTTTCCACCTCAAGGGT 3350 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| | || || |||||||| ||||| Sbjct 3351 GATGGTTTTCCCGGTGAGTGTCTTAACAAAAATTTGCAT 3389 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || || || || || | || || | | | || || || || ||||| || || Sbjct 2514 CTCCTTCTGGATATTGTAGTCCGCCAGGGTCCTCCCATCCTCCAGCTGCTTACCAGCGAA 2573 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | | ||| ||||| || || | ||||||||||| ||| || | || || Sbjct 2574 AATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTC-CTGAATCTTGGCCTTCACAT 2632 Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || |||||||||| |||||| || |||| ||| || || || || || || || || | Sbjct 2633 TATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTTCCCAGTCAAGGTCTTGA 2692 Query 34694 CAAAAATCTGCATG 34707 ||||||| |||||| Sbjct 2693 CAAAAATTTGCATG 2706 >seq106905 Length=25706 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 9550 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 9491 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||| |||||||| || Sbjct 9490 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 9431 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || ||||| ||| || Sbjct 9430 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 9372 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | |||||| |||||||| |||| |||||||| || ||||||||| Sbjct 9371 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 9323 >seq97232 Length=18783 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 12288 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 12347 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||| |||||||| || Sbjct 12348 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12407 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || ||||| ||| || Sbjct 12408 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 12466 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | |||||| |||||||| |||| |||||||| || ||||||||| Sbjct 12467 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 12515 >seq86460 Length=13305 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 12086 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 12027 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||| |||||||| || Sbjct 12026 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 11967 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || ||||| ||| || Sbjct 11966 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 11908 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | |||||| |||||||| |||| |||||||| || ||||||||| Sbjct 11907 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 11859 >seq64237 Length=5233 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 3090 CCTCCCCTGAGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 3149 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||| |||||||| || Sbjct 3150 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 3209 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || ||||| ||| || Sbjct 3210 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCAAC 3268 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | |||||| |||||||| |||| |||||||| || ||||||||| Sbjct 3269 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 3317 >seq17851 Length=1283 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | ||| | || || ||| |||||| || ||||| || || ||| Sbjct 1067 CCACCACGAAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1126 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || ||||| || || || |||||||||||||| || Sbjct 1127 AGAGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCCGGGGGG 1186 Query 34600 ACTCCCTCCTTGTCTGTG 34617 | |||||||||||| || Sbjct 1187 ATACCCTCCTTGTCTATG 1204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314221452930908