Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_028860.1 Length=52392 Score E Sequences producing significant alignments: (Bits) Value seq38075 87.8 6e-13 >seq38075 Length=2571 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 4056 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTC 4115 |||||||||||||||||| ||||| |||| |||||| ||| ||||||||||||| || Sbjct 2333 GGTCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATTC 2274 Query 4116 CCTCCTGGCCTGC 4128 ||||||| ||||| Sbjct 2273 CCTCCTGACCTGC 2261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167269245356848