Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq93341 89.7 1e-13 >seq93341 Length=16452 Score = 89.7 bits (98), Expect = 1e-13 Identities = 71/83 (86%), Gaps = 3/83 (4%) Strand=Plus/Minus Query 32550 CACTCTCCGATACAGCCTGGCGATGGGGAG--CCAGGTGGATCGGGCAGTTAACGTCAGG 32607 ||| ||||||| |||||||| | ||||||| ||||| | |||||||||||||| |||| Sbjct 1932 CACACTCCGATGCAGCCTGGTGCTGGGGAGTACCAGG-GCTTCGGGCAGTTAACGACAGG 1874 Query 32608 CTGACGTGGCGCTGGCTGTTCAG 32630 ||| ||||||||||| ||||||| Sbjct 1873 CTGTCGTGGCGCTGGTTGTTCAG 1851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138147131068968