Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_031281.1 Length=43516 Score E Sequences producing significant alignments: (Bits) Value seq60391 82.4 2e-11 >seq60391 Length=4507 Score = 82.4 bits (90), Expect = 2e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 37859 GTGATCGTCGGCGGCGAGAGCGGGCCCGGCGCTCGGCCGATGCACCCGGCCTGGGCGCGC 37918 |||||||||||||||||||||||||| |||| || || || |||| || |||| ||| Sbjct 4222 GTGATCGTCGGCGGCGAGAGCGGGCCGCGCGCCCGCCCACTGAACCCCGCGTGGGTGCGG 4163 Query 37919 TCACTCCGCGACCAATGCACGGCGGCCGATGTGCCGTTCCTGTTCAAGCAGTGGGGTGAA 37978 || | || ||||| ||| | || | ||| | ||| | |||||||| ||||| || Sbjct 4162 TCTATGCGTGACCAGTGCGCAGCACAGGGCGTGGCCTTCTTCTTCAAGCAATGGGGGGAG 4103 Query 37979 TGG 37981 ||| Sbjct 4102 TGG 4100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138910727921936