Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq113932 136 4e-27 seq106905 136 4e-27 seq97232 136 4e-27 seq86460 136 4e-27 seq109654 134 1e-26 seq64237 132 4e-26 seq17851 114 1e-20 seq115941 104 2e-17 seq86116 98.7 9e-16 >seq113932 Length=32622 Score = 136 bits (150), Expect = 4e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||||||||| ||||| || || | ||||| || Sbjct 27631 AGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGG 27572 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || || ||||| ||||||| || | || |||| Sbjct 27571 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 27512 Query 41765 TTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCG 41822 |||||| ||| || ||| || | || | |||||| ||||| ||||| | | Sbjct 27511 TTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAAGACTCAACCTCTAGGG 27454 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| ||||||||||| || || || ||||| ||||||||| Sbjct 27453 TTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 27413 Score = 129 bits (142), Expect = 5e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||||||||| ||||| || || | ||||| || Sbjct 19550 AGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGG 19491 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || || ||||| ||||||| || | || |||| Sbjct 19490 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 19431 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| || | || || | || | | | ||||| ||||| ||||| | || Sbjct 19430 TTGTCC-TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCAACCTCTAGGGT 19372 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| ||||||||||| || || || ||||| ||||||||| Sbjct 19371 TATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 19332 >seq106905 Length=25706 Score = 136 bits (150), Expect = 4e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||||||||| ||||| || || | ||||| || Sbjct 9541 AGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGG 9482 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || || ||||| ||||||| || | || |||| Sbjct 9481 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 9422 Query 41765 TTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCG 41822 |||||| ||| || ||| || | || | |||||| ||||| ||||| | | Sbjct 9421 TTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAAGACTCAACCTCTAGGG 9364 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| ||||||||||| || || || ||||| ||||||||| Sbjct 9363 TTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 9323 >seq97232 Length=18783 Score = 136 bits (150), Expect = 4e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||||||||| ||||| || || | ||||| || Sbjct 12297 AGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGG 12356 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || || ||||| ||||||| || | || |||| Sbjct 12357 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 12416 Query 41765 TTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCG 41822 |||||| ||| || ||| || | || | |||||| ||||| ||||| | | Sbjct 12417 TTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAAGACTCAACCTCTAGGG 12474 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| ||||||||||| || || || ||||| ||||||||| Sbjct 12475 TTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 12515 >seq86460 Length=13305 Score = 136 bits (150), Expect = 4e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||||||||| ||||| || || | ||||| || Sbjct 12077 AGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGG 12018 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || || ||||| ||||||| || | || |||| Sbjct 12017 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 11958 Query 41765 TTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCG 41822 |||||| ||| || ||| || | || | |||||| ||||| ||||| | | Sbjct 11957 TTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAAGACTCAACCTCTAGGG 11900 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| ||||||||||| || || || ||||| ||||||||| Sbjct 11899 TTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 11859 >seq109654 Length=28343 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || | || ||||||||| || ||| ||||||||||||||| ||||||| | Sbjct 18650 CCACCACGGAGCCTTAGCACCAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 18709 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| ||||| || |||| | ||| ||||| | |||| Sbjct 18710 AGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 18769 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| || | || |||| ||| | | | |||||| || || || Sbjct 18770 ATTCCTTCCTTGTCC-TGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGATGATTCGAC 18828 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| |||||||| Sbjct 18829 TTCGAGCGTGATCGTCTTTCCGGTCAAAGTCTTAACGAAGATCTGCAT 18876 Score = 111 bits (122), Expect = 1e-19 Identities = 159/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41647 ACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTC 41706 ||| | ||||| ||||| || ||||||||||||||| ||||| | ||||| || | Sbjct 17977 ACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCC 18036 Query 41707 GTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTT 41766 || || | |||||| |||||||| ||||| || || ||||| | ||||| | |||||| Sbjct 18037 ATCCTCCAACTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCTGGGGGAATTCCCTCCTT 18096 Query 41767 GTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCG 41822 |||| ||| | || || | |||| | | | ||||| ||| |||||||| | | Sbjct 18097 GTCC-TGAATCTTAGCCTTAACGTTGTCGATTGTGTCTGAGCT---TTCCACCTCGAGGG 18152 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || || || ||||| || || |||||||| Sbjct 18153 TGATGGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 18192 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| || || ||| ||||||||| ||||| || |||| |||||| || | || || Sbjct 18895 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTC 18954 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| ||||| || |||| | ||| || |||| |||| || ||||||||| | Sbjct 18955 GAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCC-T 19013 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 | | || || | ||| | | | || ||| ||||| ||||| | || || || | Sbjct 19014 GTATCTTAGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCAAGAGTGATGGTCT 19073 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| ||||| ||||| |||||||| Sbjct 19074 TTCCGGTCAAGGTCTTGACGAAGATCTGCAT 19104 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||||||||| || || | Sbjct 17738 CCACCACGGAGACGGAGAACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCA 17797 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || | ||||| || || || || || ||||| ||||| | || Sbjct 17798 AGAGTGCGACCGTCCTCCAATTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGG 17857 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTC 41811 | || ||||||||| |||||| ||| | | | | | ||||| ||| ||| Sbjct 17858 ATGCCTTCCTTGTCCTGGATTTTAGCCTTTACATTATCA-ATTGTGTCAGAGCT---CTC 17913 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || ||||| ||||| || ||||| ||||| || ||||| Sbjct 17914 CACCTCCAAAGTGATGGTTTTGCCCGTAAGGGTCTTCACGAAGATTTGCAT 17964 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||||||| || || ||||||||| || || || |||| ||||| | | || || Sbjct 19123 CACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAGGGTTCTGCCATCTTC 19182 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| || ||||| || || | ||| ||||||| || | | |||||||| | | Sbjct 19183 GAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCCTCCTTGT-CTT 19241 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | | |||||| ||| ||||| | || || || | Sbjct 19242 GAATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCT 19301 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| || || || || ||||| |||||||| || Sbjct 19302 TACCGGTTAGGGTTTTGACGAAGATCTGCATATT 19335 >seq64237 Length=5233 Score = 132 bits (146), Expect = 4e-26 Identities = 165/224 (74%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||||||||| ||||| || || | ||||| || Sbjct 3099 AGACGGAGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTTCGG 3158 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || || ||||| ||||||| || | || |||| Sbjct 3159 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 3218 Query 41765 TTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCG 41822 |||||| ||| || ||| || | || | ||||| ||||| ||||| | | Sbjct 3219 TTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCAGAAGACTCAACCTCTAGGG 3276 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 |||| ||||||||||| || || || ||||| ||||||||| || Sbjct 3277 TTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATGATA 3320 >seq17851 Length=1283 Score = 114 bits (126), Expect = 1e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || || || ||| ||||||||| ||||| |||||| Sbjct 1064 CCACCACCACGAAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1123 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || || || || | || || ||||||||||||||||| |||| |||||||||||||| | Sbjct 1124 GAAAGAGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCCGGG 1183 Query 41753 GGAACGCTCTCCTTGTCCATG 41773 || | | ||||||||| ||| Sbjct 1184 GGGATACCCTCCTTGTCTATG 1204 >seq115941 Length=36387 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||||||||| || || | | Sbjct 5122 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCG 5181 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | | || || |||||||| || ||||| || || ||||| ||||| | ||| Sbjct 5182 AGAGTTCTCCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGCCGCTGCTGGTCTGGGGGG 5241 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || |||||||| | ||| | || |||| || | | | ||||| ||| ||| Sbjct 5242 ATGCCCTCCTTGT-CTTGAATCTTGGCTTTCACATTGTCAATGGTGTCCGAGCT---CTC 5297 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||||| ||||| || || || || || || || || ||||| Sbjct 5298 CACCTCCAAAGTTATGGTTTTTCCAGTGAGGGTTTTGACAAAGATTTGCAT 5348 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| || ||| |||||| || ||||| || |||| Sbjct 4894 CCACCACGGAGACGAAGCACTAGATGGAGAGTGGACTCCTTTTGTATGTTGTAATCGGCA 4953 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| ||||| ||||| ||||| || || || | ||| ||||| | || Sbjct 4954 AGTGTCCTTCCGTCCTCGAGTTGCTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGG 5013 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814 | | |||||| || ||| ||| ||| | | | || ||| ||| ||| || Sbjct 5014 ATACCCTCCTTATCTTGGATCTTTGCCTTGA-CATTGTCAATAGTATCGGAGCTCTCAAC 5072 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| ||||| || || || ||||| || ||||||||||| Sbjct 5073 CTCCAATGTTATTGTTTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 5120 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||| ||| || || ||||| || || |||||||||| Sbjct 5578 CCGCCACGAAGACGGAGTACCAAATGGAGGGTCGATTCCTTTTGGATATTATAGTCGGCC 5637 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| || ||||| ||||| | ||| || || | |||| Sbjct 5638 AGGGTGCGACCGTCTTCGAGCTGCTTTCCAGCGAAAATCAGCCTCTGCTGATCTGGGGGA 5697 Query 41756 ACGCTCTCCTTGTC 41769 | | ||||||||| Sbjct 5698 ATCCCCTCCTTGTC 5711 >seq86116 Length=13258 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||||||||| ||||||||||||| Sbjct 2935 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGGCC 2994 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || | || |||||||||||||| || || || || | || ||||| | || Sbjct 2995 AAGGTTCGTCCATCCTCGAGCTGCTTGCCAGCAAAAATGAGCCTTTGCTGGTCAGGCGGG 3054 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGAC--TCCA 41813 | | |||||||||| || | || |||| || | || | ||| | || || | Sbjct 3055 ATACCCTCCTTGTCC-TGGATCTTAGCTTTCACATTGTCA-ATTGTATCGGAACTTTCGA 3112 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||| || || ||||| || || || ||||| || ||||| |||||| Sbjct 3113 CTTCCAAAGTAATGGTTTTCCCGGTAAGGGTCTTCACAAAAATTTGCATG 3162 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || ||| || |||||||||||||| |||| Sbjct 3162 GCCACCACGGAGACGGAGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTATAATCGGC 3221 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || | || ||||| ||||| || ||||| |||| | ||| ||||| | ||| Sbjct 3222 AAGGGTCCGGCCATCCTCGAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGG 3281 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGAC--TCC 41812 || | |||||||||| ||| | || || | || | || | || || | ||| Sbjct 3282 AATACCCTCCTTGTCC-TGAATCTTGGCCTTGACATTGTCA-ATGGTATCTGAGCTTTCC 3339 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || || ||||| || || || ||||| || ||||| ||||| Sbjct 3340 ACCTCAAGGGTGATGGTTTTCCCGGTGAGTGTCTTAACAAAAATTTGCAT 3389 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||| || ||| ||| ||||||||||| || || | Sbjct 3618 GCCACCACGGAGACGGAGCACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGC 3677 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| || || ||||| | || ||||| | || Sbjct 3678 AAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGAGG 3737 Query 41755 AACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGAC 41809 | | ||||||||| ||| || ||| | | | ||| | |||||| Sbjct 3738 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATG-----GTGTCGGAGCTT 3792 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| | || || ||||| || || || || || || || |||||||| Sbjct 3793 TCCACCTCAAGGGTGATAGTTTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 3845 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || ||| ||||||||| ||||| ||||| | Sbjct 2706 GCCCCCACGCAGACGCAGTACCAAGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCAGC 2765 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | |||| || ||||||||||| || || |||| ||||| ||||| | ||| Sbjct 2766 AAGGGTCCTCCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGG 2825 Query 41755 AACGCTCTCCTTGTC 41769 | | |||||| || Sbjct 2826 GATACCCTCCTTATC 2840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461538447691200