Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq418 89.7 7e-13 >seq418 Length=2515040 Score = 89.7 bits (98), Expect = 7e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 |||||||| || | ||||| || |||| ||| | || | | |||||||| ||| ||| Sbjct 419177 CCTCCCTGGTCAACATATCTTGCAGTGTCATTGAACACACGTAGCATTGGAACAATTCCA 419118 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 |||||||| ||||| ||||| || || || ||| | ||||| || ||| | || Sbjct 419117 TTGGATGTTCCATTCGTCCCACGAATGTAACTCCCAGTAGCACGGATGTTATGCACAGAG 419058 Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 | ||| ||||| || || || |||| || || |||| |||||||| || Sbjct 419057 ACACCAATTCCACCCGCTGACTTGCTAATTACAGCACACTCCTTTAGAGTATCATATATA 418998 Query 66396 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 ||||| || |||||||| ||||| | || || |||||| Sbjct 418997 CCCTCAATGCTATCATCTTTCATGCAGATAAGGAAGCAGCTA 418956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658144679567120