Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq3418 643 1e-179 seq2762 592 2e-164 seq684 300 2e-76 seq1564 260 2e-64 seq2653 244 1e-59 seq2647 235 7e-57 seq3417 196 6e-45 seq2833 167 3e-36 seq1029 105 8e-18 seq2036 89.7 6e-13 seq1576 84.2 3e-11 >seq3418 Length=161897 Score = 643 bits (712), Expect = 1e-179 Identities = 723/960 (75%), Gaps = 12/960 (1%) Strand=Plus/Minus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 ||||| | ||| | |||||||| || ||||| || || | || |||||||| || Sbjct 1559 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1500 Query 135434 ATGATTCCTACTCTTCTCGCAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCACC 135492 ||||| |||||| | | | || || |||| |||||| | || ||||| ||||| || Sbjct 1499 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTCC 1441 Query 135493 TCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAA 135552 ||| || |||||||| || || || ||||||||| |||| ||||| | |||||||| || Sbjct 1440 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACAA 1381 Query 135553 CATCATCTCTGGTGCTGTTATCCC---TTCTAGCAACGCCATCGGCCTTCACTTCTATCC 135609 || |||||||||||| |||| || |||| ||| || || || | ||||| || || Sbjct 1380 TATTATCTCTGGTGCTATTATTCCGACTTCT-GCA--GCTATAGGTTTACACTTTTACCC 1324 Query 135610 CATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGT 135669 || |||||||| || || ||||||| ||| |||| || || ||||||||| ||||| | Sbjct 1323 AATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAAT 1264 Query 135670 GGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTA 135729 || | |||||| | | ||||| | |||||||||||| ||||||||||| || Sbjct 1263 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTT 1204 Query 135730 CCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTAC 135789 ||| ||||||||||||||||||||| ||| || |||||||| |||||||| |||||||| Sbjct 1203 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTAC 1144 Query 135790 TGCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGG 135849 || |||||| || ||||||| | || || || ||| |||||||||||| || || Sbjct 1143 CGCAGTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGG 1084 Query 135850 CATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCA 135909 || ||||| ||||| || | |||| |||| |||||||| || ||||||||||| ||||| Sbjct 1083 AATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCA 1024 Query 135910 TCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCA 135969 || || || ||||| || || ||||| || ||||| || || || ||| ||||||||| Sbjct 1023 CCCATTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 964 Query 135970 TGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTA 136029 ||| || | || || |||||| | | | || || || || ||||| ||| | Sbjct 963 TGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGA 904 Query 136030 TGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTT 136089 ||||||| ||||||||||| ||||| ||||| || || || |||||||||||||| || Sbjct 903 AGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTT 844 Query 136090 CGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCT 136149 || || |||||||||||||||| |||||||||||||||||| ||||||| ||| | Sbjct 843 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTT 784 Query 136150 TGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATC--TACGATGGCG 136207 |||||||||||||| || ||||||||||| |||| | | ||||| || ||||| Sbjct 783 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAG--GTATCAGCACTATGGCA 726 Query 136208 TTCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTC 136267 |||||||| || || ||||| |||||||| ||| | || | | |||| |||||| | Sbjct 725 TTCAACCTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATT 666 Query 136268 AACACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 || || ||||| ||| | | || |||||| || |||||||| || ||||| || ||| Sbjct 665 AATACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGT 606 Score = 609 bits (674), Expect = 3e-169 Identities = 743/1009 (74%), Gaps = 12/1009 (1%) Strand=Plus/Plus Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934 ||||||||||| | | || || || || ||||| || ||||| || ||| | || | Sbjct 34471 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCT 34530 Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994 |||| ||| ||||| || | || || ||| | || || ||||| ||||| || | Sbjct 34531 TTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCAT 34590 Query 137995 GGTACACCCACGGGTTGGCGTCTAGTT---ATCTTGAAGGCGCTAATTTCCTCACAGCAG 138051 |||| ||||| || ||||| ||||| || | ||||| |||||| | || || | Sbjct 34591 GGTATACCCATGGATTGGC---TAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCG 34647 Query 138052 CTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGT 138111 | ||||||||||||||| || | | | |||||| | | |||| ||||||||||| Sbjct 34648 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAG 34707 Query 138112 CTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCC 138171 | ||||||||| | || |||| ||| | ||||| || ||||||||||| || |||| Sbjct 34708 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCC 34767 Query 138172 ACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTA 138230 |||| || || | || || || |||||| | || || || ||| | |||| |||| | Sbjct 34768 ACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTT- 34826 Query 138231 GGCA--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCG 138288 || | || || || || || ||||||||||||||||| || ||||| || || | Sbjct 34827 --CAATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTG 34884 Query 138289 TGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGG 138348 | ||| |||| ||||| | ||||| || ||||||||||||| || |||||||| | Sbjct 34885 TATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAG 34944 Query 138349 CAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCT 138408 |||| || || |||||| | | || |||| || || ||||| ||||| | ||||| | Sbjct 34945 CAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCAT 35004 Query 138409 TTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTG 138468 ||||||||||||| || || ||| | | || | ||| |||| || ||||||||||||| Sbjct 35005 TTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTG 35064 Query 138469 CTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTG 138528 |||| |||||||||||||| | |||||| || || ||||||| || || ||| Sbjct 35065 CTACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTA 35124 Query 138529 AACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAA 138588 | || |||||| |||||||| ||||||||||||||||||||||| | ||||| |||| Sbjct 35125 ACCCAACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAA 35184 Query 138589 TCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCG 138648 ||||||| |||||||| ||||| |||||| | || ||||||||| | ||||| || | Sbjct 35185 TCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAG 35244 Query 138649 TCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGT 138708 | | ||| | |||| ||| | |||| | | ||||| || || |||||||| || | Sbjct 35245 TAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCT 35304 Query 138709 ATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACA 138768 |||| ||||| || ||||||||||| ||||| |||||||||||||| || || ||||||| Sbjct 35305 ATGACTTCGTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACA 35364 Query 138769 CCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTC 138828 |||| || ||||| | || |||||| | ||||| |||||||| || ||||| |||| Sbjct 35365 CCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTC 35424 Query 138829 ACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 | |||||| || | || ||||| || || | ||| | || |||||||| Sbjct 35425 ATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 35473 Score = 87.8 bits (96), Expect = 2e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 119469 GTCGCCAAGTGGTAAGGCAGCGGGTTTTGGTCCCGCCATTCGTGGGTTCGAATCCT 119524 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 7100 GTCGCCAAGTGGTAAGGCAACGGGTTTTGGTCCCGCCATTCGGAGGTTCGAATCCT 7045 >seq2762 Length=458829 Score = 592 bits (656), Expect = 2e-164 Identities = 740/1009 (73%), Gaps = 13/1009 (1%) Strand=Plus/Minus Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934 ||||||||||| | | || || || || ||||| || ||||| || ||| | || | Sbjct 61305 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCT 61246 Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994 |||| ||| ||||| || | || || ||| | || || ||||| ||||| || | Sbjct 61245 TTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCAT 61186 Query 137995 GGTACACCCACGGGTTGGCGTCTAGTT---ATCTTGAAGGCGCTAATTTCCTCACAGCAG 138051 |||| ||||| || ||||| ||||| || | ||||| |||||| | || || | Sbjct 61185 GGTATACCCATGGATTGGC---TAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCG 61129 Query 138052 CTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGT 138111 | ||||||||||||||| || | | | |||||| | | |||| ||||||||||| Sbjct 61128 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAG 61069 Query 138112 CTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCC 138171 | ||||||||| | || |||| ||| | ||||| || ||||||||||| || |||| Sbjct 61068 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCC 61009 Query 138172 ACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTA 138230 |||| || || | || || || |||||| | || || || ||| | |||| |||| | Sbjct 61008 ACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTT- 60950 Query 138231 GGCA--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCG 138288 || | || | || || || ||||||||||||||||| || ||||| || || | Sbjct 60949 --CAATTGCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTG 60892 Query 138289 TGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGG 138348 | ||| |||| ||||| | ||||| || ||||||||||||| || |||||||| | Sbjct 60891 TATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAG 60832 Query 138349 CAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCT 138408 |||| || || |||||| | | || |||| || || ||||| ||||| | ||| | | Sbjct 60831 CAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCAT 60772 Query 138409 TTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTG 138468 ||||||||||||| || || ||| | | || | ||| |||| || ||||||||||||| Sbjct 60771 TTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTG 60712 Query 138469 CTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTG 138528 |||| |||||||||||||| | |||||| || || ||||||| || || ||| Sbjct 60711 CTACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTA 60652 Query 138529 AACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAA 138588 | || |||||| |||||||| ||||||||||||||||||||||| | ||||| |||| Sbjct 60651 ACCCAACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAA 60592 Query 138589 TCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCG 138648 ||||||| |||||||| ||||| |||||| | || ||||||||| | ||||| || | Sbjct 60591 TCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAG 60532 Query 138649 TCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGT 138708 | | ||| | |||| ||| | |||| | | ||||| || || |||||||| || | Sbjct 60531 TAACCGGTTTATGGATGAGTGTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCT 60472 Query 138709 ATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACA 138768 |||| ||||| || ||||||| ||| ||||| |||||||||||||| || || ||||||| Sbjct 60471 ATGACTTCGTTTCTCAAGAAA-TCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACA 60413 Query 138769 CCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTC 138828 |||| || ||||| | || |||||| | ||||| |||||||| || ||||| |||| Sbjct 60412 CCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTC 60353 Query 138829 ACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 | |||||| || | || ||||| || || | ||| | || |||||||| Sbjct 60352 ATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 60304 >seq684 Length=2855409 Score = 300 bits (332), Expect = 2e-76 Identities = 378/515 (73%), Gaps = 12/515 (2%) Strand=Plus/Plus Query 137994 TGGTACACCCACGGGTTGGCGTCTAGTT---ATCTTGAAGGCGCTAATTTCCTCACAGCA 138050 ||||| ||||| || ||||| ||||| || | ||||| |||||| | || || Sbjct 2853896 TGGTATACCCATGGATTGGC---TAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCC 2853952 Query 138051 GCTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAG 138110 || ||||||||||||||| || | | | |||||| | | |||| ||||||||||| Sbjct 2853953 GCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAA 2854012 Query 138111 TCTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTC 138170 | ||||||||| | || |||| ||| | ||||| || ||||||||||| || ||| Sbjct 2854013 GCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTC 2854072 Query 138171 CACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGT 138229 ||||| || || | || || || |||||| | || || || ||| | |||| |||| | Sbjct 2854073 CACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTT 2854132 Query 138230 AGGCA--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGC 138287 || | || || || || || ||||||||||||||||| || ||||| || || Sbjct 2854133 ---CAATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCT 2854189 Query 138288 GTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTG 138347 || ||| |||| ||||| | ||||| || ||||||||||||| || |||||||| Sbjct 2854190 GTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTA 2854249 Query 138348 GCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCC 138407 ||||| || || |||||| | | || |||| || || ||||| ||||| | ||||| Sbjct 2854250 GCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCA 2854309 Query 138408 TTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGT 138467 |||||||||||||| || || ||| | | || | ||| |||| || |||||||||||| Sbjct 2854310 TTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGT 2854369 Query 138468 GCTACAGTAGAAAATACTTTGTATGAAGATGGCGA 138502 ||||| |||||||||||||| | |||||| || || Sbjct 2854370 GCTACCGTAGAAAATACTTTATTTGAAGACGGTGA 2854404 >seq1564 Length=1404973 Score = 260 bits (288), Expect = 2e-64 Identities = 292/385 (76%), Gaps = 8/385 (2%) Strand=Plus/Minus Query 135416 GGTTGGTTTGGAACGCTGATGATTCCTACTCTTCTCGCAGCTGCTATCTGC-TTTATTGT 135474 || |||||||| ||||||| |||||| | | | || || |||| |||||| | Sbjct 141179 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 141121 Query 135475 TGCTTTCATCGCTGCACCTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTC 135534 || ||||| ||||| ||||| || |||||||| || || || ||||||||| |||| || Sbjct 141120 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 141061 Query 135535 TCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTATCCC---TTCTAGCAACGCCAT 135591 |||| | ||||| || || || |||||||||||| |||| || |||| ||| || || Sbjct 141060 TCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCT-GCA--GCTAT 141004 Query 135592 CGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGG 135651 | | ||||| || || || |||||||| || || ||||||| ||| |||| || || Sbjct 141003 AAGTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGG 140944 Query 135652 TGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCG 135711 ||||||||| ||||| | || | |||||| | | ||||| | |||||||||||| Sbjct 140943 CGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCG 140884 Query 135712 CGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGC 135771 ||||||||||| || ||| ||||||||||||||||||||| ||| || |||||||| Sbjct 140883 TGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGC 140824 Query 135772 CCCTGTTGCCGCTGCTACTGCTGTT 135796 |||||||| |||||||| || ||| Sbjct 140823 TCCTGTTGCAGCTGCTACCGCAGTT 140799 >seq2653 Length=4899193 Score = 244 bits (270), Expect = 1e-59 Identities = 292/396 (74%), Gaps = 9/396 (2%) Strand=Plus/Plus Query 135743 CGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTG 135802 ||| |||||||| ||| || |||||||| |||||||| |||||||| || |||||| || Sbjct 3225428 CGCTCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTG 3225487 Query 135803 GTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACT 135862 ||||||| | || || || ||| |||||||||||| || || || ||||| ||| Sbjct 3225488 ATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACT 3225547 Query 135863 TTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCA--------TGCATCCTT 135914 || || | |||| |||| |||||||| | ||||||||||| | |||| || | Sbjct 3225548 TTCAATT-CATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCAT 3225606 Query 135915 TCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGAT 135974 | || ||||| || || ||||| || ||||| || || || ||| |||||||||||| | Sbjct 3225607 TTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 3225666 Query 135975 CTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTT 136034 | | || || |||||| | | || || || || |||| ||| | |||| Sbjct 3225667 CCTTGGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTT 3225726 Query 136035 ACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTC 136094 ||| ||||||||||| ||||| ||||| || || || |||||||||||||| || || | Sbjct 3225727 ACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCC 3225786 Query 136095 GTCTGATCTTCCAATATGCGTCGTTCAACAACTCTC 136130 | ||||||| |||||||| ||||||||||||| Sbjct 3225787 GATTGATCTTTCAATATGCTAGTTTCAACAACTCTC 3225822 >seq2647 Length=4788780 Score = 235 bits (260), Expect = 7e-57 Identities = 290/394 (74%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 135792 CTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCA 135851 |||||||| | ||||||| | || || || ||| |||||||||||| || || | Sbjct 734482 CTGTTTTCTTA-TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 734424 Query 135852 TTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATC 135911 | ||| | ||||| || | |||| |||| ||||||| || ||||||||||| ||||| | Sbjct 734423 TCTCTAGTACTTTCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACC 734364 Query 135912 CTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATG 135971 | ||||| ||| | || || ||| | || ||||| || || || ||| || |||||||| Sbjct 734363 CATTCCATATGATAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATG 734304 Query 135972 GATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATG 136031 | || | || | |||||| | | | || || | | ||||| ||| | | Sbjct 734303 GTTCCTTGGTAATTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAG 734244 Query 136032 GTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCG 136091 ||||||| ||||||||||| ||||| |||| || || || | || ||||||||| || | Sbjct 734243 GTTACAAATTCGGTCAAGAGGAAGA-CCTTATAATATCGTAGTTGTTCATGGTTATTTTG 734185 Query 136092 GTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTG 136151 | || |||||||| ||||||| |||||||||||||||||| ||||||| ||| | | Sbjct 734184 GCCGATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 734125 Query 136152 CTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGC 136185 ||||||||| ||| | ||||||||||| |||| Sbjct 734124 CTGCTTGGCTTGTAGCAGGTATCTGGTTCACTGC 734091 >seq3417 Length=265768 Score = 196 bits (216), Expect = 6e-45 Identities = 218/289 (75%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 136041 TCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGA 136100 |||||||||| ||| | ||||| || || || ||||||||| ||| || || || ||| Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 136101 TCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGC 136160 ||||||||||||| |||||||||||||||||| ||||||| ||| | |||||||||| Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 136161 CTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATC--TACGATGGCGTTCAACCTCAA 136218 |||| || ||||||||||| |||| | | ||||| || ||||| |||||||| || Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAG--GTATCAGCACTATGGCATTCAACCTAAA 156033 Query 136219 TGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGC 136278 ||| | || |||||||| ||| | || | |||| || ||| | || || ||||| Sbjct 156032 TGGTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGC 155973 Query 136279 AGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 ||| | | || |||||| || |||||||| || ||||| || ||| Sbjct 155972 TGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGT 155924 >seq2833 Length=2661255 Score = 167 bits (184), Expect = 3e-36 Identities = 191/253 (75%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 138252 ATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGTTCCTGATGTATCCTTTGGGT 138311 ||||||||||||||| | || ||||| || || || ||| |||| ||||| | ||| Sbjct 1209220 ATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCGCTAGGT 1209279 Query 138312 CAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAGCAATCTTCCGATTCCTGTTG 138371 || || ||||||||||||| | |||||||| ||||| || || |||||| | | Sbjct 1209280 CAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTT 1209339 Query 138372 TTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCTTTCATATGATGGGCGTAG-CAG- 138429 || |||| || || ||||| ||||| | ||||| |||||||||||||| || | ||| Sbjct 1209340 TTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGTCAGT 1209399 Query 138430 GTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTACAGTAGAAAATACTTTGT 138489 |||| | || | ||| || | || ||||||||||||||||| ||| |||||||||| | Sbjct 1209400 GTAT--TGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAATACTTTAT 1209457 Query 138490 ATGAAGATGGCGA 138502 |||||| || || Sbjct 1209458 TTGAAGACGGTGA 1209470 >seq1029 Length=16155 Score = 105 bits (116), Expect = 8e-18 Identities = 291/437 (67%), Gaps = 8/437 (2%) Strand=Plus/Minus Query 138038 TTTCCTCACAGCAGCTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 138097 |||| || | || || |||||| |||||||| | | | | | |||| | | | || Sbjct 12002 TTTCTTCCCTGCCGCCGTTTCGCCTCCTGCTCCTCGTTTCGCCCCTTCTTTGTTGTTCCT 11943 Query 138098 TTGGGGTCCTGAGTCTCAAGGAGATATCGTCCGCTGGT-TCCAACTT-GGGGGACTCTGG 138155 |||||||||| | | || | | | || |||| ||| ||| ||||| || ||| Sbjct 11942 CTGGGGTCCTGCCGCCCCCGGCGCTTTTCCTCGTTGGTGTCC--CTTCGGGGGTCTGTGG 11885 Query 138156 ACTTTTGTGGCGCTCCACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAG 138215 ||||||| || |||| ||| || || | || | || ||| || | || | || | | Sbjct 11884 CCTTTTGTTGCTCTCCCCGGCGCTTTCGGCCTCCTCGGTTTCCTGTTCCGTCCCTTCGCG 11825 Query 138216 ATCTCTCG-TCTGGTAGGCATCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGC 138274 | |||| |||| | | | || || | || |||| |||||||||||| | || Sbjct 11824 CTTGCTCGCTCTGTTCC-CTTGCGGCCTTCTCCTGCCCTCGCCTTCTCTGGTCCCCTTGC 11766 Query 138275 TGTGTTCGTCAGCGTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCC 138334 ||| || || || ||| || | | ||| | |||| || ||||||||||||| || Sbjct 11765 TGTTTTTGTTTCTGTCTTCTTGCTTTCTCCGCTCGGTCCGTCTGGTTGGTTCTTTGCGCC 11706 Query 138335 CTCCTTTGGTGTGGCAGCAATCTTCCGATTCCTGTTGTTCCTT-CAGGGTTTCCATAACT 138393 |||||||| || || |||| || ||||| | || || | |||||||| | | Sbjct 11705 TCGTTTTGGTGTCGCCGCTCTCTTTCGCTTCCTCCTCTTTTTTCCCGGGTTTCC-TCCTT 11647 Query 138394 GGACCCTCAACCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCT 138453 || || | |||||||| | || ||||||| || ||| | | || | ||| |||||| Sbjct 11646 GGCCCTTGCCCCCCTTTCCTCTGCTGGGCGTTGCCGGTGTCTTGGGCGCTGCCTTGCTCT 11587 Query 138454 GTGCTATTCATGGTGCT 138470 | ||| ||| ||||||| Sbjct 11586 GCGCTCTTCCTGGTGCT 11570 >seq2036 Length=7432206 Score = 89.7 bits (98), Expect = 6e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 135859 AACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCA 135918 |||||| || | |||| |||| |||||||| | ||||||||||| | ||| || || || Sbjct 2690560 AACTTTCAATTTCATGATTGTATTCCAGGCCAAGCACAACATTCTTACGCACCCATTTCA 2690501 Query 135919 CATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATC 135975 ||| | || || ||||| || |||| ||| |||| ||| |||||||||||| || Sbjct 2690500 TATGCTAGGTGTAGCTGGTGTATTCGATGGCCCTCTATTCAGTGCTATGCATGGTTC 2690444 >seq1576 Length=5940209 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 119466 GAGGTCGCCAAGTGGTAAGGCAGCGGGTTTTGGTCCCGCCATTCGTGGGTTCGAATCCT 119524 || ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| Sbjct 2964462 GACGTCGCCAAGTGGTAAGGCAACGGGTTTTGGTTCCGCCATTCGGAGGTTCGAATCCT 2964520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627941170067200