Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq3418 583 1e-161 seq2762 394 1e-104 seq3417 217 2e-51 seq2653 215 6e-51 seq2647 212 7e-50 seq684 212 7e-50 seq1564 194 2e-44 seq2833 100 3e-16 >seq3418 Length=161897 Score = 583 bits (646), Expect = 1e-161 Identities = 719/983 (73%), Gaps = 0/983 (0%) Strand=Plus/Minus Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725 || ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| || Sbjct 1559 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1500 Query 170726 ATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCT 170785 |||||||| | | | || || || || || ||| |||| ||||| ||||||||| Sbjct 1499 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATAGCCTTCATTGCTGCTCCT 1440 Query 170786 CCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 170845 ||||| ||||| || || || | ||||| ||| | || ||| | | || || ||||| Sbjct 1439 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACAAT 1380 Query 170846 ATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATC 170905 || |||||||||||| | |||| |||| || ||||| |||||||| || || || Sbjct 1379 ATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAGGTTTACACTTTTACCCAATT 1320 Query 170906 TGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATT 170965 |||||||| || | | || || ||||| |||||||| |||||||| | || || || Sbjct 1319 TGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 1260 Query 170966 TTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGA 171025 | |||||| | |||| | || ||||||||| | |||||||||| | | | Sbjct 1259 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1200 Query 171026 CTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCA 171085 || || ||| | |||||||| ||| ||||||||||| ||||| | || || ||| Sbjct 1199 CTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCA 1140 Query 171086 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 171145 || ||| | | || ||| |||||||||| || |||||||||||||| ||||| ||| Sbjct 1139 GTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 1080 Query 171146 TCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCC 171205 || ||||| ||||| |||||| | || ||||| || || |||||||| || |||||||| Sbjct 1079 TCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 1020 Query 171206 TTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGT 171265 || |||||| ||| ||||| ||| | ||||| || || |||||||| ||||| ||| Sbjct 1019 TTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 960 Query 171266 TCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGC 171325 || | || || ||| | | ||||| || || || || || || | ||| | || Sbjct 959 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGT 900 Query 171326 TATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGT 171385 || | ||||| ||||| |||||||| ||||| || || ||||||||||| || || || Sbjct 899 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGC 840 Query 171386 AGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCT 171445 |||| |||||||| ||||| ||||||||||||||||| |||||||||||| | ||| Sbjct 839 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCT 780 Query 171446 GTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 171505 | | |||||||| || | ||||| || || | |||||| | || |||||||||||| Sbjct 779 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAAC 720 Query 171506 CTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACA 171565 || ||||| ||||| ||||||||||| || || ||| | || | | || Sbjct 719 CTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATACT 660 Query 171566 TGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCA 171625 |||| ||| | ||||| | || |||||||| |||||||||||||||||| | ||||| Sbjct 659 TGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 600 Query 171626 CACAACTTCCCACTAGACCTAGC 171648 || |||||||| ||||||||||| Sbjct 599 CATAACTTCCCTCTAGACCTAGC 577 Score = 410 bits (454), Expect = 1e-109 Identities = 714/1034 (69%), Gaps = 37/1034 (4%) Strand=Plus/Plus Query 171807 GATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGTCTTTTACTTTTA 171866 ||||| |||||| ||| || |||||||| || | || ||||| ||||| || || || Sbjct 34473 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 34532 Query 171867 CCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTCGTGACCTCATGG 171926 |||||||| || | || | |||||||||||| || || || || || || |||||| Sbjct 34533 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 34592 Query 171927 TACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTAACTGCAGCAGTA 171986 || || ||||| | || || ||| | || || || || |||||||| ||||| Sbjct 34593 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAGTT 34652 Query 171987 TCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGACCTGAGGCACAA 172046 || || |||| | || | | | ||| | | ||||| |||||||| ||||| |||||| Sbjct 34653 TCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34712 Query 172047 GGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTAGCATTACATGGA 172106 |||||| || || |||| ||||||||| || || |||| ||||| || | || || Sbjct 34713 GGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGC 34772 Query 172107 GTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGATA 172166 | || ||||| |||||||||||| | | || || ||| |||| || |||| | Sbjct 34773 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTG 34832 Query 172167 CGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACGAGCATCT---TT 172223 || ||||| || || | |||||||| | ||||| || || | ||| || Sbjct 34833 CGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTT----TGTTTCTGTATT 34888 Query 172224 C-TAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCAGC 172282 | | || ||||| |||||||| | |||||||||| || ||| |||||||| ||||| Sbjct 34889 CTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGC 34948 Query 172283 AATCTTTCGTTATAT----TTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCAT 172338 || ||||| | || ||| |||| ||||||| || ||| || | || |||| Sbjct 34949 TATATTTCGATTCATCCTCTTTTTTCA---AGGGTTT-CATAATTGGACATTGAACCCAT 35004 Query 172339 TTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTG 172398 ||||||||||||| || || ||| || | || | || || ||||| || || ||||||| Sbjct 35005 TTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTG 35064 Query 172399 CAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAAT 172458 | || ||| | || || || | ||||| || ||| || | ||| Sbjct 35065 CTACCGTAGAAAATACTTTATTTGAAG------------ACGGTGATGG-----TGCAA- 35106 Query 172459 CTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACTG 172518 |||| ||| | || || | || || || |||||||||||| ||| |||||| Sbjct 35107 ATACA---TTCCGCGCTTTTAACCCAACTCAATCTGAAGAAACTTATTCAATGGTTACTG 35163 Query 172519 CTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACT 172578 ||||| | || ||||| || || ||||| | || ||||| || ||| | | ||||| | Sbjct 35164 CTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATT 35223 Query 172579 TCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTC 172638 || ||||||| || ||||| || | ||| | |||| || | || | || |||| Sbjct 35224 TCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTC 35283 Query 172639 TTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACC 172698 | || || ||||| | || || ||||| || |||||||| || | ||||| ||||| | Sbjct 35284 TGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATTCGGGCAGCGGAAGATC 35343 Query 172699 CAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGA 172758 | || |||||||| |||||||| || || ||||| | || |||||||| | || |||| Sbjct 35344 CTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGA 35403 Query 172759 TGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAG 172818 || | || ||||| || ||||| ||| || | ||||| || || || | ||||| | Sbjct 35404 TGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTG 35463 Query 172819 GCAACGCACTATAA 172832 | ||||| || ||| Sbjct 35464 GAAACGCTCTTTAA 35477 >seq2762 Length=458829 Score = 394 bits (436), Expect = 1e-104 Identities = 711/1034 (69%), Gaps = 38/1034 (4%) Strand=Plus/Minus Query 171807 GATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGTCTTTTACTTTTA 171866 ||||| |||||| ||| || |||||||| || | || ||||| ||||| || || || Sbjct 61303 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 61244 Query 171867 CCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTCGTGACCTCATGG 171926 |||||||| || | || | |||||||||||| || || || || || || |||||| Sbjct 61243 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 61184 Query 171927 TACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTAACTGCAGCAGTA 171986 || || ||||| | || || ||| | || || || || |||||||| ||||| Sbjct 61183 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAGTT 61124 Query 171987 TCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGACCTGAGGCACAA 172046 || || |||| | || | | | ||| | | ||||| |||||||| ||||| |||||| Sbjct 61123 TCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 61064 Query 172047 GGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTAGCATTACATGGA 172106 |||||| || || |||| ||||||||| || || |||| ||||| || | || || Sbjct 61063 GGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGC 61004 Query 172107 GTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGATA 172166 | || ||||| |||||||||||| | | || || ||| |||| || |||| | Sbjct 61003 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTG 60944 Query 172167 CGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACGAGCATCT---TT 172223 || | ||| || || | |||||||| | ||||| || || | ||| || Sbjct 60943 CGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTT----TGTTTCTGTATT 60888 Query 172224 C-TAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCAGC 172282 | | || ||||| |||||||| | |||||||||| || ||| |||||||| ||||| Sbjct 60887 CTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGC 60828 Query 172283 AATCTTTCGTTATAT----TTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCAT 172338 || ||||| | || ||| |||| ||||||| || ||| || | || ||| Sbjct 60827 TATATTTCGATTCATCCTCTTTTTTCA---AGGGTTT-CATAATTGGACATTGAACTCAT 60772 Query 172339 TTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTG 172398 ||||||||||||| || || ||| || | || | || || ||||| || || ||||||| Sbjct 60771 TTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTG 60712 Query 172399 CAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAAT 172458 | || ||| | || || || | ||||| || ||| || | ||| Sbjct 60711 CTACCGTAGAAAATACTTTATTTGAAG------------ACGGTGATGG-----TGCAA- 60670 Query 172459 CTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACTG 172518 |||| ||| | || || | || || || |||||||||||| ||| |||||| Sbjct 60669 ATACA---TTCCGCGCTTTTAACCCAACTCAATCTGAAGAAACTTATTCAATGGTTACTG 60613 Query 172519 CTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACT 172578 ||||| | || ||||| || || ||||| | || ||||| || ||| | | ||||| | Sbjct 60612 CTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATT 60553 Query 172579 TCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTC 172638 || ||||||| || ||||| || | ||| | |||| | | || | || |||| Sbjct 60552 TCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGTTCTTGGAGTAGTCGGTC 60493 Query 172639 TTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACC 172698 | || || ||||| | || || ||||| || |||||||| || | ||||| ||||| | Sbjct 60492 TGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAAT-CGGGCAGCGGAAGATC 60434 Query 172699 CAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGA 172758 | || |||||||| |||||||| || || ||||| | || |||||||| | || |||| Sbjct 60433 CTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGA 60374 Query 172759 TGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAG 172818 || | || ||||| || ||||| ||| || | ||||| || || || | ||||| | Sbjct 60373 TGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTG 60314 Query 172819 GCAACGCACTATAA 172832 | ||||| || ||| Sbjct 60313 GAAACGCTCTTTAA 60300 >seq3417 Length=265768 Score = 217 bits (240), Expect = 2e-51 Identities = 240/317 (76%), Gaps = 2/317 (1%) Strand=Plus/Minus Query 171333 TCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAA 171392 |||| ||||| ||| |||| ||||| || || ||||||||| || || || |||| | Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 171393 TCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCC 171452 ||||||| ||||| ||||||||||||||||| |||||||||||| | |||| | | Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 171453 CTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACG 171512 ||||||| || | ||||| || || | |||||| | || |||||||||||||| || | Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 171513 GATTCAACTTCAACCAATCAGTTGTAGAT-GCAAACGGAAAGATTGTACCAACATGGGGA 171571 | | || ||||||||||| || || ||| || || || | | || |||| Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAA-GGCCGCGTAATTAAGACTTGGGCT 155972 Query 171572 GATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAAC 171631 ||| | ||||| | || |||||||| |||||||||||||||||| | ||||| || ||| Sbjct 155971 GATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAAC 155912 Query 171632 TTCCCACTAGACCTAGC 171648 ||||| ||||||||||| Sbjct 155911 TTCCCTCTAGACCTAGC 155895 >seq2653 Length=4899193 Score = 215 bits (238), Expect = 6e-51 Identities = 283/392 (72%), Gaps = 9/392 (2%) Strand=Plus/Plus Query 171039 CTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCTTGTGT 171098 ||||||| ||| ||||||||||| ||||| | || || ||||| ||| | | | Sbjct 3225432 CTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCT 3225491 Query 171099 ATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCA 171158 | ||| |||||||||| || |||||||||||||| ||||| ||||| ||||| |||| Sbjct 3225492 ACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCA 3225551 Query 171159 ACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAA--------TGCACCCCTTCCA 171210 | |||||| | || ||||| || | |||||||| || | ||||||| || || Sbjct 3225552 A-TTCATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCA 3225610 Query 171211 TATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCT 171270 |||| ||| ||||| ||| | ||||| || || |||||||| ||||| ||||| | Sbjct 3225611 TATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTT 3225670 Query 171271 AGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAA 171330 || || ||| | | |||| || || || || || || | ||| | || || | Sbjct 3225671 GGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAG 3225730 Query 171331 GTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATT 171390 ||||| ||||| |||||||| ||||| || || ||||||||||| || || || |||| Sbjct 3225731 ATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATT 3225790 Query 171391 AATCTTCCAGTATGCATCATTCAACAACTCTC 171422 ||||| || ||||| ||||||||||||| Sbjct 3225791 GATCTTTCAATATGCTAGTTTCAACAACTCTC 3225822 >seq2647 Length=4788780 Score = 212 bits (234), Expect = 7e-50 Identities = 287/399 (72%), Gaps = 1/399 (0%) Strand=Plus/Minus Query 171089 TTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCA 171148 || ||| | || ||| |||| ||||| || |||||||||||||| ||||| ||||| Sbjct 734478 TTTCTTATCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCT 734419 Query 171149 GGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTC 171208 |||| ||||| |||||| | || ||||| | || |||||||| || |||||||| ||| Sbjct 734418 AGTACTTTCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCATTC 734359 Query 171209 CATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCT 171268 |||||| ||| ||||| || | ||||| || || ||||||| ||||| ||||| Sbjct 734358 CATATGATAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGTTCC 734299 Query 171269 CTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTAT 171328 | || | ||| | | ||||| || || | | || || | ||| | || || Sbjct 734298 TTGGTAATTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGGTTAC 734239 Query 171329 AAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGA 171388 || ||||| ||||| |||| | | ||||| || || | || |||||| || || || || Sbjct 734238 AAATTCGGTCAAGAGGAAG-ACCTTATAATATCGTAGTTGTTCATGGTTATTTTGGCCGA 734180 Query 171389 TTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTA 171448 || |||||| | ||||| ||||||||||||||||| |||||||||||| | |||| Sbjct 734179 TTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCT 734120 Query 171449 TTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATC 171487 | | ||||| || | ||||| || || | |||||| Sbjct 734119 TGGCTTGTAGCAGGTATCTGGTTCACTGCTTTAGGTATC 734081 >seq684 Length=2855409 Score = 212 bits (234), Expect = 7e-50 Identities = 364/524 (69%), Gaps = 16/524 (3%) Strand=Plus/Plus Query 171912 TTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTT 171971 || || || |||||||| || ||||| | || || ||| | || || || || Sbjct 2853884 TTTGTAACTTCATGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTC 2853943 Query 171972 TTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGG 172031 |||||||| ||||| || || |||| | || | | | ||| | | ||||| |||||| Sbjct 2853944 TTAACTGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGG 2854003 Query 172032 GGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTT 172091 || ||||| |||||||||||| || || |||| ||||||||| || || |||| ||| Sbjct 2854004 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTT 2854063 Query 172092 GTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCA 172151 || || | || || | || ||||| |||||||||||| | | || || ||| |||| Sbjct 2854064 GTTGCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCT 2854123 Query 172152 GGACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTC 172211 || |||| | || ||||| || || | |||||||| | ||||| || || Sbjct 2854124 CGATCTGTTCAATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTT- 2854182 Query 172212 ACGAGCATCT---TTC-TAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTC 172267 | ||| ||| | || ||||| |||||||| | |||||||||| || ||| Sbjct 2854183 ---TGTTTCTGTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAG 2854239 Query 172268 ATTTGGTGTCGCAGCAATCTTTCGTTATAT----TTTATTCATACAGGGTTTCCACAATA 172323 |||||||| ||||| || ||||| | || ||| |||| ||||||| || ||| Sbjct 2854240 TTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCA---AGGGTTT-CATAATT 2854295 Query 172324 TAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTAT 172383 || | || ||||||||||||||||| || || ||| || | || | || || |||| Sbjct 2854296 GGACATTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTAT 2854355 Query 172384 GTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGAC 172427 | || || |||||||| || ||| | || || || | ||||||| Sbjct 2854356 GCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGAC 2854399 >seq1564 Length=1404973 Score = 194 bits (214), Expect = 2e-44 Identities = 269/376 (72%), Gaps = 3/376 (1%) Strand=Plus/Minus Query 170703 ACGTTGGTTGGTTTGGTGTCTTAATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCA 170762 || |||| ||||||||||| || |||||||| | | | || || || || || | Sbjct 141184 ACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTA 141125 Query 170763 TTGTAGCATTCATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGG 170822 || |||| ||||| |||||||||||||| ||||| || || || | ||||| ||| | | Sbjct 141124 TTATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTG 141065 Query 170823 GTTCTTTCTTATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAA 170882 | ||| | | || || ||||| || |||||||||||| | |||| |||| || | Sbjct 141064 GATCTCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTA 141005 Query 170883 TAGGATTACACTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACG 170942 || | |||||||| || || || |||||||| || | | || || ||||| ||||||| Sbjct 141004 TAAGTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACG 140945 Query 170943 GAGGTCCTTACCAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTA 171002 | |||||||| | || || || | |||||| | |||| | || ||||||||| Sbjct 140944 GCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTC 140885 Query 171003 GACAGTGGGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAG 171062 | |||||||||| | | | || || ||| | |||||||| ||| |||||||||| Sbjct 140884 GTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAG 140825 Query 171063 CACCTGTATCTGCAGC 171078 | ||||| |||||| Sbjct 140824 CTCCTGT---TGCAGC 140812 >seq2833 Length=2661255 Score = 100 bits (110), Expect = 3e-16 Identities = 221/325 (68%), Gaps = 20/325 (6%) Strand=Plus/Plus Query 172113 GGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGATACGTCCT 172172 ||||| ||||||| |||| | | || || ||| |||| || |||| | || ||| Sbjct 1209151 GGACTAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTGCGGCCT 1209210 Query 172173 TACAACGCACTAGCATTCTCAGCAGTT--ATTGCAGTATTCACGAGCATCT---TTCTA- 172226 || || | | |||||||| | ||| ||||| || || | ||| |||| Sbjct 1209211 TATAATGTCATCGCATTCTCTG--GTTCAATTGCTGTTTTT----GTTTCTGTATTCTTG 1209264 Query 172227 ATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCAGCAATC 172286 || ||||| |||||||| | |||||||||| || | | |||||||| ||||| || Sbjct 1209265 ATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATA 1209324 Query 172287 TTTCGTTATAT----TTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTTCA 172342 ||||| | || ||| |||| |||||||| | ||| || | || |||||||| Sbjct 1209325 TTTCGATTCATCCTTTTTTTTCA---AGGGTTTC-ATAATTGGACATTGAACCCATTTCA 1209380 Query 172343 TATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCAAC 172402 ||||||||| || | || || | || | || || |||| || || |||||||| || Sbjct 1209381 TATGATGGGAGTTGTCAGTGTATTGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTAC 1209440 Query 172403 AGTACAGAACACATTGTATGAAGAC 172427 ||| | || || || | ||||||| Sbjct 1209441 CGTATAAAATACTTTATTTGAAGAC 1209465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570244435265520