Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq418 82.4 1e-10 >seq418 Length=2515040 Score = 82.4 bits (90), Expect = 1e-10 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 63113 TCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGG 63172 |||||| ||| |||||| | | || || || || ||||| || |||||||||| Sbjct 419604 TCTTTCATATTCTGTATAAAGTTTCTCAAATTCTTCACCCCAGCAATCTGCCAATCCAGG 419545 Query 63173 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63232 |||| ||||| | || ||||||| || | | || ||||| || ||||||||| Sbjct 419544 TGCCTCATTTGGACAAAATAAAGACCACTGCCCATTACTCTGCACTCTTTCCATAAAGAG 419485 Query 63233 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63280 |||||||| ||| ||||| ||| ||||||| | | |||||| || Sbjct 419484 ATCAGGAACCCAGAGAGCATAAAAGAGATCTCGTGCACGATGTTCTTC 419437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622920584580880