Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq813 86.0 5e-12 >seq813 Length=2089867 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| ||||| || || || ||||| ||||||||||| || | || ||| | Sbjct 907659 AATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATCACTCTTGAGGTTGAGAGCTC 907718 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| | | |||| || || || ||| || || || ||| ||||| || | Sbjct 907719 TGACACCATAG-ACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACC 907777 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || || |||| ||| || || ||||| ||||||| | ||| | || ||||||| Sbjct 907778 AGCAGAGGCTGATTTTTGCAGGGAAGCAATTGGAAGATGGAAGGACCCTAGCTGATTATA 907837 Query 115464 ACATTCAAAAAGAGTCTAC 115482 |||| || || |||||||| Sbjct 907838 ACATCCAGAAGGAGTCTAC 907856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425326281498160