Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq688 159 8e-34 seq268 150 4e-31 seq813 134 3e-26 seq3321 132 1e-25 seq1361 129 1e-24 seq1576 127 5e-24 seq1421 127 5e-24 seq1932 87.8 4e-12 seq1509 84.2 5e-11 >seq688 Length=8729492 Score = 159 bits (176), Expect = 8e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 4649679 CCACCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4649620 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 4649619 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 4649560 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || ||||| || || || | || |||||| || Sbjct 4649559 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCCGACGATTCAACC 4649500 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| |||||||||||||| ||||||||||| || || ||||||||| Sbjct 4649499 TCGAGGGTGATCGTCTTCCCCGTCAGAGTCTTCACAAAGATCTGCATT 4649452 >seq268 Length=6919517 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || || || || ||||| | ||| |||||| |||||||| || ||||| Sbjct 3332040 CCACCGCGCAGCCTCAGAACCAGATGCAGCGTTGATTCTTTCTGGATATTGTAATCGGCT 3332099 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||||| || ||||| |||| | ||| ||| ||| Sbjct 3332100 AGGGTTCGGCCATCCTCGAGCTGTTTACCCGCGAAAATCAACCTCTGCTGATCGGGAGGG 3332159 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||||||||||||||| || ||||| |||||||| || || | ||| ||| ||| Sbjct 3332160 ATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTCTCAATTGTATCCGAGCT---TTCA 3332216 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| || ||||| |||||||| || ||||| || ||||| Sbjct 3332217 ACTTCTAGGGTGATAGTTTTCCCAGTCAGAGTTTTCACGAAGATTTGCAT 3332266 Score = 122 bits (134), Expect = 2e-22 Identities = 175/244 (72%), Gaps = 12/244 (5%) Strand=Plus/Plus Query 288236 TTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATAT 288295 |||| | || |||||||| || | || || ||||| | ||| ||| || ||||| | Sbjct 3331801 TTCAGATATCACCACCGCGAAGACGGAGAACAAGATGGAGAGTGGATTCCTTCTGGATGT 3331860 Query 288296 TATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTT 288355 | || ||||| || ||||| || || || | ||||| || ||||| |||| ||||| | Sbjct 3331861 TGTAATCGGCTAGGGTGCGCCCATCCTCGAGCTGTTTCCCGGCGAAAATCAAGCGCTGCT 3331920 Query 288356 GAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAAT 288412 | ||||| || ||||| || || ||||||||||| || || || || || | || Sbjct 3331921 GG---TCTGGAGGAATGCCTTCCTTGTCTTGGATTTTCGCCTTGACATTATCAATTGTAT 3331977 Query 288413 C---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 | |||| || || || || ||||| |||||||| || | ||||| |||||||||| Sbjct 3331978 CGGAGCTC---TCCACCTCCAGAGTGATTGTCTTCCCAGTTAATGTCTTCACGAATATCT 3332034 Query 288470 GCAT 288473 |||| Sbjct 3332035 GCAT 3332038 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | || || || || || || || || || Sbjct 3332724 CCTCCGCGCAGACGGAGCACGAGGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCCGCT 3332783 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | ||||| || |||||||| |||||||| || | || Sbjct 3332784 AGGGTTCTGCCGTCGTCGAGCTGTTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGA 3332843 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 |||||||| |||||||| || ||||| || ||||| || || | |||| ||| || Sbjct 3332844 ATTCCTTCCTTATCCTGAATCTTCGCCTTGACGTTGTCGATGGTATCGGAGCTC---TCG 3332900 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| ||||| || || || || || || ||||| Sbjct 3332901 ACCTCGAGAGTGATCGTCTTACCGGTAAGGGTTTTCACAAAGATTTGCAT 3332950 >seq813 Length=2089867 Score = 134 bits (148), Expect = 3e-26 Identities = 162/218 (74%), Gaps = 12/218 (6%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| || || ||||| || ||||||||||| || || ||||| Sbjct 907415 AGCACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCC 907356 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | |||||||| ||||||||||| | ||| || || ||| |||||||| || Sbjct 907355 TCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGG---TCCGGGGGAATTCCTTCCTTG 907299 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTG 288435 || ||||| || || || ||||| || || | ||| ||| || || ||||| ||| Sbjct 907298 TCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGAGCTC---TCCACCTCGAGGGTG 907242 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| || ||||||||||| |||||||| Sbjct 907241 ATGGTCTTTCCGGTTAGGGTCTTGACGAAGATCTGCAT 907204 Score = 131 bits (144), Expect = 4e-25 Identities = 171/234 (73%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| || || || | |||| || || || ||||| || || || || Sbjct 907659 TCCACCGCGGAGCCTGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 907600 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || || | |||||||| |||||||| || | ||| ||| ||||| Sbjct 907599 AAGAGTGCGGCCATCCTCCAGCTGTTTTCCGGCGAAGATAAGCCTCTGCTGA---TCTGG 907543 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | |||||||| || |||||||| || || || ||||| || || | || ||| Sbjct 907542 GGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCAATGGTGTCTGAGCT--- 907486 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||| ||||| |||||||| ||||||||||| || ||||| Sbjct 907485 TTCAACCTCCAGTGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 907432 Score = 123 bits (136), Expect = 6e-23 Identities = 147/197 (75%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| || || ||||| || | |||||||| |||||| Sbjct 907166 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGCCCGTCCTCGAGCTGTTTTCCGGCGAAG 907107 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || || ||| |||||||| || || ||||| || || || ||| Sbjct 907106 ATCAGTCTCTGCTG---GTCCGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACG 907050 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || ||||| ||||| ||||| ||||| || || Sbjct 907049 TTATCGATGGTGTCAGAGCTC---TCCACCTCGAGGGTGATAGTCTTTCCGGTTAGGGTT 906993 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 906992 TTGACGAAGATCTGCAT 906976 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||| || || || || || | ||||| | | |||||||| ||||| Sbjct 699118 TTCCTTCTGGATATTGTAATCAGCAAGGGTACAGCCGTCCTTGAGCTGTTTTCCGGCGAA 699177 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| | ||| || ||||||||||| || ||||| || || || || || || Sbjct 699178 GATCAGCCTCTGCTGGTCCCGGGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATT 699237 Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | || |||| || || || || |||||||||||||| ||||||||||| Sbjct 699238 ATCAATGGTGTCGGAGCTC---TCGACCTCAAGAGTGATCGTCTTCCCCGTCAGAGTCTT 699294 Query 288459 GACGAATATCTGCA 288472 ||||| ||||||| Sbjct 699295 CACGAAGATCTGCA 699308 >seq3321 Length=7168875 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | ||| ||||| || | || || |||||||| || ||||| || Sbjct 34909 CCGCCGCGGAGGCGAAGGACGAGGTGGAGGGTAGAATCCTTTTGGATGTTGTAGTCTGCA 34850 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | | ||||| |||||||| || || || || |||| Sbjct 34849 AGGGTGCGCCCGTCCTCGAGCTACTTTCCGGCGAAGATGAGGCGTTGCTGGTCTGGTGGG 34790 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||||||||| ||||| || || || | || || || || Sbjct 34789 ATGCCCTCCTTGTCCTGGATTTTCGCCTTCACATTGTCAATGGTGTCCGATGACTCGACC 34730 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||||||||| ||||| ||||| || || ||||||||| Sbjct 34729 TCTAGGGTTATCGTCTTCCCCGTCAGGGTCTTCACAAAGATCTGCATT 34682 >seq1361 Length=2134540 Score = 129 bits (142), Expect = 1e-24 Identities = 170/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || ||||||||||||||||| || Sbjct 1709516 CCACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCA 1709457 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || ||||| | || |||||||| || ||||| |||||||| |||| Sbjct 1709456 AGTGTACGGCCATCTTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTG---ATCTGGA 1709400 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || |||||||| ||||| |||||||| || || || || || || | |||| ||| Sbjct 1709399 GGAATTCCTTCCTTATCTTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTC--- 1709343 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || || |||||||| || || |||||||| Sbjct 1709342 TCAACCTCAAGAGTAATAGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 1709290 Score = 122 bits (134), Expect = 2e-22 Identities = 172/238 (72%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || ||||| | ||| ||||||||||| || |||| Sbjct 1710432 CATG-CCACCACGCAGGCGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATGTTGTAGT 1710374 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || ||||| | || ||||| || || ||||| | |||||| || Sbjct 1710373 CTGCAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCAAAAATCAGCCTCTGTTG---AT 1710317 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| || ||||| ||||| || || || || ||||| || || || | ||| || Sbjct 1710316 CTGGGGGAATCCCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATGGTATCCGAGC 1710257 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||| ||||| || || ||||| || || || |||||||| Sbjct 1710256 TC---TCAACTTCAAGAGTGATGGTCTTGCCAGTAAGAGTTTTCACAAAGATCTGCAT 1710202 Score = 111 bits (122), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || ||||| | ||| ||||||||||| || |||| Sbjct 1710204 CATG-CCACCACGCAGACGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATGTTGTAGT 1710146 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || ||||| | || ||||| || || || || | |||||| | Sbjct 1710145 CTGCAAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAATATAAGCCTCTGTTGGTCAG 1710086 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 || |||||||||||||| || || || || || || || || || | ||| |||| Sbjct 1710085 GAGGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTC- 1710027 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || ||||| || || || |||||||| Sbjct 1710026 --TCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCAT 1709974 Score = 105 bits (116), Expect = 2e-17 Identities = 166/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || ||||| | ||| ||||||||||| || || | Sbjct 1710660 CATG-CCACCACGAAGGCGGAGGACAAGATGTAGGGTGGACTCTTTTTGGATGTTGTAAT 1710602 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || ||||| | || ||||| || || ||||| | ||||| || Sbjct 1710601 CAGCAAGTGTACGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAGCCTTTGTTG---AT 1710545 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || || || ||||| || || ||||| || || ||||| || || || | ||| Sbjct 1710544 CTGGAGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCTGAAC 1710485 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||| |||||||| || || || ||||| || |||||||| Sbjct 1710484 TTTCAACCTCCAGGGTGATGGTCTTCCCAGTAAGTGTTTTGACAAAGATCTGCAT 1710430 >seq1576 Length=5940209 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || | ||||| || || || || || || || ||||| Sbjct 2986008 CCACCCCTCAGCCTCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCC 2986067 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | || ||||| |||||||| || | ||| ||| |||||| Sbjct 2986068 AGGGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGA---TCTGGG 2986124 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||||| ||||||||||| || || ||||| || || | ||| ||| Sbjct 2986125 GGGATTCCTTCTTTGTCCTGGATTTTTGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCC 2986184 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || |||||||| || |||||||| Sbjct 2986185 ACCTCGAGAGTGATTGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 2986234 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || ||||| || ||||| || || || | || ||||| || ||| Sbjct 2985816 TCCTTCTGGATGTTGTAATCGGCCAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAG 2985875 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| ||| |||||| ||||||||||| ||||||||||| || || || Sbjct 2985876 ATAAGCCTCTGCTGA---TCTGGGGGGATTCCTTCTTTGTCCTGGATTTTTGCCTTGACA 2985932 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| ||| ||| || || || ||||| ||||| ||||| || |||||| Sbjct 2985933 TTGTCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTG 2985992 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 2985993 ACAAAGATCTGCAT 2986006 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || ||||| | || || || |||||||| || |||||| Sbjct 2986692 CCACCCCTGAGACGGAGCACCAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCGGCG 2986751 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| | || || |||||| Sbjct 2986752 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCTTTGCTG---GTCTGGG 2986808 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 |||||||| || |||||||| || || || ||||| || || | ||| ||| Sbjct 2986809 GGAATTCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCGATGGTGTCGGAACTC--- 2986865 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| ||||| || || || || || |||||||| Sbjct 2986866 TCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 2986918 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || || |||||||| || || || || || | |||||||| ||||| Sbjct 2986271 TTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCCATCCTCGAGCTGTTTTCCGGCGAA 2986330 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| | ||| || |||||| || || || |||||||| || || || ||||| Sbjct 2986331 GATCAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 2986390 Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | || |||| || ||||| || ||||| ||||| || || || || || Sbjct 2986391 GTCAATGGTGTCGGAGCTC---TCAACTTCCAGGGTGATTGTCTTACCCGTGAGGGTTTT 2986447 Query 288459 GACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 2986448 CACGAAGATCTGCAT 2986462 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || ||||| || || || ||||| || | || ||||| |||||| Sbjct 2986500 TCCTTCTGGATGTTGTAATCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 2986559 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || || ||| ||||| || || |||||||| || || || ||||| Sbjct 2986560 ATCAGCCTTTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 2986619 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || ||||| || || ||||| ||||| || || || Sbjct 2986620 TCGATGGTGTCGGAACTC---TCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTC 2986676 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 2986677 ACGAAGATCTGCAT 2986690 >seq1421 Length=9127415 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| || || |||||||| |||||||| || || || ||||| Sbjct 1342965 AGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGCTAGGGTACGGCCGTCC 1343024 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || ||||| |||||||| || | ||| || |||||| ||||||||||| Sbjct 1343025 TCAAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGG---TCTGGGGGGATTCCTTCTTTG 1343081 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || ||||||||||| || || | ||| ||| || || | || || Sbjct 1343082 TCCTGGATCTTAGCTTTCACGTTGTCAATTGTGTCGGAGCTTTCAACCTCCAAGGTAATA 1343141 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| ||||| |||||||| Sbjct 1343142 GTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 1343176 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| || || || | |||| ||| || || ||||| || |||||||| Sbjct 1342721 TCCACCCCTGAGCCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1342780 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || || || | || || || |||||||| || | |||||| | || Sbjct 1342781 AAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGCCTCTGTTGGTCAGGAGG 1342840 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| ||||| || |||||||||||||| |||||||| || || | ||| ||| ||| Sbjct 1342841 GATGCCTTCCTTGTCCTGGATTTTCGCCTTCACGTTGTCAATCGTATCCGAGCT---TTC 1342897 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || ||||| ||||| || ||||| ||||| |||||||| Sbjct 1342898 AACCTCCAAGGTAATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 1342948 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || ||||| | || || || ||||| ||||||||||| Sbjct 1342494 CCCCCACGGAGACGGAGGACAAGATGCAGAGTAGACTCCTTCTGGATGTTATAGTCGGCC 1342553 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| | |||||||| || ||||||| | ||| ||| ||| Sbjct 1342554 AGAGTCCTTCCATCTTCCAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCCGGTGGA 1342613 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || ||||| || |||||||| || || | ||| ||| || Sbjct 1342614 ATCCCCTCCTTGTCTTGAATTTTAGCCTTCACGTTGTCAATTGTGTCGGAGCTTTCCACC 1342673 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||| || ||||| ||||| ||||| ||||||||| Sbjct 1342674 TCCAGGGTAATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATT 1342721 Score = 114 bits (126), Expect = 3e-20 Identities = 145/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| |||||||| || || || ||||| || | || ||||| |||||| Sbjct 1343442 TCCTTCTGGATATTGTAGTCGGCTAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 1343501 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | |||||| |||||| ||||| || || |||||||| || || |||||| Sbjct 1343502 ATCAGCCTCTGTTG---GTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTCACG 1343558 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || || | || || ||||| ||||| || || Sbjct 1343559 TTATCAATTGTGTCGGAGCTC---TCAACCTCCAAGGTAATAGTCTTGCCGGTTAGGGTT 1343615 Query 288457 TTGACGAATATCTGCAT 288473 || ||||| |||||||| Sbjct 1343616 TTCACGAAGATCTGCAT 1343632 Score = 100 bits (110), Expect = 7e-16 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| || || |||||||| || |||||||| || || ||||| Sbjct 1343649 AGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCC 1343708 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | ||| || || ||||||||||| | ||| || ||||| || || ||||| Sbjct 1343709 TCGAGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTATCT 1343768 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATC 288438 || || || || || ||||| || || | ||| ||| || || ||||| || || Sbjct 1343769 TGAATCTTGGCCTTGACGTTGTCGATGGTGTCGGAACTC---TCGACCTCGAGAGTAATA 1343825 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || || || || |||||||| Sbjct 1343826 GTCTTACCGGTTAGGGTTTTCACAAAGATCTGCAT 1343860 >seq1932 Length=4383442 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || || || || || || || || || | ||||||||||| || Sbjct 927794 ATACCTTCTTTGTCTTGAATCTTAGCCTTAACATTGTCGATGGTGTCGCTCGATTCAACC 927853 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| || || ||||| ||||| || ||||| ||||||||| || Sbjct 927854 TCGAGAGTGATGGTTTTTCCGGTTAGAGTTTTCACGAAAATCTGCATTTTG 927904 >seq1509 Length=3727952 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || || || || || || || ||||| | ||||||||||| || ||| Sbjct 2871246 CCTTCTTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTGTCGCTCGATTCGACCTCG 2871187 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||| || || || || ||||| |||||||| Sbjct 2871186 AGAGTTATGGTCTTCCCCGTAAGGGTTTTAACGAAGATCTGCAT 2871143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179602739247404