Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq688 140 4e-28 seq3321 120 3e-22 seq1576 118 1e-21 seq302 116 4e-21 seq1421 109 6e-19 seq1830 104 3e-17 seq268 104 3e-17 seq1361 96.9 4e-15 seq813 96.9 4e-15 seq1509 84.2 2e-11 >seq688 Length=8729492 Score = 140 bits (154), Expect = 4e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 4649644 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 4649585 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | ||| | || ||||||||| |||||| ||| | | Sbjct 4649584 GATGAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATT 4649525 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| |||||| || || | ||||| || || |||||||| || || || Sbjct 4649524 GTCGATGGTGTCCGACGATTCAACCTCGAGGGTGATCGTCTTCCCCGTCAGAGTCTTCAC 4649465 Query 46582 AAAGATTTGCATTTT 46596 |||||| |||||||| Sbjct 4649464 AAAGATCTGCATTTT 4649450 >seq3321 Length=7168875 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| | || |||||| |||| ||||||| ||| |||||||| Sbjct 34873 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGCCCGTCCTCGAGCTACTTTCCGGCGAAG 34814 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||| |||||||| | || | || |||||||||| ||| ||| ||| | | Sbjct 34813 ATGAGGCGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATTTTCGCCTTCACATTG 34754 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || || || || | || || || || |||||||| || || ||| Sbjct 34753 TCAATGGTGTCCGATGACTCGACCTCTAGGGTTATCGTCTTCCCCGTCAGGGTCTTCACA 34694 Query 46583 AAGATTTGCATTTT 46596 ||||| |||||||| Sbjct 34693 AAGATCTGCATTTT 34680 >seq1576 Length=5940209 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||| | ||||||||| | || |||||| ||||||||||| |||| Sbjct 2986692 CCACCCCTGAGACGGAGCACCAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCGGCG 2986751 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| |||| ||||||||||| |||||||| |||| | |||||||| | || Sbjct 2986752 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGA 2986811 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATTCC 46543 | | ||||||||| |||||| ||| | | | | |||||| ||| || Sbjct 2986812 ATTCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCGATGGTGTCGGAACTC---TCG 2986868 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 2986869 ACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 2986918 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || ||||| | ||||| ||| | ||| |||||| ||||| ||||| |||| Sbjct 2985780 CCACCCCTCAAACGGAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCC 2985839 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || ||||||||||| || || || || | | |||||| || | || Sbjct 2985840 AGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGGGGG 2985899 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || |||||| ||| || ||||| | | | |||||| |||||| Sbjct 2985900 ATTCCTTCTTTGTCCTGGATTTTTGCCTTGACATTGTCAATAGTGTCGGAGCTTTCCACC 2985959 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || ||||| || || || || |||||||| ||||| Sbjct 2985960 TCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 2986006 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || ||||| ||| | ||| |||||| || || ||||| |||| || || || | || Sbjct 2986022 CAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCCAGGGTTCGGCCATC 2986081 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||||||||| || ||||| || | | |||||| || | || | | || ||||| Sbjct 2986082 TTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCTTTGTC 2986141 Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559 | ||| || ||||| ||| | | | |||||| |||||| || | ||||| | Sbjct 2986142 CTGGATTTTTGCCTTGA-CGTTGTCAATGGTGTCGGAGCTTTCCACCTCGAGAGTGATTG 2986200 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || || || || |||||||| ||||| Sbjct 2986201 TCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 2986234 >seq302 Length=4569211 Score = 116 bits (128), Expect = 4e-21 Identities = 156/216 (72%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| ||| || ||||| |||||||| | | || ||| |||| || Sbjct 222420 CACCAGGTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCCGCCAAGGTCCGCCCGTCCTC 222479 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| || | ||||||||||| | || | | ||||||||| Sbjct 222480 CAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCAGGTGGGATTCCCTCCTTGTCTTG 222539 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 || ||| ||| | | | | |||||| |||||||| |||| || ||||| || Sbjct 222540 AATTTTCGCCTTCACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGGGTTATGGTCTT 222599 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598 |||||||| ||||| || ||||| ||||| ||||| Sbjct 222600 CCCCGTCAGGGTTTTCACGAAGATCTGCATCTTTGC 222635 >seq1421 Length=9127415 Score = 109 bits (120), Expect = 6e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || || || | |||| ||| | || |||||| |||||||||||||||| | Sbjct 1343406 CCTCCCCTCAATCGGAGAACCAAATGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGCT 1343465 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| || |||||||| |||||||| |||| | ||| ||||| | || Sbjct 1343466 AGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGA 1343525 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | |||||||||| |||||| ||| | | | | ||||| |||| || Sbjct 1343526 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTATCAATTGTGTCGGAGCTC---TCA 1343582 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || ||||| || || ||||| || ||||| ||||| Sbjct 1343583 ACCTCCAAGGTAATAGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 1343632 Score = 107 bits (118), Expect = 2e-18 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || || || | |||| ||| | || |||||| ||||||||||| |||| Sbjct 1343632 TGCCTCCCCTCAATCGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATCGG 1343691 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || || |||| ||||| ||||| |||||||| |||| | ||||||||| | || Sbjct 1343692 CGAGGGTACGACCGTCCTCGAGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCG 1343751 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG---CTCGAT 46540 | | || |||||| || ||||| ||||| ||| | | | |||||| ||| Sbjct 1343752 GGATGCCCTCCTTATCTTGAATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAACTC--- 1343807 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || || || || || || || ||||| |||||||| ||||| Sbjct 1343808 TCGACCTCGAGAGTAATAGTCTTACCGGTTAGGGTTTTCACAAAGATCTGCAT 1343860 Score = 105 bits (116), Expect = 8e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||||| ||| || || |||| || |||||||| |||||||| Sbjct 1343213 CTCCTTCTGGATATTGTAGTCGGCTAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAA 1343272 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 1343273 GATAAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 1343332 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| ||| ||| || |||| || || || ||||| || || ||||| Sbjct 1343333 ATCAATTGTGTCAGAGCT---TTCAACCTCCAAGGTAATAGTCTTGCCGGTTAGGGTTTT 1343389 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 1343390 CACGAAGATCTGCAT 1343404 Score = 102 bits (112), Expect = 9e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || || || | |||| ||| | || |||||| |||||||||||||||| | Sbjct 1342950 CCTCCCCTCAATCGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGCT 1343009 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| || |||||||| |||||||| || | | ||||||||| | || Sbjct 1343010 AGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGG 1343069 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | || |||||| |||||| ||| ||| | | | |||||| ||| || Sbjct 1343070 ATTCCTTCTTTGTCCTGGATCTT-AGCTTTCACGTTGTCAATTGTGTCGGAGCTTTCAAC 1343128 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || ||||| || || || ||||| ||||| ||||| Sbjct 1343129 CTCCAAGGTAATAGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 1343176 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| ||||| || | || || ||||||||||| ||||| Sbjct 1342757 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 1342816 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||| ||||| | || | || ||||||||| ||| ||| ||| | ||| Sbjct 1342817 GATGAGCCTCTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTCGCCTTCA-CGT 1342875 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||| || ||| ||| || |||| || ||||| ||||| || || || | Sbjct 1342876 TGTCAATCGTATCCGAGCT---TTCAACCTCCAAGGTAATGGTCTTGCCGGTGAGGGTCT 1342932 Query 46578 TAACAAAGATTTGCAT 46593 |||| ||||| ||||| Sbjct 1342933 TAACGAAGATCTGCAT 1342948 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||| ||||| || ||||||| ||||| | | || || Sbjct 1342512 ACAAGATGCAGAGTAGACTCCTTCTGGATGTTATAGTCGGCCAGAGTCCTTCCATCTTCC 1342571 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || ||||| || ||||| | |||||| || | || | | ||||||||| Sbjct 1342572 AGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCTTGA 1342631 Query 46505 ATCTTCTTCTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 || || ||| | ||| | || |||||| |||||| |||| || || || || Sbjct 1342632 ATTTTAGCCTTCA-CGTTGTCAATTGTGTCGGAGCTTTCCACCTCCAGGGTAATAGTCTT 1342690 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||||||||| || || || ||||| |||||| Sbjct 1342691 GCCCGTCAGGGTCTTCACGAAGATCTGCATT 1342721 >seq1830 Length=882674 Score = 104 bits (114), Expect = 3e-17 Identities = 165/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | |||| ||||| ||| | ||| |||||||| || |||||||| | Sbjct 346650 TGCCTCCCCTCAGTCGCAGCACCAAATGGAGTGTTGACTCCTTTTAAATGTTGTAGTCTG 346709 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | | || |||||||||||||| || || |||| |||||||| || | | Sbjct 346710 CAAGTGTCCTCCCATCCTCGAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGATCTGGGG 346769 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | || ||||||||| ||||| | ||| | ||| | | | || || |||| Sbjct 346770 GAATGCCTTCCTTGTCCTGAATCTT-TGCTTTAACGTTGTCAATTGTATCTGAGCTC--- 346825 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||| |||||||| || || | | || || |||||||| ||||| Sbjct 346826 TCCACTTCCAATGTGATGGTCTTCCCTATTAAGGTCTTGACAAAGATCTGCAT 346878 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | |||| ||| | ||| | ||| |||||| || ||||||||||| | Sbjct 346880 CCTCCCCTCAGGCGCAGCACTAAATGGAGTGTTGACTCCTTCTGAATATTGTAGTCTGCA 346939 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || |||||||||||||| || |||| | ||||||||| | || Sbjct 346940 AGTGTCCTACCATCCTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 346999 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA-TTCCAC 46545 | || ||||| || |||||| | ||| | | | | || | || || | ||| || Sbjct 347000 ATGCCTTCCTTATCTTGGATCTT-TGCTTTAACATTGTCAATG-GTATCTGAACTTCAAC 347057 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| || || || || || || |||||||| ||||| Sbjct 347058 CTCAAGTGTGATGGTCTTTCCTGTGAGTGTCTTCACAAAGATCTGCAT 347105 >seq268 Length=6919517 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| |||| ||| |||||| | || |||||||| || |||||||| Sbjct 3331848 TCCTTCTGGATGTTGTAATCGGCTAGGGTGCGCCCATCCTCGAGCTGTTTCCCGGCGAAA 3331907 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||||||||||||||| | || | || |||||||| ||| ||| ||||| | Sbjct 3331908 ATCAAGCGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCTTGGATTTTCGCCTTGACATTA 3331967 Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | || || |||| ||||| |||| ||||| || || || || | || || Sbjct 3331968 TCAATTGTATCGGAGCTC---TCCACCTCCAGAGTGATTGTCTTCCCAGTTAATGTCTTC 3332024 Query 46580 ACAAAGATTTGCAT 46593 || || || ||||| Sbjct 3332025 ACGAATATCTGCAT 3332038 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | ||| || |||| ||| |||||| || || ||||| || | | Sbjct 3332724 CCTCCGCGCAGACGGAGCACGAGGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCCGCT 3332783 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | ||||||||||||| || |||||||| || | ||||||||||| | ||| Sbjct 3332784 AGGGTTCTGCCGTCGTCGAGCTGTTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGA 3332843 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | ||||| ||| |||||| ||||| ||| | | | || || |||| || Sbjct 3332844 ATTCCTTCCTTATCCTGAATCTTCGCCTTGA-CGTTGTCGATGGTATCGGAGCTC---TC 3332899 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||| || || || || || ||||| |||||||||||||| Sbjct 3332900 GACCTCGAGAGTGATCGTCTTACCGGTAAGGGTTTTCACAAAGATTTGCAT 3332950 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||||| || || || ||||||||||| |||| ||| || || | || ||| Sbjct 3332058 ACCAGATGCAGCGTTGATTCTTTCTGGATATTGTAATCGGCTAGGGTTCGGCCATCCTCG 3332117 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || || ||||| ||||| | |||||| |||| || | | || || ||| Sbjct 3332118 AGCTGTTTACCCGCGAAAATCAACCTCTGCTGATCGGGAGGGATTCCTTCTTTATCCTGA 3332177 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 |||||| ||| | || | | || || ||| ||| || || | ||||| ||| Sbjct 3332178 ATCTTCGCCTTCACGTTCTCAATTGTATCCGAGCT---TTCAACTTCTAGGGTGATAGTT 3332234 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| ||||| || ||||||||||| Sbjct 3332235 TTCCCAGTCAGAGTTTTCACGAAGATTTGCAT 3332266 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | ||| || || | ||| ||||| || || ||||| || | | Sbjct 3332496 CCTCCGCGCAGACGGAGCACGAGGTGGAGTGTTGATTCCTTCTGAATGTTGTAATCCGCT 3332555 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | |||||||||||||||| |||||||| || | ||||||||||| | ||| Sbjct 3332556 AGGGTTCTGCCGTCGTCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGA 3332615 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATTCC 46543 | | ||||| ||| ||||| ||||| | | | ||| ||| ||| || Sbjct 3332616 ATTCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCGATCGTATCGGAACTC---TCG 3332672 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | || || || || || |||| ||||| || ||||| ||||| Sbjct 3332673 ACCTCGAGAGTAATCGTCTTACCAGTCAAGGTTTTCACGAAGATCTGCAT 3332722 >seq1361 Length=2134540 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| | || |||||| | || |||||||||||||| || || Sbjct 1711077 CTCCTTCTGGATATTGTAGTCTGCAAGTGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAA 1711018 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | |||||| || | || | | ||||||||| ||||| ||| | | Sbjct 1711017 TATCAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTAGCCTTCACATT 1710958 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | || || ||| ||||| |||| |||||||| || || || || || || Sbjct 1710957 ATCAATAGTATCTGAACTC---TCCACCTCCAGAGTGATGGTCTTCCCTGTAAGGGTCTT 1710901 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 1710900 GACAAAGATCTGCAT 1710886 >seq813 Length=2089867 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | |||||||| | || || ||||| || |||||||| Sbjct 907623 CTCCTTCTGGATGTTGTAATCCGCAAGAGTGCGGCCATCCTCCAGCTGTTTTCCGGCGAA 907564 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | |||||| || | || | | ||||||||| |||||| ||||| | Sbjct 907563 GATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 907504 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| ||| ||| || |||| |||||||| ||||| ||||| || || Sbjct 907503 ATCAATGGTGTCTGAGCT---TTCAACCTCCAGTGTGATGGTCTTGCCGGTCAGGGTCTT 907447 Query 46579 AACAAAGATTTGCAT 46593 || ||||||||||| Sbjct 907446 GACGAAGATTTGCAT 907432 >seq1509 Length=3727952 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||||||||||||||| || | || || ||| | || ||||||||||| ||||| || | Sbjct 2871430 CCTTTTGGATATTGTAATCCGCAAGCGTACGCCCATCTTCGAGCTGCTTCCCGGCAAAGA 2871371 Query 46464 TCAAGCGCTGCTGGTC 46479 |||||||||||||||| Sbjct 2871370 TCAAGCGCTGCTGGTC 2871355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565214250189360