Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq179 197 1e-45 seq813 154 1e-32 seq1576 140 3e-28 seq1421 134 1e-26 seq688 129 6e-25 seq302 125 7e-24 seq3321 107 2e-18 seq1361 104 2e-17 seq268 102 8e-17 seq1830 95.1 1e-14 >seq179 Length=2504955 Score = 197 bits (218), Expect = 1e-45 Identities = 561/848 (66%), Gaps = 18/848 (2%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || |||||||| || ||| | |||||||| ||||| || ||||||| ||| || ||| Sbjct 2366140 TTCTGATATTCTCCAACCCTCTTCTCAAAGAAATTGGTCTTTCCCTGTAAGCTGATCAGC 2366199 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTG--TTGTAGTGCTTGGTGCCGATCAGGTCGACGA 132721 ||| |||| || || || ||| ||||| ||| ||| || | | | Sbjct 2366200 TCCATCCAATCAAACGGATT--CTGAACATTGTACATCTTACTGCATCCCAATGCACCTA 2366257 Query 132722 GCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCA 132781 ||| || || ||||| || || |||||||| ||| || | ||| | |||| || Sbjct 2366258 GCAATCTATCAGCCACAAATTCTATGTATTGGCTCATCAGATCCCCATTCATCCCCACCA 2366317 Query 132782 GACGCACCGGCA-GCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | |||| || | |||| || | ||| | | ||| || | || || || | || Sbjct 2366318 AA-GCACAGGGAAGCGCGTCACACACGAATTCCCT-CTCAATATCAACAGCTTCAGCCAC 2366375 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAAT--GCTTGAACATCAAGCAA 132897 | | | | |||||| || ||||| | || | || | || | | | |||||| Sbjct 2366376 AAGTGACTTCACGCGCTCCTCGCTCAAC--TTCCTCCTCAGCAGCCCGTAGAGCAAGCAT 2366433 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || || ||||| ||||||||||| || | || || | || || ||| | ||| || Sbjct 2366434 GCGAAATCGCAGTGCAAGCCCTCATCTCGCGAGATCAACTCATTCGAGAAGGACAACCCC 2366493 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| || ||||| ||||| ||||| |||||||| ||||| || || ||||||| Sbjct 2366494 GGCATCAGACCGCGCTTTTTCAGCCAGAATATGGCACAAAAACTCCCGGAGAAGAAGATC 2366553 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 ||||| || || || |||| || ||||| |||| | ||| || | ||| Sbjct 2366554 CCCTCAACACAAGCAAAGGCCAACAAACGCTCAGCGAATGA---TTCCGAGCCATCAATC 2366610 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 ||||| || ||||| | ||||| | | || || |||| || || || |||| ||| Sbjct 2366611 CAGCGGAGAGCCCACTTAGCCTTCTTCTCCACACAGGGCACAGTATCAATCGCGTGGAAC 2366670 Query 133138 AAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197 || | | |||||||| || | ||| || || | || ||||| || Sbjct 2366671 AACCTGTCCTTCTCTTCAGAATCCTTGATGTAAGTCTCCAACAGAAGACTGTACATCTCA 2366730 Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAA-GCACCGCGCCTCGACCACCTG 133256 ||||| | ||||| |||||||| || || |||||||| |||| ||||||| | ||||| Sbjct 2366731 GAGTGGATATTCTCGATGGCGATCTGGAATCCGTAAAACGCAC-GCGCCTCCGCAACCTG 2366789 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 || || | ||| || || | ||||| || |||||||||||| |||||| || Sbjct 2366790 GACCTCCTTCATGAACCGTCCGGCGAGATTCTCCAAAACGATGCCGTCGGAGGCGGCAAA 2366849 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCG 133376 |||||| || | |||||| || || || ||||| | | | | | ||||| | || Sbjct 2366850 AAAGGCAAGTATGTGCTTAATAAAGTGCTTCTCGTCGGAGGTTAGGGCTTCCCACTGACG 2366909 Query 133377 CGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 |||| || || || |||||||| | ||||| || ||||| ||||||| ||||| Sbjct 2366910 GAGATCCTGAGAGAGATCAACCTCCTCCGCCGTCCAGAAAGACGCGACGGCTTTCTTGTA 2366969 Query 133437 CATACTCC 133444 ||| |||| Sbjct 2366970 CAT-CTCC 2366976 >seq813 Length=2089867 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||||||| |||| || ||| | || Sbjct 907204 ATGCAGATCTTCGTCAAGACCCTAACCGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 907263 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || ||||||||| | ||||| Sbjct 907264 GACACCATTGATAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCGGACCA 907322 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || |||||||| || |||| || |||||| ||||||||| Sbjct 907323 GCAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGTACCCTCGCCGACTACAA 907382 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || ||| | ||||| ||||||||||| ||| Sbjct 907383 CATCCAGAAGGAGTCCACCCTCCATCTCGTGCTCCGTTTGAGAGGAGGC 907431 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || |||||| |||| || ||| | | Sbjct 906976 ATGCAGATCTTCGTCAAAACCCTAACCGGAAAGACTATCACCCTCGAGGTGGAGAGCTCT 907035 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || ||||||||| | ||||| Sbjct 907036 GACACCATCGATAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCGGACCA 907094 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | || || | ||| || |||||||| || |||| ||| |||||| ||||||||| Sbjct 907095 GCAGAGACTGATCTTCGCCGGAAAACAGCTCGAGGACGGGCGTACCCTCGCCGACTACAA 907154 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || |||||||| ||| | || || || Sbjct 907155 CATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTCAGGGGAGG 907202 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||||| | || || || | | Sbjct 907432 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACCATCACACTGGAGGTTGAAAGCTCA 907491 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || ||||| ||| | || || Sbjct 907492 GACACCATTGATAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCA 907550 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || ||||||||||| || | ||||| || || ||||| Sbjct 907551 GCAGAGGCTTATCTTCGCCGGAAAACAGCTGGAGGATGGCCGCACTCTTGCGGATTACAA 907610 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| |||| || || |||||||| Sbjct 907611 CATCCAGAAGGAGTCGACTCTTCACTTGGTGCT 907643 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 |||| || ||||| || || || ||||| || || ||||| | || |||||| | ||| Sbjct 699308 TGCAGATCTTCGTGAAGACTCTGACGGGGAAGACGATCACTCTTGAGGTCGAGAGCTCCG 699249 Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC 38364 ||| | | | | | || | || || | ||||| || ||||| ||| ||||| | Sbjct 699248 ACACCATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCCCGGGACCAGC 699189 Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424 || |||| || | ||| || |||||||| | |||| | ||||| || ||||| | Sbjct 699188 AGAGGCTGATCTTCGCCGGAAAACAGCTCAAGGACGGCTGTACCCTTGCTGATTACAATA 699129 Query 38425 TCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| |||||| | | || | | || |||| ||||||||||| || Sbjct 699128 TCCAGAAGGAATCCAGTCTCCTTCTGATGCTCCGTTTGAGAGGAGG 699083 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||| || ||||||||||| | || || ||| | | Sbjct 907659 AATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATCACTCTTGAGGTTGAGAGCTC 907718 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| | || || | ||||| ||||| || ||| | ||||| Sbjct 907719 TGACACCATAGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 907778 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| |||| || || || || |||| || | | ||||| || || || Sbjct 907779 GCAGAGGCTGATTTTTGCAGGGAAGCAATTGGAAGATGGAAGGACCCTAGCTGATTATAA 907838 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || ||||| | || || ||| Sbjct 907839 CATCCAGAAGGAGTCTACCCTGCACCTTGTCCTTCGT 907875 >seq1576 Length=5940209 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| |||||||| || || |||||| | || || ||| | || Sbjct 2986462 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACAATCACCCTGGAAGTTGAGAGCTCC 2986403 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 2986402 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCA 2986344 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || |||||||| || || | || |||||| ||| ||||| Sbjct 2986343 GCAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGATGGCCGAACCCTCGCCGATTACAA 2986284 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| |||||| | || || || ||||| || |||||||| || ||| Sbjct 2986283 CATCCAGAAGGAATCCACCCTCCACTTGGTTCTCCGTTTGAGGGGTGGC 2986235 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || |||||| | || || || | || Sbjct 2986006 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTGGAAAGCTCC 2985947 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | |||||||| |||||||| ||||| ||| | || || Sbjct 2985946 GACACTATTGACAATGTCAAGGCAAAAATCCAGGACAAAGAAGGAATCCCCCCAGATCAG 2985887 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || ||||| || || | |||||||| ||| |||||| Sbjct 2985886 CAGAGGCTTATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTGGCCGATTACAAC 2985827 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||||||||||| |||||||| || || Sbjct 2985826 ATCCAGAAGGAGTCTACCCTTCATTTGGTGCTCCGTTTGAGGGGTGG 2985780 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| ||||| || |||| |||||| || Sbjct 2986690 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATAACTCTCGAGGTCGAGAGTTCC 2986631 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||||||||| | ||||| Sbjct 2986630 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCACCAGACCA 2986572 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || |||| || | ||| || || ||||| || |||| || ||||| ||| ||||| Sbjct 2986571 GCAAAGGCTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGTACCCTGGCCGATTACAA 2986512 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || |||||||| ||| | || || || Sbjct 2986511 CATCCAGAAGGAGTCAACTCTCCACTTGGTGCTCCGTCTCAGGGGTGG 2986464 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || ||||| |||| || || | || Sbjct 2986234 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACAATCACTCTCGAGGTGGAAAGCTCC 2986175 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | |||||||| |||||||| ||||| ||| | || || Sbjct 2986174 GACACCATTGACAACG-TCAAGGCAAAAATCCAGGACAAAGAAGGAATCCCCCCAGATCA 2986116 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||||| || || | || ||||| ||| ||||| Sbjct 2986115 GCAGAGGCTTATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGAACCCTGGCCGATTACAA 2986056 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| | || || |||||||||||| | |||| || || Sbjct 2986055 CATTCAGAAGGAGTCTACCCTTCATTTGGTGCTGAGGCTGAGGGGTGG 2986008 >seq1421 Length=9127415 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| || || ||| | || || ||| | || Sbjct 1343632 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACTATTACCTTGGAGGTTGAGAGCTCC 1343573 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| |||||||||||| | ||||| Sbjct 1343572 GACACAATTGATAACG-TGAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 1343514 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| |||| || | ||| || || ||||| || |||| || ||||| ||||||||| Sbjct 1343513 ACAGAGGCTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGTACCCTAGCCGACTACAA 1343454 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || |||||||| || || ||||| || || Sbjct 1343453 TATCCAGAAGGAGTCAACCCTTCATTTGGTTCTCCGATTGAGGGGAGG 1343406 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| || || ||| | || || || | | Sbjct 1343404 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACTATTACCTTGGAGGTTGAAAGCTCT 1343345 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| |||||||||||| | ||||| Sbjct 1343344 GACACAATTGATAACG-TGAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 1343286 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||||| || |||| || ||||| ||||||||| Sbjct 1343285 GCAGAGGCTTATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGTACCCTAGCCGACTACAA 1343226 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || ||||| || || ||||| || || Sbjct 1343225 TATCCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGATTGAGGGGAGG 1343178 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||| ||| | || || || | | Sbjct 1342948 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACCATTACCTTGGAGGTTGAAAGCTCG 1342889 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || |||| | || | ||||||| ||||| || || || || | ||||| Sbjct 1342888 GATACGATTGACAACG-TGAAGGCGAAAATCCAGGACAAGGAAGGCATCCCTCCTGACCA 1342830 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| ||||||| | ||| ||||| ||||| || || | || || || ||||||||| Sbjct 1342829 ACAGAGGCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTGCCGACTACAA 1342770 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| | || || || |||||||| Sbjct 1342769 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCT 1342737 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || |||||||| || || ||| | || || || | | Sbjct 1342721 AATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACTATTACCCTGGAGGTGGAAAGCTC 1342662 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | |||| | || | ||||| | ||||| ||||| ||||| | || | Sbjct 1342661 CGACACAATTGACAACG-TGAAGGCTAAAATTCAAGACAAGGAGGGGATTCCACCGGATC 1342603 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| || | || | || || ||||||||||| || | | || || |||||| | Sbjct 1342602 AGCAGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGAAGGACTCTGGCCGACTATA 1342543 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || |||||| | || || ||| Sbjct 1342542 ACATCCAGAAGGAGTCTACTCTGCATCTTGTCCTCCGT 1342505 >seq688 Length=8729492 Score = 129 bits (142), Expect = 6e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||||||||| || || || || || || ||||| || || |||||| |||| || || | Sbjct 4649449 AAAAATGCAGATCTTTGTGAAGACTCTGACGGGGAAGACGATCACCCTCGAGGTTGAATC 4649508 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | |||| | | | | | || | ||| |||| ||||| || || || ||||||| Sbjct 4649509 GTCGGACACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCAT-CCCGCCGG 4649567 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||||||||| | ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 4649568 ACCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACT 4649627 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| ||||| | || || || | ||||| || Sbjct 4649628 ACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCG 4649667 >seq302 Length=4569211 Score = 125 bits (138), Expect = 7e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || ||||| || ||||| ||| | || || || | Sbjct 222633 AAAGATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACCATAACCCTGGAGGTGGAATC 222574 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||||| | | | | | || | ||||| | ||||| |||||||| || | || Sbjct 222573 CTCCGACACCATCGACAATGTGAAGGCGAAAATTCAAGACAAGGAGGGAATCCCACCTGA 222514 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||||||||| | ||| || || |||||||| |||| ||| ||| | ||||| Sbjct 222513 CCAGCAGCGGCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGGCGGACCTTGGCGGACTA 222454 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| || || | || || || ||||||| || Sbjct 222453 CAACATCCAGAAAGAGTCTACTCTCCACCTGGTGCTTCG 222415 >seq3321 Length=7168875 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || || || || ||||| || || || ||| | || |||||| | Sbjct 34680 AAAATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACGATAACCCTAGAGGTCGAGTCA 34739 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | ||||||| ||||| ||||| || || | ||| Sbjct 34740 TCGGACACCATTGACAATGTGAAGGCGAAAATCCAGGACAAGGAGGGCATCCCACCAGAC 34799 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || ||||| | ||| || || |||| || |||| ||||||||| |||||| Sbjct 34800 CAGCAACGCCTCATCTTCGCCGGAAAGTAGCTCGAGGACGGGCGCACCCTTGCAGACTAC 34859 Query 38421 AACATCCAAAAGGA 38434 |||||||||||||| Sbjct 34860 AACATCCAAAAGGA 34873 >seq1361 Length=2134540 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || || |||||||| | || || ||| | Sbjct 1710658 ATGCAGATCTTTGTCAAAACACTAACTGGGAAGACCATCACACTGGAGGTTGAGAGTTCA 1710717 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | ||| || | ||||| || || ||||| | |||||| Sbjct 1710718 GATACCATTGACAATGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAA 1710777 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || || |||||||| || || | | | || || ||||||||| Sbjct 1710778 CAGCGTTTGATCTTTGCAGGTAAACAGCTTGAGGATGGGAGGACACTTGCAGACTACAAC 1710837 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || ||||| | ||||| |||||||||||||| ||||| ||||| Sbjct 1710838 ATTCAGAAGGAGTCTACGCTCCATTTGGTGCTGCGATTGAGGGGCGG 1710884 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || ||||| |||||||| | || || ||| | | Sbjct 1709974 ATGCAGATCTTTGTGAAAACTCTAACTGGCAAGACCATCACACTTGAGGTTGAGAGCTCA 1710033 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | || ||||| |||||||| | |||||| Sbjct 1710034 GATACCATTGACAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGACCAA 1710093 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || ||||| || || | || || || ||||||||| Sbjct 1710094 CAGAGGCTTATATTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTTGCAGACTACAAC 1710153 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| || | || || ||| | || || ||| || | || ||| Sbjct 1710154 ATCCAAAAAGAGTCCACCCTCCATCTTGTCCTCCGTCTGCGTGGTGGC 1710201 >seq268 Length=6919517 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || || | || || || || ||||| | || || ||| | || Sbjct 3332038 ATGCAGATATTCGTGAAGACATTAACTGGGAAGACAATCACTCTGGAGGTGGAGAGCTCC 3331979 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | ||||||| ||||| || || ||||| | ||||| Sbjct 3331978 GATACAATTGATAATGTCAAGGCGAAAATCCAAGACAAGGAAGGCATTCCTCCAGACCAG 3331919 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| || |||||||| || || | ||||||||| ||| |||||| Sbjct 3331918 CAGCGCTTGATTTTCGCCGGGAAACAGCTCGAGGATGGGCGCACCCTAGCCGATTACAAC 3331859 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || ||| | || || ||| Sbjct 3331858 ATCCAGAAGGAATCCACTCTCCATCTTGTTCTCCGT 3331823 >seq1830 Length=882674 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/157 (74%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 38315 AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCAT 38374 |||| |||||| ||| || | ||||| || || |||||| | || || ||||| || || Sbjct 346806 AACG-TTAAAGCAAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGCAGCGACTGAT 346748 Query 38375 TTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || || ||||| ||||| || || | | | || || ||||||||||| ||||||| Sbjct 346747 TTTTGCTGGCAAGCAGCTCGAGGATGGGAGGACACTTGCAGACTACAACATTTAAAAGGA 346688 Query 38435 AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 | || || |||||||||||||| |||| || ||| Sbjct 346687 GTCAACACTCCATTTGGTGCTGCGACTGAGGGGAGGC 346651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500151430117120