Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq3418 625 4e-174 seq2762 553 2e-152 seq684 306 5e-78 seq3417 241 2e-58 seq1564 208 9e-49 seq2647 203 4e-47 seq2653 187 3e-42 seq2833 163 3e-35 seq1029 116 5e-21 seq3087 91.5 2e-13 seq2360 87.8 2e-12 seq140 87.8 2e-12 seq2036 82.4 9e-11 >seq3418 Length=161897 Score = 625 bits (692), Expect = 4e-174 Identities = 735/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 179748 TTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTTCTG 179807 ||||| | ||| ||||| || | ||||| || || | || ||||| || ||| || Sbjct 1559 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1500 Query 179808 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 179866 ||||| || ||| | ||| | |||||| |||| || || | |||||||| |||||||| Sbjct 1499 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTCC 1441 Query 179867 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 179926 || || || || ||||| || |||||||| || |||| || || | || || ||||| Sbjct 1440 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACAA 1381 Query 179927 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 179986 || ||||||||||| || |||| |||| || || ||| | ||||| || || || Sbjct 1380 TATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAGGTTTACACTTTTACCCAAT 1321 Query 179987 CTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTCGT 180046 |||||||| ||||| |||| || ||| | || ||||| ||||||| |||| | || Sbjct 1320 TTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 1261 Query 180047 CTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTTTCTTATCG 180106 | |||||| | |||| | | |||||||||||||||||||||||| || || Sbjct 1260 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1201 Query 180107 CTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTGCAGCATCTG 180165 ||||||||||||| ||||| ||| || ||||| || ||||| || || || || | | Sbjct 1200 TCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCG 1142 Query 180166 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCA 180225 | || ||| | |||| || ||||||| || || ||||| | ||||| || || | Sbjct 1141 CAGTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 1082 Query 180226 TTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACC 180285 | ||||| || ||||| | |||| |||| ||||| || ||||||||||| || ||||||| Sbjct 1081 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 1022 Query 180286 CCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACG 180345 | || || ||| | || ||||| ||||| |||||||| || || ||| || ||||| | Sbjct 1021 CATTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 962 Query 180346 GTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACG 180405 |||| |||| || ||| || | | |||||||| |||| ||| || ||| | | Sbjct 961 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 902 Query 180406 GTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCG 180465 |||||| || |||||||| ||||| || || || ||||| ||||| ||||| || || | Sbjct 901 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 842 Query 180466 GTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTGG 180525 | || |||||||||| ||||| ||||||||||| ||||| | ||||||||| | | Sbjct 841 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 782 Query 180526 CAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 180585 | || |||||||| || || |||||||||||||| | || | ||||| |||||||||| Sbjct 781 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCA 722 Query 180586 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACA 180645 |||| ||||||||||| |||||||| ||| | ||||| ||||||| ||||| | || | Sbjct 721 ACCTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATA 662 Query 180646 CTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 180705 ||||||| || | | ||||| ||| || ||||||||||||||||| || ||||||| Sbjct 661 CTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 602 Query 180706 CTCACAACTTCCCACTTGACCTGGCAGCT 180734 |||| |||||||| || ||||| || ||| Sbjct 601 CTCATAACTTCCCTCTAGACCTAGCTGCT 573 Score = 565 bits (626), Expect = 3e-156 Identities = 728/1002 (73%), Gaps = 2/1002 (0%) Strand=Plus/Plus Query 181436 GATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGACTACTTCTTTTT 181495 ||||||||| | | ||||| || || ||||| |||||||| || ||| | || ||| Sbjct 34473 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 34532 Query 181496 CCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTTGTTACGTCGTGG 181555 || ||| ||| | || | || || ||| |||| || || || ||||| || || ||| Sbjct 34533 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 34592 Query 181556 TACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTG 181615 || ||||| |||||||| |||||| | || ||| |||||| | || || || || Sbjct 34593 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAGTT 34652 Query 181616 TCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAAGCTCAG 181675 || || |||||| | | | | |||||| | | |||| |||||||||||||| || Sbjct 34653 TCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34712 Query 181676 GGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGA 181735 || ||||| || ||| ||| | ||||| || ||| ||||||| || |||||||| Sbjct 34713 GGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGC 34772 Query 181736 GCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAAT 181794 || |||| || || ||||| ||| | | ||||| || |||||||| ||| || | | Sbjct 34773 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCA-ATT 34831 Query 181795 CCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCT 181854 || || || ||||| || || || || ||||| |||||||| || || |||||||| | Sbjct 34832 GCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTT 34891 Query 181855 CATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGAT 181914 || ||||| || || || || |||||||||||||||| ||||| ||||| || || || Sbjct 34892 GATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTAT 34951 Query 181915 TTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATAT 181974 || || ||| | ||||| | || || |||||||||||||| | || || || ||||| Sbjct 34952 ATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 35011 Query 181975 GATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCACGGTGTGACCGT 182034 |||||| ||||| ||| | |||| | || || || | || ||||| |||| ||||| Sbjct 35012 GATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGT 35071 Query 182035 GGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAAC 182094 || |||||| | | | |||||||||| |||||||| ||| || || | |||| Sbjct 35072 AGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAAC 35131 Query 182095 TCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGG 182154 |||| |||||||| |||||||||||||| || |||||||| ||||| || ||||| || Sbjct 35132 TCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGG 35191 Query 182155 TATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGG 182214 |||| ||| |||||| | ||||| |||||||||||| | ||||| || || | || Sbjct 35192 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 35251 Query 182215 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 182274 | | |||| ||| | | || | | ||||| || || ||||| ||||| |||||||| Sbjct 35252 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTT 35311 Query 182275 TGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAA 182334 || || |||||||| | ||| | ||||| || || || || || |||||||| || || Sbjct 35312 CGTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAA 35371 Query 182335 CATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCACATGAGAA 182394 |||||||| || |||||| | ||||| ||| | || | ||||| || ||||| || Sbjct 35372 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAA 35431 Query 182395 CTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 | || | ||||||||||| || |||| | || ||||| || Sbjct 35432 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 35473 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| || ||||||||||||| ||| Sbjct 110136 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAAT 110077 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 110076 CCTACTTGGGGAG 110064 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| || ||||||||||||| ||| Sbjct 139879 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAAT 139938 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 139939 CCTACTTGGGGAG 139951 >seq2762 Length=458829 Score = 553 bits (612), Expect = 2e-152 Identities = 726/1002 (72%), Gaps = 3/1002 (0%) Strand=Plus/Minus Query 181436 GATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGACTACTTCTTTTT 181495 ||||||||| | | ||||| || || ||||| |||||||| || ||| | || ||| Sbjct 61303 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 61244 Query 181496 CCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTTGTTACGTCGTGG 181555 || ||| ||| | || | || || ||| |||| || || || ||||| || || ||| Sbjct 61243 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 61184 Query 181556 TACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTG 181615 || ||||| |||||||| |||||| | || ||| |||||| | || || || || Sbjct 61183 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAGTT 61124 Query 181616 TCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAAGCTCAG 181675 || || |||||| | | | | |||||| | | |||| |||||||||||||| || Sbjct 61123 TCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 61064 Query 181676 GGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGA 181735 || ||||| || ||| ||| | ||||| || ||| ||||||| || |||||||| Sbjct 61063 GGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGC 61004 Query 181736 GCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAAT 181794 || |||| || || ||||| ||| | | ||||| || |||||||| ||| || | | Sbjct 61003 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCA-ATT 60945 Query 181795 CCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCT 181854 || | || ||||| || || || || ||||| |||||||| || || |||||||| | Sbjct 60944 GCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTT 60885 Query 181855 CATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGAT 181914 || ||||| || || || || |||||||||||||||| ||||| ||||| || || || Sbjct 60884 GATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTAT 60825 Query 181915 TTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATAT 181974 || || ||| | ||||| | || || |||||||||||||| | || | || ||||| Sbjct 60824 ATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCATAT 60765 Query 181975 GATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCACGGTGTGACCGT 182034 |||||| ||||| ||| | |||| | || || || | || ||||| |||| ||||| Sbjct 60764 GATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGT 60705 Query 182035 GGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAAC 182094 || |||||| | | | |||||||||| |||||||| ||| || || | |||| Sbjct 60704 AGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAAC 60645 Query 182095 TCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGG 182154 |||| |||||||| |||||||||||||| || |||||||| ||||| || ||||| || Sbjct 60644 TCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGG 60585 Query 182155 TATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGG 182214 |||| ||| |||||| | ||||| |||||||||||| | ||||| || || | || Sbjct 60584 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 60525 Query 182215 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 182274 | | |||| ||| | || | | ||||| || || ||||| ||||| |||||||| Sbjct 60524 TTTATGGATGAGTGTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTT 60465 Query 182275 TGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAA 182334 || || ||||||||| | ||| | ||||| || || || || || |||||||| || || Sbjct 60464 CGTTTCTCAAGAAATC-GGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAA 60406 Query 182335 CATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCACATGAGAA 182394 |||||||| || |||||| | ||||| ||| | || | ||||| || ||||| || Sbjct 60405 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAA 60346 Query 182395 CTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 | || | ||||||||||| || |||| | || ||||| || Sbjct 60345 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 60304 >seq684 Length=2855409 Score = 306 bits (338), Expect = 5e-78 Identities = 392/538 (73%), Gaps = 2/538 (0%) Strand=Plus/Plus Query 181541 TTTGTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTC 181600 ||||| || || ||||| ||||| |||||||| |||||| | || ||| |||||| Sbjct 2853884 TTTGTAACTTCATGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTC 2853943 Query 181601 CTTACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGG 181660 | || || || || || || |||||| | | | | |||||| | | |||| ||| Sbjct 2853944 TTAACTGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGG 2854003 Query 181661 GGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTT 181720 ||||||||||| || || ||||| || ||| ||| | ||||| || ||| ||||| Sbjct 2854004 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTT 2854063 Query 181721 GTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCT 181780 || || |||||||| || |||| || || ||||| ||| | | ||||| || |||||| Sbjct 2854064 GTTGCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCT 2854123 Query 181781 CG-TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATT 181839 || ||| || | | || || || ||||| || || || || ||||| |||||||| || Sbjct 2854124 CGATCTGTTCA-ATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTT 2854182 Query 181840 CGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTT 181899 || |||||||| | || ||||| || || || || |||||||||||||||| ||||| Sbjct 2854183 TGTTTCTGTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTT 2854242 Query 181900 CGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCT 181959 ||||| || || || || || ||| | ||||| | || || |||||||||||||| | Sbjct 2854243 TGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATT 2854302 Query 181960 CAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAAT 182019 || || || ||||||||||| ||||| ||| | |||| | || || || | || || Sbjct 2854303 GAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTAT 2854362 Query 182020 TCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTC 182077 ||| |||| ||||| || |||||| | | | |||||||||| |||||||| ||| Sbjct 2854363 TCATGGTGCTACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 2854420 >seq3417 Length=265768 Score = 241 bits (266), Expect = 2e-58 Identities = 244/318 (77%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 180417 GGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATC 180476 |||||||| ||| | || || || ||||| ||||| ||| || || || || ||||| Sbjct 156208 GGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGATC 156149 Query 180477 TTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCT 180536 ||||| ||||| ||||||||||| ||||| | ||||||||| | || || |||||| Sbjct 156148 TTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCT 156089 Query 180537 GTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGT 180596 || || || |||||||||||||| | || | ||||| |||||||||||||| || ||| Sbjct 156088 GTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATGGT 156029 Query 180597 TTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGGGCAGAC 180656 | || |||||||| ||| | ||||| | ||||| || || | || |||||||| || Sbjct 156028 TGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTGAT 155969 Query 180657 GTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 180716 | | ||||| ||| || ||||||||||||||||| || ||||||||||| |||||| Sbjct 155968 ATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 155909 Query 180717 CCACTTGACCTGGCAGCT 180734 || || ||||| || ||| Sbjct 155908 CCTCTAGACCTAGCTGCT 155891 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||||||| Sbjct 34438 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAAT 34379 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 34378 CCTACTTGGGGAG 34366 >seq1564 Length=1404973 Score = 208 bits (230), Expect = 9e-49 Identities = 273/373 (73%), Gaps = 4/373 (1%) Strand=Plus/Minus Query 179790 GGTTGGTTCGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGT 179848 || ||||| || ||| ||||||| || ||| | ||| | |||||| |||| || || | Sbjct 141179 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 141121 Query 179849 CGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTC 179908 |||||||| |||||||| || || || || ||||| || |||||||| || |||| || Sbjct 141120 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 141061 Query 179909 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGG 179968 || | || || ||||| || ||||||||||| || |||| |||| || || | Sbjct 141060 TCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAAG 141001 Query 179969 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGG 180028 | | ||||| || || || |||||||| ||||| |||| || ||| | || ||||| || Sbjct 141000 TTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGG 140941 Query 180029 TCCTTTCCAACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGA 180088 ||||| |||| | || | |||||| | |||| | | |||||||||||||| Sbjct 140940 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 140881 Query 180089 GTGGGAACTTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTC 180147 |||||||||| || || ||||||||||||| ||||| ||| || ||||| || |||| Sbjct 140880 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATACTCAGCTC 140822 Query 180148 CAGTCGCTGCAGC 180160 | || || || || Sbjct 140821 CTGTTGCAGCTGC 140809 >seq2647 Length=4788780 Score = 203 bits (224), Expect = 4e-47 Identities = 275/382 (72%), Gaps = 1/382 (0%) Strand=Plus/Minus Query 180178 TCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCT 180237 |||| || |||| || || || ||||| | ||||| || || || ||| | || | Sbjct 734471 TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTACTT 734412 Query 180238 TCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGC 180297 |||| | |||| |||| ||||| | ||||||||||| || |||||||| ||||| ||| Sbjct 734411 TCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCATTCCATATGA 734352 Query 180298 TGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGTTA 180357 | || ||||| |||| |||||||| || || ||| | ||||| ||||| |||| | Sbjct 734351 TAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAA 734292 Query 180358 CCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTG 180417 ||| || | | ||||||| ||| ||| || ||| | |||||||| || | Sbjct 734291 TTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGGTTACAAATTCG 734232 Query 180418 GTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATCT 180477 ||||||| ||||| | || || ||||| | || ||||| || || || || |||||| Sbjct 734231 GTCAAGAGGAAGA-CCTTATAATATCGTAGTTGTTCATGGTTATTTTGGCCGATTGATCT 734173 Query 180478 TCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTG 180537 || | ||||| ||||||||||| ||||| | ||||||||| | || || |||| || Sbjct 734172 TCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCTTG 734113 Query 180538 TCGTTGGCATCTGGTTCACTGC 180559 | | || |||||||||||||| Sbjct 734112 TAGCAGGTATCTGGTTCACTGC 734091 Score = 138 bits (152), Expect = 1e-27 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 180570 AGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAA 180629 || || |||||||||||||| ||||||||||| |||||||| || | |||||| ||||| Sbjct 733759 AGTACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAA 733700 Query 180630 GGTCGTGTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTT 180689 || ||||| | || |||||||| || | | |||| ||| || |||||||||||| Sbjct 733699 GGCCGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTT 733640 Query 180690 ATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTGGC 180730 ||||| || ||||||||| |||||||| || ||||| || Sbjct 733639 ATGCATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGC 733599 >seq2653 Length=4899193 Score = 187 bits (206), Expect = 3e-42 Identities = 280/395 (71%), Gaps = 11/395 (3%) Strand=Plus/Plus Query 180117 CGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 180175 ||| | ||||| ||| || ||||| || ||||| || || || || | || || ||| | Sbjct 3225428 CGCTCTTGGAT-TGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTT 3225486 Query 180176 CGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCAC 180235 |||| || ||||||| || || ||||| | ||||| || || || ||||| || Sbjct 3225487 GATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 3225546 Query 180236 CTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGA--------TGCACCCC 180287 ||||| | |||| |||| ||||| || |||||||||| || | ||||||| Sbjct 3225547 TTTCAATT-CATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCA 3225605 Query 180288 TTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGT 180347 || || ||| | || ||||| ||||| |||||||| || || ||| || ||||| ||| Sbjct 3225606 TTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 3225665 Query 180348 TCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACGGT 180407 || |||| || ||| || | |||||||| |||| ||| | ||| | ||| Sbjct 3225666 TCCTTGGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGT 3225725 Query 180408 TACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCGGT 180467 |||| || |||||||| ||||| || || || ||||| ||||| ||||| || || || Sbjct 3225726 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGC 3225785 Query 180468 CGTCTGATCTTCCAGTATGCATCGTTCAACAACTC 180502 || ||||||| || ||||| ||||||||||| Sbjct 3225786 CGATTGATCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq2833 Length=2661255 Score = 163 bits (180), Expect = 3e-35 Identities = 238/334 (71%), Gaps = 2/334 (1%) Strand=Plus/Plus Query 181745 CTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAATCCGACCCTA 181803 || || |||| ||| | | ||||| || |||||||| ||| || | | || || || Sbjct 1209154 CTAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCA-ATTGCGGCCTTA 1209212 Query 181804 CAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCC 181863 |||| || || || || ||| | |||||||| || || |||||||| | || ||||| Sbjct 1209213 TAATGTCATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCC 1209272 Query 181864 TCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTT 181923 || || || || ||||||||||||||| ||||| ||||| || || || || || || Sbjct 1209273 GCTAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGATT 1209332 Query 181924 CCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGT 181983 | | || || | || || |||||||||||||| | || || || ||||||||||| || Sbjct 1209333 CATCCTTTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGT 1209392 Query 181984 TGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATAC 182043 || || | |||| | || || | | || ||||| |||| ||||| | ||||| Sbjct 1209393 TGTCAGTGTATTGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAATAC 1209452 Query 182044 TCTGTATCAAGACGGTGACCAAGCAAATACTTTC 182077 | | | | |||||||||| |||||||| ||| Sbjct 1209453 TTTATTTGAAGACGGTGATGGTGCAAATACATTC 1209486 >seq1029 Length=16155 Score = 116 bits (128), Expect = 5e-21 Identities = 246/361 (68%), Gaps = 6/361 (2%) Strand=Plus/Minus Query 181655 CTTTGGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGG-GTCCAACTT-GGGGGACTCT 181712 || |||||||||| || | |||| ||| || ||| |||| ||| ||||| || | Sbjct 11944 CTCTGGGGTCCTGCCGCCCCCGGCGCTTTTCCTCGTTGGTGTCC--CTTCGGGGGTCTGT 11887 Query 181713 GGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTG 181772 || ||||||| || |||| ||| || |||| || ||||||| || || | | || | Sbjct 11886 GGCCTTTTGTTGCTCTCCCCGGCGCTTTCGGCCTCCTCGGTTTCCTGTTCCGTCCCTTCG 11827 Query 181773 AACTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATT 181831 |||||||| ||| || | || || | ||| | || || || ||||| || Sbjct 11826 CGCTTGCTCGCTCTGTTCCCT-TGCGGCCTTCTCCTGCCCTCGCCTTCTCTGGTCCCCTT 11768 Query 181832 GCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCG 181891 ||||| || || ||||| || | | | ||| || || | || |||||||||||||| Sbjct 11767 GCTGTTTTTGTTTCTGTCTTCTTGCTTTCTCCGCTCGGTCCGTCTGGTTGGTTCTTTGCG 11708 Query 181892 CCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAAT 181951 || |||| |||||||| || | || |||||||| ||||| | | || |||| | | Sbjct 11707 CCTCGTTTTGGTGTCGCCGCTCTCTTTCGCTTCCTCCTCTTTTTTCCCGGGTTTCCTCCT 11648 Query 181952 TGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTC 182011 ||| | | ||||| | | || |||| ||||| ||| || |||| | || || ||| Sbjct 11647 TGGCCCTTGCCCCCCTTTCCTCTGCTGGGCGTTGCCGGTGTCTTGGGCGCTGCCTTGCTC 11588 Query 182012 T 182012 | Sbjct 11587 T 11587 >seq3087 Length=4007656 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||||||| Sbjct 1652133 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAAT 1652192 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 1652193 CCTACTTGGGGAG 1652205 >seq2360 Length=1656724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||||| ||||||||||||| ||| Sbjct 325833 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGTTGTTAATCGATTGGTCGTAGGTTCGAAT 325892 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 325893 CCTACTTGGGGAG 325905 >seq140 Length=324460 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| || ||||||||||||| ||| Sbjct 315915 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAAT 315856 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 315855 CCTACTTGGGGAG 315843 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| || ||||||||||||| ||| Sbjct 316551 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAAT 316610 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 316611 CCTACTTGGGGAG 316623 >seq2036 Length=7432206 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| || |||||||||||| ||| Sbjct 602576 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTTGAAT 602635 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 602636 CCTACTTGGGGAG 602648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610370720796720