Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq3418 708 0.0 seq2762 581 4e-161 seq684 318 7e-82 seq1564 264 1e-65 seq2653 248 1e-60 seq3417 241 1e-58 seq2647 235 6e-57 seq2833 165 9e-36 seq1029 107 2e-18 >seq3418 Length=161897 Score = 708 bits (784), Expect = 0.0 Identities = 735/961 (76%), Gaps = 2/961 (0%) Strand=Plus/Minus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 ||||| || || |||| ||||| || ||| ||||||||||||| | | | ||||| Sbjct 1532 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1473 Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| || || | |||||| | |||||||| || || || || |||||||||||||| Sbjct 1472 -TCTGTATTTATTATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1414 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990 ||||||| | || || || | || || ||||| || ||||||||||| || |||| | Sbjct 1413 ACCTGTTTCTGGATCTCTGCTTTACGGAAACAATATTATCTCTGGTGCTATTATTCCGAC 1354 Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || ||| | ||||| ||||| ||||||||||| |||||| |||||||||| Sbjct 1353 TTCTGCAGCTATAGGTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATG 1294 Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTATCTATGC 164110 | | |||||||| ||||||| |||| | || | |||||| | | ||| | | Sbjct 1293 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1234 Query 164111 ATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGT 164170 ||||||||||||||||||||||| || |||||| |||||||| ||||||||| ||| Sbjct 1233 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 1174 Query 164171 TGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCA 164230 ||| ||||| || || |||||||| || ||||||| ||| || |||| || ||||||| Sbjct 1173 TGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCA 1114 Query 164231 AGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGT 164290 || || ||||| | ||||| || || |||||||| || ||||| | |||| | || Sbjct 1113 GGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGT 1054 Query 164291 GTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGT 164350 ||||| || ||||||||||| || |||||||| || |||||| | ||||| ||||| || Sbjct 1053 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCATATGTTAGGCGTAGCTGGTGT 994 Query 164351 ATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 164410 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| || | | Sbjct 993 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 934 Query 164411 TGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAAC 164470 |||||||| |||| ||| || ||| | ||||||| || |||||||| |||||||| Sbjct 933 GGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 874 Query 164471 ATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATT 164530 || || || || || ||||| ||||| ||||| || ||||||||||||| ||| || Sbjct 873 TTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 814 Query 164531 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTT 164590 ||||||||| ||||| || ||||||||| | ||||| |||||||| || || |||||||| Sbjct 813 CAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT 754 Query 164591 CACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 164650 ||| || | ||| | ||| |||||||||||||| ||||||||||| |||||||| || Sbjct 753 CACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATC 694 Query 164651 CATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGG 164710 | | | ||| |||| || ||||| | || |||||||| || | | ||||| ||| Sbjct 693 CGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGCTAA 634 Query 164711 TCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTGC 164770 || ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| Sbjct 633 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGC 574 Query 164771 T 164771 | Sbjct 573 T 573 Score = 594 bits (658), Expect = 6e-165 Identities = 738/1004 (74%), Gaps = 6/1004 (1%) Strand=Plus/Plus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 ||||||||| | | || |||||||||||||| || ||||| || || | || ||| Sbjct 34473 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 34532 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || ||| ||| | ||| | || |||||| | || || || || || | || ||| Sbjct 34533 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 34592 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 165383 ||||| || || ||||| ||||||||| |||| ||| |||| ||||||| |||| |||| Sbjct 34593 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAG 34650 Query 165384 TTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTC 165443 |||| ||||| || | | | | |||||| | || | || ||||||||||| || | Sbjct 34651 TTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 34710 Query 165444 AAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACG 165503 |||| ||||| | ||| ||| | ||||| || ||| ||||||| || ||||||| Sbjct 34711 AAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACG 34770 Query 165504 GGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGT 165562 | ||||||| ||||| ||||||||| | ||||| || || | || || ||| || | Sbjct 34771 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT 34830 Query 165563 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 165622 | || || || ||||| || || ||||||||||| || |||||||||||| || || Sbjct 34831 -TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 34889 Query 165623 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCA 165682 | || || || || ||||| || ||||||| || || || ||| || || ||||| Sbjct 34890 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 34949 Query 165683 ATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCAT 165742 || || | ||| | ||||| | ||||| || ||||| ||||| ||||| || |||||| Sbjct 34950 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 35009 Query 165743 ATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACA 165802 |||||||| ||||| ||| | |||| | ||| ||||| | || || ||||||| ||| Sbjct 35010 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 35069 Query 165803 GTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCT 165862 ||||| |||||| | | | |||| ||||| | ||||||||| ||| || ||| || | Sbjct 35070 GTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCA 35129 Query 165863 ACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTC 165922 |||||| |||||||| || |||||||||||||| ||||| || ||||| || ||||| Sbjct 35130 ACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTT 35189 Query 165923 GGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 165982 || |||| ||| ||||| | ||||| |||||||||||| | ||||| || || | Sbjct 35190 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 35249 Query 165983 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 166042 ||| | |||| ||| | | || | | ||||| || || ||||| ||||| |||||| Sbjct 35250 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 35309 Query 166043 TTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAA 166102 || || || ||||| || | ||||| ||||| || || |||||||| |||||||| ||| Sbjct 35310 TTCGTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAA 35369 Query 166103 AACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAG 166162 || |||||||| || |||||| ||||||||||| |||| | ||||| || ||||| Sbjct 35370 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAA 35429 Query 166163 AACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 ||| || | |||||||| || ||||| || | || ||||| || Sbjct 35430 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 35473 >seq2762 Length=458829 Score = 581 bits (644), Expect = 4e-161 Identities = 736/1004 (73%), Gaps = 7/1004 (1%) Strand=Plus/Minus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 ||||||||| | | || |||||||||||||| || ||||| || || | || ||| Sbjct 61303 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 61244 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || ||| ||| | ||| | || |||||| | || || || || || | || ||| Sbjct 61243 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 61184 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 165383 ||||| || || ||||| ||||||||| |||| ||| |||| ||||||| |||| |||| Sbjct 61183 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAG 61126 Query 165384 TTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTC 165443 |||| ||||| || | | | | |||||| | || | || ||||||||||| || | Sbjct 61125 TTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 61066 Query 165444 AAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACG 165503 |||| ||||| | ||| ||| | ||||| || ||| ||||||| || ||||||| Sbjct 61065 AAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACG 61006 Query 165504 GGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGT 165562 | ||||||| ||||| ||||||||| | ||||| || || | || || ||| || | Sbjct 61005 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT 60946 Query 165563 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 165622 | || | || ||||| || || ||||||||||| || |||||||||||| || || Sbjct 60945 -TGCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 60887 Query 165623 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCA 165682 | || || || || ||||| || ||||||| || || || ||| || || ||||| Sbjct 60886 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 60827 Query 165683 ATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCAT 165742 || || | ||| | ||||| | ||||| || ||||| ||||| ||||| | |||||| Sbjct 60826 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCAT 60767 Query 165743 ATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACA 165802 |||||||| ||||| ||| | |||| | ||| ||||| | || || ||||||| ||| Sbjct 60766 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 60707 Query 165803 GTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCT 165862 ||||| |||||| | | | |||| ||||| | ||||||||| ||| || ||| || | Sbjct 60706 GTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCA 60647 Query 165863 ACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTC 165922 |||||| |||||||| || |||||||||||||| ||||| || ||||| || ||||| Sbjct 60646 ACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTT 60587 Query 165923 GGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 165982 || |||| ||| ||||| | ||||| |||||||||||| | ||||| || || | Sbjct 60586 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 60527 Query 165983 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 166042 ||| | |||| ||| | || | | ||||| || || ||||| ||||| |||||| Sbjct 60526 GGTTTATGGATGAGTGTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 60467 Query 166043 TTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAA 166102 || || || ||||| ||| | ||||| ||||| || || |||||||| |||||||| ||| Sbjct 60466 TTCGTTTCTCAAGAAATC-GGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAA 60408 Query 166103 AACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAG 166162 || |||||||| || |||||| ||||||||||| |||| | ||||| || ||||| Sbjct 60407 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAA 60348 Query 166163 AACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 ||| || | |||||||| || ||||| || | || ||||| || Sbjct 60347 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 60304 >seq684 Length=2855409 Score = 318 bits (352), Expect = 7e-82 Identities = 391/528 (74%), Gaps = 6/528 (1%) Strand=Plus/Plus Query 165323 TGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGT-GCAAACTTTCTTA-CTGCGG 165380 |||||||| || || ||||| ||||||||| |||| ||| |||| ||||||| |||| | Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCG 2853953 Query 165381 CAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGG 165440 ||||||| ||||| || | | | | |||||| | || | || ||||||||||| | Sbjct 2853954 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAG 2854013 Query 165441 CTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCC 165500 | ||||| ||||| | ||| ||| | ||||| || ||| ||||||| || |||| Sbjct 2854014 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCC 2854073 Query 165501 ACGGGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATC 165559 |||| ||||||| ||||| ||||||||| | ||||| || || | || || ||| || Sbjct 2854074 ACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTC 2854133 Query 165560 GGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTC 165619 | | || || || ||||| || || ||||||||||| || |||||||||||| || Sbjct 2854134 AAT-TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTA 2854192 Query 165620 TTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCA 165679 || | || || || || ||||| || ||||||| || || || ||| || || ||| Sbjct 2854193 TTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCA 2854252 Query 165680 GCAATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTT 165739 || || || | ||| | ||||| | ||||| || ||||| ||||| ||||| || ||| Sbjct 2854253 GCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTT 2854312 Query 165740 CATATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTT 165799 ||||||||||| ||||| ||| | |||| | ||| ||||| | || || ||||||| | Sbjct 2854313 CATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCT 2854372 Query 165800 ACAGTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTC 165847 || ||||| |||||| | | | |||| ||||| | ||||||||| ||| Sbjct 2854373 ACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 2854420 >seq1564 Length=1404973 Score = 264 bits (292), Expect = 1e-65 Identities = 290/383 (76%), Gaps = 2/383 (1%) Strand=Plus/Minus Query 163825 TTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACCATCTGT-TTCATC 163883 |||| ||||| || ||| ||||||||||||| | | | ||||| ||||| || || Sbjct 141181 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATT 141123 Query 163884 GTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGT 163943 | |||||| | |||||||| || || || || ||||||||||||||||||||| | || Sbjct 141122 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 141063 Query 163944 TCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATT 164003 || || | || || ||||| || ||||||||||| || |||| | || || || Sbjct 141062 TCTCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATA 141003 Query 164004 GGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGT 164063 || | ||||| ||||| ||||||||||| |||||| ||||||||||| | |||||||| Sbjct 141002 AGTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGC 140943 Query 164064 GGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGT 164123 ||||||| |||| | || | |||||| | | ||| | | |||||||||||| Sbjct 140942 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGT 140883 Query 164124 GAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCA 164183 ||||||||||| || |||||| |||||||| ||||||||| |||||| ||||| || Sbjct 140882 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCT 140823 Query 164184 CCCGTTGCAGCAGCATCCGCAGT 164206 || |||||||| || ||||||| Sbjct 140822 CCTGTTGCAGCTGCTACCGCAGT 140800 >seq2653 Length=4899193 Score = 248 bits (274), Expect = 1e-60 Identities = 289/390 (74%), Gaps = 9/390 (2%) Strand=Plus/Plus Query 164158 CTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCT 164217 |||||||| |||||| ||||| || || |||||||| || ||||||| ||| || ||| Sbjct 3225432 CTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCT 3225491 Query 164218 ATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCA 164277 | || ||||||| || || ||||| | ||||| || || |||||||| || |||| Sbjct 3225492 ACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCA 3225551 Query 164278 ACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGA--------TGCACCCCTTCCA 164329 | | |||| | || ||||| || |||||||||| || | ||||||| || || Sbjct 3225552 ATT-CATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCA 3225610 Query 164330 TATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCT 164389 |||| | ||||| ||||| ||||| ||||| || || |||||||| ||||| ||||| | Sbjct 3225611 TATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTT 3225670 Query 164390 GGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAA 164449 ||| |||||| || | |||||||| |||| ||| | ||| | ||||||| Sbjct 3225671 GGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAG 3225730 Query 164450 GTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCT 164509 || |||||||| |||||||| || || || || || ||||| ||||| ||||| || | Sbjct 3225731 ATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATT 3225790 Query 164510 GATCTTCCAATACGCTTCATTCAACAACTC 164539 |||||| ||||| ||| ||||||||||| Sbjct 3225791 GATCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq3417 Length=265768 Score = 241 bits (266), Expect = 1e-58 Identities = 244/318 (77%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 164454 GGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATC 164513 |||||||| ||| |||| || || || || || ||||| ||| ||||| || ||||| Sbjct 156208 GGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGATC 156149 Query 164514 TTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCT 164573 |||||||| ||| ||||||||||| ||||| || ||||||||| | ||||| |||||| Sbjct 156148 TTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCT 156089 Query 164574 GTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGT 164633 || || || ||||||||||| || | ||| | ||| |||||||||||||| || ||| Sbjct 156088 GTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATGGT 156029 Query 164634 TTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGAC 164693 | || |||||||| ||| | | ||| | || || || || | || |||||||| || Sbjct 156028 TGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTGAT 155969 Query 164694 GTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTC 164753 | | ||||| ||| || ||||||||||||||||| || ||||| ||||| |||||| Sbjct 155968 ATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 155909 Query 164754 CCTCTGGATCTCGCTGCT 164771 ||||| || || |||||| Sbjct 155908 CCTCTAGACCTAGCTGCT 155891 >seq2647 Length=4788780 Score = 235 bits (260), Expect = 6e-57 Identities = 282/382 (74%), Gaps = 1/382 (0%) Strand=Plus/Minus Query 164215 TCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCT 164274 |||| || |||| || || || ||||| | ||||| || || |||||| | || | Sbjct 734471 TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTACTT 734412 Query 164275 TCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGC 164334 |||| | |||| | || ||||| | ||||||||||| || |||||||| ||||||||| Sbjct 734411 TCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCATTCCATATGA 734352 Query 164335 TCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTA 164394 | ||||| ||| | ||||| ||||| || || ||||||| ||||| ||||| |||| | Sbjct 734351 TAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAA 734292 Query 164395 CTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTG 164454 |||| || | | ||||||| ||| ||| || ||| | |||||||| || | Sbjct 734291 TTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGGTTACAAATTCG 734232 Query 164455 GTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCT 164514 ||||||| |||| | | || || || || | | ||| ||||| ||||| || |||||| Sbjct 734231 GTCAAGAGGAAG-ACCTTATAATATCGTAGTTGTTCATGGTTATTTTGGCCGATTGATCT 734173 Query 164515 TCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTG 164574 || |||| ||| ||||||||||| ||||| || ||||||||| | ||||| |||| || Sbjct 734172 TCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCTTG 734113 Query 164575 TTGTTGGCATCTGGTTCACCGC 164596 | | || ||||||||||| || Sbjct 734112 TAGCAGGTATCTGGTTCACTGC 734091 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 164610 ACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGT 164669 || |||||||||||||| ||||||||||| |||||||| || | || ||| |||| || Sbjct 733756 ACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAAGGC 733697 Query 164670 CGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATG 164729 ||||| | || |||||||| || | | |||| ||| || ||||||||||||||| Sbjct 733696 CGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTTATG 733637 Query 164730 CACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTG 164769 || || |||| |||| ||||||||||| || || |||| Sbjct 733636 CATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGCTG 733597 >seq2833 Length=2661255 Score = 165 bits (182), Expect = 9e-36 Identities = 242/336 (72%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 165515 CTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGTATCCGTCCCTA 165573 ||||| |||| |||| | ||||| || || | || || ||| || | | || || || Sbjct 1209154 CTAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT-TGCGGCCTTA 1209212 Query 165574 CAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCC 165633 |||| || || ||||||||| | || |||||||||||| || || | || || || Sbjct 1209213 TAATGTCATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCC 1209272 Query 165634 TCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCAGGTT 165693 || ||||| || ||||||| || || | ||| || || ||||| || || | || Sbjct 1209273 GCTAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGATT 1209332 Query 165694 CCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATATGATGGGTGT 165753 | | || || | ||||| || ||||| ||||| ||||| || |||||||||||||| || Sbjct 1209333 CATCCTTTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGT 1209392 Query 165754 TG-CAG-GTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAAT 165811 || ||| |||| |||| | ||| ||| | | || || ||||||| ||| ||| | ||| Sbjct 1209393 TGTCAGTGTAT--TGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAAT 1209450 Query 165812 ACTCTGTATCAAGATGGTGACGATGCAAATACTTTC 165847 ||| | | | |||| ||||| | ||||||||| ||| Sbjct 1209451 ACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 1209486 >seq1029 Length=16155 Score = 107 bits (118), Expect = 2e-18 Identities = 253/373 (68%), Gaps = 8/373 (2%) Strand=Plus/Minus Query 165412 TTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTT-CGTCAGGTGGA-TCCAA 165469 |||| | || | ||||||||||||| || | || | ||| | || | ||| ||| Sbjct 11957 TTCTTTGTTGTTCCTCTGGGGTCCTGCCGCCCCCGGCGCTTTTCCTC-GTTGGTGTCC-- 11901 Query 165470 CTT-GGGGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGTTTCAT 165528 ||| ||||| || ||| ||||||| || |||| ||| ||||||| || | |||||| | Sbjct 11900 CTTCGGGGGTCTGTGGCCTTTTGTTGCTCTCCCCGGCGCTTTCGGCCTCCTCGGTTTCCT 11841 Query 165529 GCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGT 165587 | | |||| || | | || || ||| || | | || || | ||| | || | Sbjct 11840 GTTCCGTCCCTTCGCGCTTGCTCGCTCTGTTCCCT-TGCGGCCTTCTCCTGCCCTCGCCT 11782 Query 165588 TCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGA 165647 |||||||||| | |||||||||||| ||||| | | | || || |||| || Sbjct 11781 TCTCTGGTCCCCTTGCTGTTTTTGTTTCTGTCTTCTTGCTTTCTCCGCTCGGTCCGTCTG 11722 Query 165648 GTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCAGGTTCCTTCTCTTCCTAC 165707 ||||||| || || || ||| || ||||| || |||| | ||||| ||||| | | Sbjct 11721 GTTGGTTCTTTGCGCCTCGTTTTGGTGTCGCCGCTCTCTTTCGCTTCCTCCTCTTTTTTC 11662 Query 165708 AAGGATTCCATAACTGGACCTTGAATCCCTTTCATATGATGGGTGTTGCAGGTATCCTGG 165767 || || | | ||| ||||| ||||||| | || |||| ||||| ||| || ||| Sbjct 11661 CCGGGTTTCCTCCTTGGCCCTTGCCCCCCTTTCCTCTGCTGGGCGTTGCCGGTGTCTTGG 11602 Query 165768 GTGGTGCATTGCT 165780 | | ||| ||||| Sbjct 11601 GCGCTGCCTTGCT 11589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556901005387920