Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3418 513 2e-140 seq2762 358 8e-94 seq3417 190 2e-43 seq2653 190 2e-43 seq684 190 2e-43 seq2647 176 5e-39 seq1564 154 2e-32 seq2818 125 8e-24 seq2833 109 6e-19 seq1303 95.1 1e-14 >seq3418 Length=161897 Score = 513 bits (568), Expect = 2e-140 Identities = 706/987 (72%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| | Sbjct 1559 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1500 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| ||| | || ||| | | || || | || |||||||| || ||| Sbjct 1499 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATAGCCTTCATTGCTGCTCCT 1440 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | ||||| ||| | || ||| | | || || ||||| Sbjct 1439 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACAAT 1380 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || ||||||||||| || |||| | || || |||||| | ||||| ||||| || Sbjct 1379 ATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAGGTTTACACTTTTACCCAATT 1320 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| ||||| || ||||||||| | | | | Sbjct 1319 TGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 1260 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | |||||||| | |||||||||| | | | Sbjct 1259 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1200 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 | |||||| | || ||||| ||| ||||| ||||| ||||| |||| || || Sbjct 1199 CTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCA 1140 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || ||| |||||||||| || |||||||||||||| ||||| ||| Sbjct 1139 GTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 1080 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| ||||| || ||| | || ||||| || ||||| |||||||| ||||| || Sbjct 1079 TCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 1020 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || || ||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 1019 TTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 960 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || || ||| ||||| ||| | || Sbjct 959 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGT 900 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 |||| ||||| ||||| |||||||| || || || ||||| || || ||||| ||||| Sbjct 899 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGC 840 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | ||||||||| |||| Sbjct 839 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCT 780 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| || | ||||| || || | |||||| | || |||||||||||| Sbjct 779 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAAC 720 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 || ||||||||||| ||||||||||| || || ||| | | || | || ||| Sbjct 719 CTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATACT 660 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| | ||||| | || ||||| ||||||||||||||||||||| | ||||| Sbjct 659 TGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 600 Query 172780 CACAACTTCCCATTAGACCTTGCTTCT 172806 || |||||||| ||||||| ||| || Sbjct 599 CATAACTTCCCTCTAGACCTAGCTGCT 573 Score = 372 bits (412), Expect = 4e-98 Identities = 703/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| | | || ||||||||| ||| || |||||||| || | || ||||| ||| Sbjct 34461 TTTGATACTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGT 34520 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | || | || ||||||||| || || ||||| Sbjct 34521 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTT 34580 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | ||||| || || ||| Sbjct 34581 GTAACTTCATGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTA 34640 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || |||| | | | ||| | | |||| || ||||| Sbjct 34641 ACTGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 34700 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 |||||||||||||| || ||||||| ||| | || || || |||| ||||| Sbjct 34701 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTT 34760 Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310 || | || || | || ||||| |||||||||||| | ||||| || ||| | || || Sbjct 34761 GCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGA 34820 Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370 ||| | | ||||| || || |||||||||||| | || || || || | Sbjct 34821 TCTGTTCAATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 34880 Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430 | || || || || || ||||| ||| |||||||||| || ||| || ||| Sbjct 34881 TCTGTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 34940 Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490 || ||||| || ||||| | ||| | || | ||||| || || || |||||||| Sbjct 34941 GTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAAC 35000 Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550 |||||||| |||||||| ||||| || || | || | || || ||||| || |||||| Sbjct 35001 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCAT 35060 Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610 ||||| || || | || || || | ||||||| ||| ||| Sbjct 35061 GGTGCTACCGTAGAAAATACTTTATTTGAAGAC------------GGTGATGGT------ 35102 Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670 | | || ||| | || ||| | || || || |||||||||||| ||| || Sbjct 35103 ---GCAAATACATTCCGCGCTTTTAACCCAACTCAATCTGAAGAAACTTATTCAATGGTT 35159 Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730 || || ||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 35160 ACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 35219 Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790 || ||| | ||||| || ||||| || | ||| | |||| | | || | || Sbjct 35220 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 35279 Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850 ||||| || || ||||| | || || ||||| || |||||||| || | ||||| ||| Sbjct 35280 GGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATTCGGGCAGCGGAA 35339 Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910 ||||| || || || ||||||||||| || ||||| || | || |||||||| | || Sbjct 35340 GATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCT 35399 Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970 |||||| | || |||||| || ||||| ||| | |||| || || || || ||||| Sbjct 35400 TGGATGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 35459 Query 173971 AGAGGTAACGCACTTTAA 173988 | || ||||| |||||| Sbjct 35460 CGTGGAAACGCTCTTTAA 35477 >seq2762 Length=458829 Score = 358 bits (396), Expect = 8e-94 Identities = 703/1039 (68%), Gaps = 24/1039 (2%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| | | || ||||||||| ||| || |||||||| || | || ||||| ||| Sbjct 61315 TTTGATACTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGT 61256 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | || | || ||||||||| || || ||||| Sbjct 61255 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTT 61196 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | ||||| || || ||| Sbjct 61195 GTAACTTCATGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTA 61136 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || |||| | | | ||| | | |||| || ||||| Sbjct 61135 ACTGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 61076 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 |||||||||||||| || ||||||| ||| | || || || |||| ||||| Sbjct 61075 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTT 61016 Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310 || | || || | || ||||| |||||||||||| | ||||| || ||| | || || Sbjct 61015 GCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGA 60956 Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370 ||| | | | ||| || || |||||||||||| | || || || || | Sbjct 60955 TCTGTTCAATTGCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 60896 Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430 | || || || || || ||||| ||| |||||||||| || ||| || ||| Sbjct 60895 TCTGTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 60836 Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490 || ||||| || ||||| | ||| | || | ||||| || || || |||||||| Sbjct 60835 GTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAAC 60776 Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550 ||||||| |||||||| ||||| || || | || | || || ||||| || |||||| Sbjct 60775 TCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCAT 60716 Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610 ||||| || || | || || || | ||||||| ||| ||| Sbjct 60715 GGTGCTACCGTAGAAAATACTTTATTTGAAGAC------------GGTGATGGT------ 60674 Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670 | | || ||| | || ||| | || || || |||||||||||| ||| || Sbjct 60673 ---GCAAATACATTCCGCGCTTTTAACCCAACTCAATCTGAAGAAACTTATTCAATGGTT 60617 Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730 || || ||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 60616 ACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 60557 Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGA-CATCATCCATAGGTATCGT 173789 || ||| | ||||| || ||||| || | ||| | |||| | | | | || | || Sbjct 60556 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGTTC-TTGGAGTAGT 60498 Query 173790 AGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGA 173849 ||||| || || ||||| | || || ||||| || |||||||| || | ||||| || Sbjct 60497 CGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAAT-CGGGCAGCGGA 60439 Query 173850 AGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGC 173909 |||||| || || || ||||||||||| || ||||| || | || |||||||| | || Sbjct 60438 AGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGC 60379 Query 173910 ATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACC 173969 |||||| | || |||||| || ||||| ||| | |||| || || || || |||| Sbjct 60378 TTGGATGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 60319 Query 173970 AAGAGGTAACGCACTTTAA 173988 | | || ||||| |||||| Sbjct 60318 ACGTGGAAACGCTCTTTAA 60300 >seq3417 Length=265768 Score = 190 bits (210), Expect = 2e-43 Identities = 238/325 (73%), Gaps = 10/325 (3%) Strand=Plus/Minus Query 172487 TCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTA 172546 |||| ||||| ||| |||| || || || ||||| || || ||| ||||| || | | Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 172547 TCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCC 172606 ||||||| |||||| |||||||||||| | | ||||||||| |||| | || | Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 172607 CTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACG 172666 |||| || || | ||||| || || | |||||| | || |||||||||||||| || | Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 172667 GTTTCAACTTCAACCAATCAGTTGTAGAT-GCTAACG----GTAAGATTGTTCCTACATG 172721 ||| || ||||||||||| || || ||| || || | |||| || || || Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAA-----TTAAGACTTG 155976 Query 172722 GGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACA 172781 || ||| | ||||| | || ||||| ||||||||||||||||||||| | ||||| || Sbjct 155975 GGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 155916 Query 172782 CAACTTCCCATTAGACCTTGCTTCT 172806 |||||||| ||||||| ||| || Sbjct 155915 TAACTTCCCTCTAGACCTAGCTGCT 155891 >seq2653 Length=4899193 Score = 190 bits (210), Expect = 2e-43 Identities = 275/388 (71%), Gaps = 9/388 (2%) Strand=Plus/Plus Query 172195 TGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTAT 172254 ||||| ||| ||||| ||||| ||||| |||| || || || ||| | | || Sbjct 3225434 TGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTAC 3225493 Query 172255 CCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAAC 172314 ||| |||||||||| || |||||||||||||| ||||| ||||| ||||| ||||| Sbjct 3225494 CCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAA- 3225552 Query 172315 TTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAA--------TGCATCCTTTCCACA 172366 || ||| | || ||||| || |||| |||||||| | |||| || || || | Sbjct 3225553 TTCATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCATA 3225612 Query 172367 TGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAG 172426 || ||| ||||| || | || || || || ||||| || ||||| ||||| || | Sbjct 3225613 TGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGG 3225672 Query 172427 TTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGT 172486 | || ||| | | |||| || || || ||| |||| ||| | || |||| | Sbjct 3225673 TAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAGAT 3225732 Query 172487 TCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTA 172546 |||| ||||| |||||||| || || || ||||| || || ||||| ||||| || | | Sbjct 3225733 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 3225792 Query 172547 TCTTCCAGTATGCTTCTTTCAACAACTC 172574 |||| || |||||| |||||||||||| Sbjct 3225793 TCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq684 Length=2855409 Score = 190 bits (210), Expect = 2e-43 Identities = 353/518 (68%), Gaps = 0/518 (0%) Strand=Plus/Plus Query 173066 CCTTCGTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACT 173125 |||| || || ||||||||||| ||||| | || ||| ||| | ||||| || | Sbjct 2853882 CCTTTGTAACTTCATGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATT 2853941 Query 173126 TTTTAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTT 173185 | ||||| || ||||| || || |||| | | | ||| | | |||| || | Sbjct 2853942 TCTTAACTGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTAT 2854001 Query 173186 GGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACT 173245 |||| |||||||||||||| || ||||||| ||| | || || || |||| | Sbjct 2854002 GGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTT 2854061 Query 173246 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCG 173305 |||| || | || || | || ||||| |||||||||||| | ||||| || ||| | | Sbjct 2854062 TTGTTGCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTG 2854121 Query 173306 CAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCT 173365 | || ||| | | ||||| || || |||||||||||| | || || || | Sbjct 2854122 CTCGATCTGTTCAATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTT 2854181 Query 173366 TCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCAT 173425 | | | || || || || || ||||| ||| |||||||||| || ||| | Sbjct 2854182 TTGTTTCTGTATTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTT 2854241 Query 173426 TCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACAT 173485 | ||||| ||||| || ||||| | ||| | || | ||||| || || || |||| Sbjct 2854242 TTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACAT 2854301 Query 173486 TGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCA 173545 |||| |||||||| |||||||| ||||| || || | || | || || ||||| || | Sbjct 2854302 TGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTA 2854361 Query 173546 TTCATGGTGCAACAGTGCAGAACACATTGTATGAAGAC 173583 |||||||||| || || | || || || | ||||||| Sbjct 2854362 TTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGAC 2854399 >seq2647 Length=4788780 Score = 176 bits (194), Expect = 5e-39 Identities = 283/404 (70%), Gaps = 2/404 (0%) Strand=Plus/Minus Query 172238 CTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTA 172297 |||| ||| || | || ||| |||| ||||| || |||||||||||||| ||||| | Sbjct 734482 CTGTTTTC-TTATCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 734424 Query 172298 TCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATC 172357 |||| |||| ||||| || ||| | || ||||| | ||||| |||||||| ||||| | Sbjct 734423 TCTCTAGTACTTTCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACC 734364 Query 172358 CTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACG 172417 | ||||| ||| ||| ||||| | | || || || || ||||| | ||||| | Sbjct 734363 CATTCCATATGATAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATG 734304 Query 172418 GTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACG 172477 |||| || || | ||| | | ||||| || || | || ||||| ||| | | Sbjct 734303 GTTCCTTGGTAATTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAG 734244 Query 172478 GATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTG 172537 | ||||| ||||| ||||| |||| | | || || || |||| | || ||||| |||| Sbjct 734243 GTTACAAATTCGGTCAAGAGGAAG-ACCTTATAATATCGTAGTTGTTCATGGTTATTTTG 734185 Query 172538 GTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 172597 | || | |||||| | |||||| |||||||||||| | | ||||||||| ||| Sbjct 734184 GCCGATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 734125 Query 172598 CAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATC 172641 | | || | ||| | | || | ||||| || || | |||||| Sbjct 734124 CTGCTTGGCTTGTAGCAGGTATCTGGTTCACTGCTTTAGGTATC 734081 Score = 118 bits (130), Expect = 1e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 172639 ATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCT 172698 ||| |||| |||||||||||||| ||||||||||| ||||||||||| || | ||| | Sbjct 733762 ATCAGTACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGT 733703 Query 172699 AACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAA 172758 | || | || ||| |||| ||| | ||||| || ||||| ||||||||| Sbjct 733702 CAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAA 733643 Query 172759 GTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCT 172803 |||||||||||| | ||||| | |||||||| ||||||| ||| Sbjct 733642 GTTATGCATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGCT 733598 >seq1564 Length=1404973 Score = 154 bits (170), Expect = 2e-32 Identities = 258/373 (69%), Gaps = 0/373 (0%) Strand=Plus/Minus Query 171860 TTGGTTGGTTCGGTGTACTCATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCG 171919 |||| ||||| ||||| | |||||||| ||| | || ||| | | || || Sbjct 141181 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTA 141122 Query 171920 TTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTT 171979 | || |||||||| || ||||| || ||||| || || || | ||||| ||| | || | Sbjct 141121 TAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGAT 141062 Query 171980 CTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAG 172039 || | | || || ||||| || ||||||||||| || |||| | || || ||| Sbjct 141061 CTCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAA 141002 Query 172040 GTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTG 172099 || | ||||| ||||| || |||||||| ||| |||| ||||||||||| ||||| || | Sbjct 141001 GTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCG 140942 Query 172100 GTCCTTATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGAC 172159 |||||||| | | | | | |||||| | | ||| | | |||||||| | Sbjct 140941 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTG 140882 Query 172160 AGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCAC 172219 |||||||||| | | | | |||||| | || ||||| ||| ||||| ||||| | Sbjct 140881 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTC 140822 Query 172220 CTGTATCAGCAGC 172232 |||| |||| || Sbjct 140821 CTGTTGCAGCTGC 140809 >seq2818 Length=3145313 Score = 125 bits (138), Expect = 8e-24 Identities = 152/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 || ||||||||| |||||||||| || ||||||||||||||||| ||||| || ||| | Sbjct 1205820 CAGAGGTTTGGTGTTCCTATGGGTTATGGAGGTCCTCATGCTGCTTTCTTGGCCACATCC 1205761 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGCGAAG 158560 | |||| ||||||| ||| || || |||||| | ||| |||||| ||| | | Sbjct 1205760 CAAGAGTACAAGAGAATGATGCCCGGGAGAATTATTGGT--GTCAGTGTTGATTCCTCGG 1205703 Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620 | || || || | ||| | |||||||| |||||||||||| |||| || || | Sbjct 1205702 GGAACCCTGCTCTGCGAATGGCAATGCAGACTAGGGAGCAGCATATCCGAAGGGATAAGG 1205643 Query 158621 CAACCAGTAACATCTGCACAGCACA 158645 |||| || ||||| ||||| || || Sbjct 1205642 CAACAAGCAACATTTGCACTGCTCA 1205618 >seq2833 Length=2661255 Score = 109 bits (120), Expect = 6e-19 Identities = 213/315 (68%), Gaps = 0/315 (0%) Strand=Plus/Plus Query 173269 GGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGACTTGTAGGCATCAGACCT 173328 ||||| ||||||| |||| | ||||| || ||| | || || ||| | | ||| Sbjct 1209151 GGACTAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTGCGGCCT 1209210 Query 173329 TACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACTAGCATCTTTTTAATCTAC 173388 || || | |||||||||||| | || || || || | | || || || || Sbjct 1209211 TATAATGTCATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTAT 1209270 Query 173389 CCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCAGCAATCTTTCGT 173448 || ||||| ||| |||||||||| || | | || ||||| ||||| || ||||| Sbjct 1209271 CCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGA 1209330 Query 173449 TATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTTCACATGATGGGT 173508 | ||| | || | ||||| || || || |||||||| |||||||| |||||||| Sbjct 1209331 TTCATCCTTTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGA 1209390 Query 173509 GTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCAACAGTGCAGAAC 173568 |||| | || | || | || || |||| || ||||||||||| || || | || Sbjct 1209391 GTTGTCAGTGTATTGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAAT 1209450 Query 173569 ACATTGTATGAAGAC 173583 || || | ||||||| Sbjct 1209451 ACTTTATTTGAAGAC 1209465 >seq1303 Length=964456 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 157912 CCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCC 157971 |||||||| || | ||||| | | || || || | |||||||| ||||| || Sbjct 90302 CCCCCAGTAATCCTAAGAAACATCATGGAAAACCCCGGCTGGTACACCCAATACACCCCA 90361 Query 157972 TATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATC 158031 || || || ||||| || ||||| | ||||| | | | |||| ||| || | || Sbjct 90362 TACCAGGCCGAGATCTCCCAGGGCCGCCTGGAATCCCTGCTAAATTTCCAGACCATGATT 90421 Query 158032 ACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCA 158091 ||||| |||||||| || || || | ||||| ||||||||||| |||| || || ||| Sbjct 90422 ACAGACCTCACAGGTCTCCCCATGTCCAACGCCTCTCTATTAGACGAAGGCACCGCCGCA 90481 Query 158092 GCAGAAGCAATG 158103 || || |||||| Sbjct 90482 GCTGAGGCAATG 90493 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 |||||| ||||| || |||||||| | || ||||||||||| ||||| || || || || Sbjct 94504 TGGTGCCGATGTTTGCCATCTAAATCTCCACAAGACATTCTGCATTCCTCACGGTGGAGG 94563 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTTGTA 159804 ||||||||| | |||||||||||||| || ||| | |||||||| || Sbjct 94564 CGGTCCTGGCATGGGTCCTATTGGTGTGAAGAAGCATTTGGCACCATTTTTA 94615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588026075512480