Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq3418 639 2e-178 seq2762 590 7e-164 seq684 331 1e-85 seq2647 253 2e-62 seq2653 248 1e-60 seq1564 232 7e-56 seq3417 174 2e-38 seq2833 172 6e-38 seq1029 109 6e-19 >seq3418 Length=161897 Score = 639 bits (708), Expect = 2e-178 Identities = 725/979 (74%), Gaps = 2/979 (0%) Strand=Plus/Minus Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156 ||| | ||||||||| | |||||||| || | || ||||| || ||| ||||||||||| Sbjct 1550 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1491 Query 167157 ACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215 || || | | ||||| ||||| || || || |||||| | | ||||||||| || || Sbjct 1490 ACTTTATTGACCGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTCCTCCAGTAGA 1432 Query 167216 CATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 167275 || |||||||| || ||||| ||| |||| || || | || || ||||| || ||||| Sbjct 1431 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACAATATTATCTC 1372 Query 167276 TGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGC 167335 |||||| || |||| ||||| ||||| ||| | ||||| || || || |||||||| Sbjct 1371 TGGTGCTATTATTCCGACTTCTGCAGCTATAGGTTTACACTTTTACCCAATTTGGGAAGC 1312 Query 167336 AGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTT 167395 ||| || | || || ||||| ||||| || ||||||| |||| | ||| | ||||| Sbjct 1311 GGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTT 1252 Query 167396 CCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 167455 | | |||| | | || |||||||||||||||||||| || |||||| ||||| Sbjct 1251 CTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 1192 Query 167456 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 167515 ||| || ||||| |||||||||||| ||||| || || || || | || || ||| | Sbjct 1191 GCGCCCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTT 1132 Query 167516 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTAC 167575 |||| || ||||||| || ||| ||||| | |||||||| || ||||||||||| Sbjct 1131 GATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 1072 Query 167576 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 167635 ||||| | |||| |||| ||||| || ||||||||||| || |||||||| || ||||| Sbjct 1071 TTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCATAT 1012 Query 167636 GCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 167695 | | ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| |||| Sbjct 1011 GTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 952 Query 167696 TACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTT 167755 || ||| || | | |||||||| |||| ||| || ||| | ||||||| || Sbjct 951 AACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATT 892 Query 167756 CGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGAT 167815 |||||| || ||||| || ||||| ||||| |||||||||||||| || || || |||| Sbjct 891 CGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGAT 832 Query 167816 CTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCC 167875 ||||||||| || ||||||||||| || ||| | ||||||||||| || || ||||| Sbjct 831 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCC 772 Query 167876 TGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGG 167935 ||| || |||||||||| ||||||||| ||||| Sbjct 771 TGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAACGG 712 Query 167936 TTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGA 167995 |||||| |||||||| || | |||||||| || || | ||||||||| || Sbjct 711 TTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGA 652 Query 167996 CGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTT 168055 | | ||||||||| || ||||||||||||||||| || ||||||||||| ||||| Sbjct 651 TATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTT 592 Query 168056 CCCTCTCGACCTTGCTGCT 168074 |||||| ||||| |||||| Sbjct 591 CCCTCTAGACCTAGCTGCT 573 Score = 603 bits (668), Expect = 1e-167 Identities = 740/1004 (74%), Gaps = 6/1004 (1%) Strand=Plus/Plus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| |||||||||||||| || ||||| || || | || ||| Sbjct 34473 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 34532 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||| ||| | ||| | || |||||| | || || || | || || || ||| Sbjct 34533 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 34592 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672 ||||| || || ||||| ||||||||| |||| || |||| ||||||| |||| |||| Sbjct 34593 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAG 34650 Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732 || ||||| || || | | | |||||| | || | || ||||||||||| |||| Sbjct 34651 TTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 34710 Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792 |||| ||||| | ||||||||| | || || || ||| ||||||| || ||||||| Sbjct 34711 AAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACG 34770 Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851 | ||||||| ||||| ||||||||| | ||||| || || || || || ||| || | Sbjct 34771 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT 34830 Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911 | || || || ||||| || || ||||||||||| || |||||||||||| || || Sbjct 34831 -TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 34889 Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971 | || || || || ||||| || ||||||| || || || ||| || || |||| Sbjct 34890 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 34949 Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031 || || |||||| | ||||| | ||||| || ||||| |||||| |||| ||||||||| Sbjct 34950 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 35009 Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091 |||||||| || || ||| | ||||| | |||||||| | || |||||||||| ||| Sbjct 35010 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 35069 Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGC 169151 ||||| |||||| | | | |||| ||||| |||||||| ||| || ||| || Sbjct 35070 GTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCA 35129 Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211 ||||| || || || ||||||||||||||||| ||||| || ||||| || |||||| Sbjct 35130 ACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTT 35189 Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271 || |||| || ||||| | ||||| |||||||||||| | ||||| || || | Sbjct 35190 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 35249 Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331 ||| | |||| ||| | | || | | ||||| || || ||||| ||||| |||||| Sbjct 35250 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 35309 Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391 || ||||| ||||| || | ||||| |||||||| || ||||| || ||||||||||| Sbjct 35310 TTCGTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAA 35369 Query 169392 AACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAG 169451 || || ||||| ||||||||| ||||||| ||| | || || ||||| |||||||| Sbjct 35370 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAA 35429 Query 169452 AACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 ||| || | ||||||||||| || || || || || || || || Sbjct 35430 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 35473 >seq2762 Length=458829 Score = 590 bits (654), Expect = 7e-164 Identities = 738/1004 (74%), Gaps = 7/1004 (1%) Strand=Plus/Minus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| |||||||||||||| || ||||| || || | || ||| Sbjct 61303 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 61244 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||| ||| | ||| | || |||||| | || || || | || || || ||| Sbjct 61243 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 61184 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672 ||||| || || ||||| ||||||||| |||| || |||| ||||||| |||| |||| Sbjct 61183 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAG 61126 Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732 || ||||| || || | | | |||||| | || | || ||||||||||| |||| Sbjct 61125 TTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 61066 Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792 |||| ||||| | ||||||||| | || || || ||| ||||||| || ||||||| Sbjct 61065 AAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACG 61006 Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851 | ||||||| ||||| ||||||||| | ||||| || || || || || ||| || | Sbjct 61005 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT 60946 Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911 | || | || ||||| || || ||||||||||| || |||||||||||| || || Sbjct 60945 -TGCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 60887 Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971 | || || || || ||||| || ||||||| || || || ||| || || |||| Sbjct 60886 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 60827 Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031 || || |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||| Sbjct 60826 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCAT 60767 Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091 |||||||| || || ||| | ||||| | |||||||| | || |||||||||| ||| Sbjct 60766 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 60707 Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGC 169151 ||||| |||||| | | | |||| ||||| |||||||| ||| || ||| || Sbjct 60706 GTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCA 60647 Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211 ||||| || || || ||||||||||||||||| ||||| || ||||| || |||||| Sbjct 60646 ACTCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTT 60587 Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271 || |||| || ||||| | ||||| |||||||||||| | ||||| || || | Sbjct 60586 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 60527 Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331 ||| | |||| ||| | || | | ||||| || || ||||| ||||| |||||| Sbjct 60526 GGTTTATGGATGAGTGTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 60467 Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391 || ||||| ||||| ||| | ||||| |||||||| || ||||| || ||||||||||| Sbjct 60466 TTCGTTTCTCAAGAAATC-GGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAA 60408 Query 169392 AACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAG 169451 || || ||||| ||||||||| ||||||| ||| | || || ||||| |||||||| Sbjct 60407 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAA 60348 Query 169452 AACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 ||| || | ||||||||||| || || || || || || || || Sbjct 60347 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 60304 >seq684 Length=2855409 Score = 331 bits (366), Expect = 1e-85 Identities = 394/528 (75%), Gaps = 6/528 (1%) Strand=Plus/Plus Query 168612 TGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGG 168669 |||||||| || || ||||| ||||||||| |||| || |||| ||||||| |||| | Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCG 2853953 Query 168670 CAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGG 168729 ||||| ||||| || || | | | |||||| | || | || ||||||||||| | Sbjct 2853954 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAG 2854013 Query 168730 CACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCC 168789 ||||||| ||||| | ||||||||| | || || || ||| ||||||| || |||| Sbjct 2854014 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCC 2854073 Query 168790 ACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATC 168848 |||| ||||||| ||||| ||||||||| | ||||| || || || || || ||| || Sbjct 2854074 ACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTC 2854133 Query 168849 GGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTC 168908 | | || || || ||||| || || ||||||||||| || |||||||||||| || Sbjct 2854134 AAT-TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTA 2854192 Query 168909 TTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCA 168968 || | || || || || ||||| || ||||||| || || || ||| || || || Sbjct 2854193 TTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCA 2854252 Query 168969 GCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTT 169028 || || || |||||| | ||||| | ||||| || ||||| |||||| |||| |||||| Sbjct 2854253 GCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTT 2854312 Query 169029 CATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTT 169088 ||||||||||| || || ||| | ||||| | |||||||| | || |||||||||| | Sbjct 2854313 CATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCT 2854372 Query 169089 ACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTC 169136 || ||||| |||||| | | | |||| ||||| |||||||| ||| Sbjct 2854373 ACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 2854420 >seq2647 Length=4788780 Score = 253 bits (280), Expect = 2e-62 Identities = 282/375 (75%), Gaps = 1/375 (0%) Strand=Plus/Minus Query 167518 TCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACAT 167577 |||| || |||| || || ||| ||||| | |||||||| || |||||| |||| | Sbjct 734471 TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTACTT 734412 Query 167578 TCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGC 167637 |||| | |||| |||| ||||| | ||||||||||| || |||||||| ||||||||| Sbjct 734411 TCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCATTCCATATGA 734352 Query 167638 TCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTA 167697 | ||||| ||| | ||||||||||| || || ||||||| ||||| ||||| |||| | Sbjct 734351 TAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAA 734292 Query 167698 CCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCG 167757 ||| || | | ||||||| ||| ||| || ||| | |||||||| |||| Sbjct 734291 TTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGGTTACAAATTCG 734232 Query 167758 GTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCT 167817 |||| || ||||| | ||||| ||||| | || ||||||||| || || || |||||| Sbjct 734231 GTCAAGAGGAAGA-CCTTATAATATCGTAGTTGTTCATGGTTATTTTGGCCGATTGATCT 734173 Query 167818 TCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTG 167877 || |||| || ||||||||||| || ||| | ||||||||||| || || |||| || Sbjct 734172 TCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCTTG 734113 Query 167878 TTGTTGGTATCTGGT 167892 | | |||||||||| Sbjct 734112 TAGCAGGTATCTGGT 734098 Score = 113 bits (124), Expect = 5e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 167921 ATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCT 167980 ||||||||| ||||||||||| |||||||| ||| | |||||||| || || | Sbjct 733748 ATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAAGGCCGTGTAAT 733689 Query 167981 GCCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCG 168040 ||||||||| || | | |||| |||| || ||||||||||||||||| || | Sbjct 733688 TAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTTATGCATGAATG 733629 Query 168041 TAATGCTCACAACTTCCCTCTCGACCTTGCTG 168072 |||||||| ||||||||||| ||||| |||| Sbjct 733628 TAATGCTCGTAACTTCCCTCTAGACCTAGCTG 733597 >seq2653 Length=4899193 Score = 248 bits (274), Expect = 1e-60 Identities = 288/388 (74%), Gaps = 9/388 (2%) Strand=Plus/Plus Query 167463 TGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTAT 167522 ||||| |||||||||||| ||||| || || || || | || || ||| | |||| Sbjct 3225434 TGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTAC 3225493 Query 167523 CCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAAC 167582 || ||||||| || ||| ||||| | |||||||| || ||||||||||| ||||| Sbjct 3225494 CCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAAT 3225553 Query 167583 TACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGA--------TGCACCCCTTCCATA 167634 | |||| |||| ||||| || |||||||||| || | ||||||| || |||| Sbjct 3225554 T-CATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCATA 3225612 Query 167635 TGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 167694 || | ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| ||| Sbjct 3225613 TGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGG 3225672 Query 167695 TTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGT 167754 | || ||| || | |||||||| |||| ||| | ||| | ||||||| | Sbjct 3225673 TAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAGAT 3225732 Query 167755 TCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGA 167814 ||||||| || ||||| || ||||| ||||| |||||||||||||| || || || ||| Sbjct 3225733 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 3225792 Query 167815 TCTTCCAATACGCATCCTTCAACAACTC 167842 |||| ||||| || ||||||||||| Sbjct 3225793 TCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq1564 Length=1404973 Score = 232 bits (256), Expect = 7e-56 Identities = 276/372 (74%), Gaps = 2/372 (1%) Strand=Plus/Minus Query 167130 GGTTGGTTCGGCGTTCTGATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCAT 167188 || ||||| || ||| ||||||||||||| || | | ||||| ||||| || || || Sbjct 141179 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 141121 Query 167189 CGCCTTCGTCGGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTC 167248 |||||| | | ||||||||| || || || |||||||| || ||||| ||| |||| || Sbjct 141120 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 141061 Query 167249 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGG 167308 || | || || ||||| || ||||||||||| || |||| ||||| ||||| | Sbjct 141060 TCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAAG 141001 Query 167309 TCTTCACTTCTATCCCATCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGG 167368 | | ||||| || || || |||||||| ||| || | || || ||||| ||||| || || Sbjct 141000 TTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGG 140941 Query 167369 TCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGA 167428 ||||| |||| | ||| | |||||| | |||| | | || ||||||||||| Sbjct 140940 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 140881 Query 167429 GTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCC 167488 ||||||||| || |||||| |||||||| || ||||| |||||||||||| ||||| Sbjct 140880 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCC 140821 Query 167489 AGTCGCTGCAGC 167500 || || || || Sbjct 140820 TGTTGCAGCTGC 140809 >seq3417 Length=265768 Score = 174 bits (192), Expect = 2e-38 Identities = 225/320 (70%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 167755 TCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGA 167814 ||||||| || ||| | || ||||| ||||| ||||||||| ||| || || || ||| Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 167815 TCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGC 167874 |||||||||| || ||||||||||| || ||| | ||||||||||| || || |||| Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 167875 CTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACG 167934 |||| || |||||||||| ||||||||| || | Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 167935 GTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAG 167994 ||| || |||||||| || | ||||||| || || | |||||||| | Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTG 155971 Query 167995 ACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACT 168054 | | | ||||||||| || ||||||||||||||||| || ||||||||||| |||| Sbjct 155970 ATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 155911 Query 168055 TCCCTCTCGACCTTGCTGCT 168074 ||||||| ||||| |||||| Sbjct 155910 TCCCTCTAGACCTAGCTGCT 155891 >seq2833 Length=2661255 Score = 172 bits (190), Expect = 6e-38 Identities = 240/334 (72%), Gaps = 2/334 (1%) Strand=Plus/Plus Query 168804 CTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTA 168862 ||||| |||| |||| | ||||| || || || || || ||| || | | || || || Sbjct 1209154 CTAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT-TGCGGCCTTA 1209212 Query 168863 CAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCC 168922 |||| || || ||||||||| | || |||||||||||| || || | || || || Sbjct 1209213 TAATGTCATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCC 1209272 Query 168923 TCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATT 168982 || ||||| || ||||||| || || | ||| || || |||| || || ||||| Sbjct 1209273 GCTAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGATT 1209332 Query 168983 CCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATATGATGGGTGT 169042 | | || || | ||||| || ||||| |||||| |||| ||||||||||||||||| || Sbjct 1209333 CATCCTTTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGT 1209392 Query 169043 AGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATAC 169102 | || | ||||| | |||||| | | || |||||||||| ||| ||| | ||||| Sbjct 1209393 TGTCAGTGTATTGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAATAC 1209452 Query 169103 TCTGTATCAAGATGGTGAACAAGCAAATACTTTC 169136 | | | | |||| ||||| |||||||| ||| Sbjct 1209453 TTTATTTGAAGACGGTGATGGTGCAAATACATTC 1209486 >seq1029 Length=16155 Score = 109 bits (120), Expect = 6e-19 Identities = 260/388 (67%), Gaps = 4/388 (1%) Strand=Plus/Minus Query 168701 TTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAAGG-GGATTTCGTCAGATGGTGTCAAC 168759 |||| | || | ||||||||||||| || | || | |||| || | ||||||| Sbjct 11957 TTCTTTGTTGTTCCTCTGGGGTCCTGCCGCCCCCGGCGCTTTTCCTC-GTTGGTGTCCCT 11899 Query 168760 TTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGC 168819 | || || || ||| ||||||| || |||| ||| ||||||| || |||||||| || Sbjct 11898 TCGGGGGTCTGTGGCCTTTTGTTGCTCTCCCCGGCGCTTTCGGCCTCCTCGGTTTCCTGT 11839 Query 168820 TTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTC 168878 | |||| || | || || || ||| || | | || || | ||| | || ||| Sbjct 11838 TCCGTCCCTTCGCGCTTGCTCGCTCTGTTCCCT-TGCGGCCTTCTCCTGCCCTCGCCTTC 11780 Query 168879 TCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGT 168938 |||||||| | |||||||||||| ||||| | | | || || |||| || || Sbjct 11779 TCTGGTCCCCTTGCTGTTTTTGTTTCTGTCTTCTTGCTTTCTCCGCTCGGTCCGTCTGGT 11720 Query 168939 TGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAA 168998 ||||| || || || ||| || ||| | || |||| || ||||| ||||| | | Sbjct 11719 TGGTTCTTTGCGCCTCGTTTTGGTGTCGCCGCTCTCTTTCGCTTCCTCCTCTTTTTTCCC 11660 Query 168999 GGATTCCATAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGA 169058 || || | | ||| | || || |||| | || |||| || || ||| | ||||| Sbjct 11659 GGGTTTCCTCCTTGGCCCTTGCCCCCCTTTCCTCTGCTGGGCGTTGCCGGTGTCTTGGGC 11600 Query 169059 GGAGCCTTGCTTTCTGCCATTCATGGTG 169086 | |||||||| | || ||| ||||| Sbjct 11599 GCTGCCTTGCTCTGCGCTCTTCCTGGTG 11572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560584048023200