Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq3418 655 0.0 seq2762 567 9e-157 seq684 342 6e-89 seq3417 266 4e-66 seq2647 226 3e-54 seq2653 208 9e-49 seq1564 206 3e-48 seq2833 190 3e-43 seq1029 123 3e-23 seq2036 95.1 1e-14 >seq3418 Length=161897 Score = 655 bits (726), Expect = 0.0 Identities = 727/964 (75%), Gaps = 8/964 (1%) Strand=Plus/Minus Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880 || ||||| || | || ||||||||||| |||||||||| ||| | ||| | ||||| Sbjct 1532 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1473 Query 181881 ATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGA 181939 ||||| || || | || ||| | || || ||||| || ||||| || ||||| || || Sbjct 1472 -TCTGTATTTATTATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1414 Query 181940 ACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATC 181999 ||| || |||| || || | || || ||||| || |||||||||||| || | || | Sbjct 1413 ACCTGTTTCTGGATCTCTGCTTTACGGAAACAATATTATCTCTGGTGCTATTATTCCGAC 1354 Query 182000 CTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTG 182059 || || || ||| | ||||| |||||||| |||||||| || || ||||||| || Sbjct 1353 TTCTGCAGCTATAGGTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATG 1294 Query 182060 GCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC 182119 | | || ||||| ||||||| |||| ||||| | |||||| | | || | || || Sbjct 1293 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--TGTA-GC 1237 Query 182120 CT---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTG 182176 | ||||||| ||||||||||||||| || ||| | |||||||| || ||||| Sbjct 1236 TTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGC 1177 Query 182177 TGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGG 182236 ||| |||||||| ||||| || || || || | || || ||||| |||| || |||| Sbjct 1176 TGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGG 1117 Query 182237 TCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTT 182296 ||| || || || |||| ||||| || |||||||| || || ||||| | ||| | Sbjct 1116 TCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGAT 1057 Query 182297 GGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGG 182356 || ||||| ||||||||||||||||||||||| || || || ||||| || ||||| || Sbjct 1056 TGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCATATGTTAGGCGTAGCTGG 997 Query 182357 TGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGT 182416 ||||||||| || || || || ||||| ||||| ||||| ||||| || ||| | | Sbjct 996 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGAT 937 Query 182417 CCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGA 182476 | | || || || || | || || ||| | ||||||| ||||||||||| ||||| Sbjct 936 CAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAGGAAGA 877 Query 182477 GACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATC 182536 || ||||| ||||| || || ||||| || || || || |||||||||||||| || Sbjct 876 AACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 817 Query 182537 ATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTG 182596 ||||||||||| ||||| || ||||||||| | ||||| |||||||| || || ||||| Sbjct 816 TTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTG 757 Query 182597 GTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCA 182656 |||||| || | ||| || ||| |||||||||||||| ||||||||||| |||||||| Sbjct 756 GTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCA 697 Query 182657 GTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGC 182716 ||| | ||||| |||| || ||||| |||| |||||||| ||| | | |||||||| Sbjct 696 ATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGC 637 Query 182717 TGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGC 182776 | ||||||||||||||||||||||| ||||| || || |||||||| ||||| || || Sbjct 636 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 577 Query 182777 TGCT 182780 |||| Sbjct 576 TGCT 573 Score = 580 bits (642), Expect = 1e-160 Identities = 735/1008 (73%), Gaps = 2/1008 (0%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || || || || ||||| |||||||| || || | || || Sbjct 34473 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 34532 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 34533 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 34592 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTT-ACGGCAGCTGT 183371 |||||||||||| | ||| ||||||| | |||||| || |||||| || || || || Sbjct 34593 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACTGCCGCAGT 34651 Query 183372 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCA 183431 ||||| |||||| | | | | |||||| | ||||||| ||||||||||| | || Sbjct 34652 TTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACA 34711 Query 183432 AGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGG 183491 ||| || ||| || ||||| ||| | ||||| || |||| |||||| || |||||||| Sbjct 34712 AGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGG 34771 Query 183492 TGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTAT 183551 || || | || || ||||||||| | || || || || |||||||| | || | Sbjct 34772 CGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATT 34831 Query 183552 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCT 183611 || ||||| ||||| || || ||||||||||| |||||||||||||| ||||||| | Sbjct 34832 GCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTT 34891 Query 183612 TATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAAT 183671 || ||||| || ||||||||| ||||||||||| |||||||| || |||||||| || Sbjct 34892 GATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTAT 34951 Query 183672 CTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATAT 183731 ||| ||||| | | || |||| || || || || ||||| || ||||| || ||||| Sbjct 34952 ATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 35011 Query 183732 GATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGT 183791 |||||||||||| ||| || | || | || | || | ||||| ||||||| || || Sbjct 35012 GATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGT 35071 Query 183792 AGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCAC 183851 ||| ||||| || | |||||| || || ||||| |||||| || ||| | | || Sbjct 35072 AGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAAC 35131 Query 183852 TCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGG 183911 |||| ||||| || ||||| |||||||| || || || || ||||| |||||||| || Sbjct 35132 TCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGG 35191 Query 183912 GGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGG 183971 |||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | || Sbjct 35192 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 35251 Query 183972 TCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTT 184031 | | ||| | | || |||| | | || || || || || || ||||| ||||| || Sbjct 35252 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTT 35311 Query 184032 TGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAA 184091 || |||||| || | ||||| |||||||| |||||||| || |||||||| || || Sbjct 35312 CGTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAA 35371 Query 184092 CATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAA 184151 || || | || ||||| | ||||| ||| | || || ||||| || ||||| || Sbjct 35372 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAA 35431 Query 184152 TTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 35432 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 35479 >seq2762 Length=458829 Score = 567 bits (628), Expect = 9e-157 Identities = 733/1008 (73%), Gaps = 3/1008 (0%) Strand=Plus/Minus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || || || || ||||| |||||||| || || | || || Sbjct 61303 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 61244 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 61243 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 61184 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCTGT 183371 |||||||||||| | ||| ||||||| | |||||| || ||||||| | || || || Sbjct 61183 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACTGCCGCAGT 61125 Query 183372 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCA 183431 ||||| |||||| | | | | |||||| | ||||||| ||||||||||| | || Sbjct 61124 TTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACA 61065 Query 183432 AGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGG 183491 ||| || ||| || ||||| ||| | ||||| || |||| |||||| || |||||||| Sbjct 61064 AGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGG 61005 Query 183492 TGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTAT 183551 || || | || || ||||||||| | || || || || |||||||| | || | Sbjct 61004 CGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATT 60945 Query 183552 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCT 183611 || | ||| ||||| || || ||||||||||| |||||||||||||| ||||||| | Sbjct 60944 GCGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTT 60885 Query 183612 TATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAAT 183671 || ||||| || ||||||||| ||||||||||| |||||||| || |||||||| || Sbjct 60884 GATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTAT 60825 Query 183672 CTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATAT 183731 ||| ||||| | | || |||| || || || || ||||| || ||| | || ||||| Sbjct 60824 ATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCATAT 60765 Query 183732 GATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGT 183791 |||||||||||| ||| || | || | || | || | ||||| ||||||| || || Sbjct 60764 GATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGT 60705 Query 183792 AGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCAC 183851 ||| ||||| || | |||||| || || ||||| |||||| || ||| | | || Sbjct 60704 AGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAAC 60645 Query 183852 TCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGG 183911 |||| ||||| || ||||| |||||||| || || || || ||||| |||||||| || Sbjct 60644 TCAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGG 60585 Query 183912 GGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGG 183971 |||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | || Sbjct 60584 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 60525 Query 183972 TCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTT 184031 | | ||| | | | |||| | | || || || || || || ||||| ||||| || Sbjct 60524 TTTATGGATGAGTGTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTT 60465 Query 184032 TGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAA 184091 || |||||| ||| | ||||| |||||||| |||||||| || |||||||| || || Sbjct 60464 CGTTTCTCAAGAAATC-GGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAA 60406 Query 184092 CATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAA 184151 || || | || ||||| | ||||| ||| | || || ||||| || ||||| || Sbjct 60405 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAA 60346 Query 184152 TTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 60345 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 60298 >seq684 Length=2855409 Score = 342 bits (378), Expect = 6e-89 Identities = 393/526 (75%), Gaps = 2/526 (0%) Strand=Plus/Plus Query 183310 TGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTT-ACGGCAGC 183368 ||||||||||||||| | ||| ||||||| | |||||| || |||||| || || || Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACTGCCGC 2853954 Query 183369 TGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTC 183428 || ||||| |||||| | | | | |||||| | ||||||| ||||||||||| | Sbjct 2853955 AGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGC 2854014 Query 183429 TCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCA 183488 ||||| || ||| || ||||| ||| | ||||| || |||| |||||| || ||||| Sbjct 2854015 ACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCA 2854074 Query 183489 CGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGG 183548 ||| || || | || || ||||||||| | || || || || |||||||| | || Sbjct 2854075 CGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCA 2854134 Query 183549 TATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATT 183608 | || ||||| ||||| || || ||||||||||| |||||||||||||| |||||| Sbjct 2854135 ATTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATT 2854194 Query 183609 CCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGC 183668 | | || ||||| || ||||||||| ||||||||||| |||||||| || |||||||| Sbjct 2854195 CTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGC 2854254 Query 183669 AATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCA 183728 || ||| ||||| | | || |||| || || || || ||||| || ||||| || || Sbjct 2854255 TATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCA 2854314 Query 183729 TATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCAC 183788 ||||||||||||||| ||| || | || | || | || | ||||| ||||||| || Sbjct 2854315 TATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTAC 2854374 Query 183789 AGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTC 183834 ||||| ||||| || | |||||| || || ||||| |||||| Sbjct 2854375 CGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 2854420 >seq3417 Length=265768 Score = 266 bits (294), Expect = 4e-66 Identities = 251/320 (78%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 182461 TCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGA 182520 |||||||||| ||| | || ||||| ||||| || || ||| || || || || |||| Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 182521 TCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 182580 |||||||||| || ||||||||||| ||||| || ||||||||| | ||||| |||| Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 182581 CTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACG 182640 |||| || || ||||||||||| || | ||| || ||| |||||||||||||| || | Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 182641 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAG 182700 ||| || |||||||| ||| | ||||| | || || || || |||| |||||||| | Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTG 155971 Query 182701 ATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 182760 || | | ||||||||| ||||||||||||||||||||||| ||||| || || |||| Sbjct 155970 ATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 155911 Query 182761 TCCCACTAGATCTTGCTGCT 182780 |||| ||||| || |||||| Sbjct 155910 TCCCTCTAGACCTAGCTGCT 155891 >seq2647 Length=4788780 Score = 226 bits (250), Expect = 3e-54 Identities = 288/394 (73%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 182212 CTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAA 182271 |||| |||||| |||| || |||| || || || || |||| ||||| || |||| Sbjct 734482 CTGTTTTCTTA-TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 734424 Query 182272 TCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATC 182331 |||| | || ||||| | ||| | || ||||| | ||||||||||||||||||||| | Sbjct 734423 TCTCTAGTACTTTCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACC 734364 Query 182332 CCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACG 182391 | ||||| ||| | || ||||| |||||||||| || || || || |||| ||||| | Sbjct 734363 CATTCCATATGATAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATG 734304 Query 182392 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATG 182451 |||| ||||| | ||| | || | || || | | | || || ||| | | Sbjct 734303 GTTCCTTGGTAATTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAG 734244 Query 182452 GTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCG 182511 ||||||| ||||||||||| ||||| | ||||| ||||| | | ||||| || || | Sbjct 734243 GTTACAAATTCGGTCAAGAGGAAGA-CCTTATAATATCGTAGTTGTTCATGGTTATTTTG 734185 Query 182512 GTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 182571 | || ||||||||| |||| || ||||||||||| ||||| || ||||||||| | | Sbjct 734184 GCCGATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 734125 Query 182572 CTGCATGGCCTGTTGTTGGAATCTGGTTCACCGC 182605 |||| |||| ||| | || ||||||||||| || Sbjct 734124 CTGCTTGGCTTGTAGCAGGTATCTGGTTCACTGC 734091 Score = 145 bits (160), Expect = 9e-30 Identities = 128/160 (80%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 182619 ACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGT 182678 || |||||||||||||| ||||||||||| |||||||| || | ||||| |||| || Sbjct 733756 ACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAAGGC 733697 Query 182679 CGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATG 182738 ||||| |||| |||||||| ||| | | |||| |||| |||||||||||||||||| Sbjct 733696 CGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTTATG 733637 Query 182739 CATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCTG 182778 ||||| |||| || | |||||||| ||||| || |||| Sbjct 733636 CATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGCTG 733597 >seq2653 Length=4899193 Score = 208 bits (230), Expect = 9e-49 Identities = 279/388 (72%), Gaps = 9/388 (2%) Strand=Plus/Plus Query 182169 TGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTAT 182228 ||||| ||| |||||||| ||||| || || || || | || || ||||| |||| Sbjct 3225434 TGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTAC 3225493 Query 182229 CCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAAC 182288 || ||||||| || || || |||| ||||| || |||||||| || || ||||| Sbjct 3225494 CCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAAT 3225553 Query 182289 TATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTA--------TGCATCCCTTCCACA 182340 | ||| | || ||||| ||| ||||||||||||||| |||| || || || | Sbjct 3225554 TC-ATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCATA 3225612 Query 182341 TGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGG 182400 |||| || ||||| ||||||||||| || || || || ||||| ||||| ||||| |||| Sbjct 3225613 TGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGG 3225672 Query 182401 TTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGT 182460 | || ||| | || || || || || | || | ||| | ||||||| | Sbjct 3225673 TAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAGAT 3225732 Query 182461 TCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGA 182520 |||||||||| ||||| || ||||| ||||| || || ||||| || || || || |||| Sbjct 3225733 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 3225792 Query 182521 TCTTCCAATACGCATCATTCAACAACTC 182548 |||| ||||| || ||||||||||| Sbjct 3225793 TCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq1564 Length=1404973 Score = 206 bits (228), Expect = 3e-48 Identities = 274/375 (73%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 181836 GGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGT 181894 || ||||||||||| |||||||||| ||| | ||| | ||||| ||||| || || | Sbjct 141179 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 141121 Query 181895 TGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTC 181954 || ||| | || || ||||| || ||||| || ||||| || ||||| || |||| || Sbjct 141120 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 141061 Query 181955 ACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGG 182014 || | || || ||||| || |||||||||||| || | || | || || || | Sbjct 141060 TCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAAG 141001 Query 182015 TCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGG 182074 | | ||||| |||||||| |||||||| || || ||||||| ||| | || ||||| || Sbjct 141000 TTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGG 140941 Query 182075 TCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC---CTACATGGGACG 182131 ||||| |||| ||||| | |||||| | | || | || || |||||||| || Sbjct 140940 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--TGTA-GCTTGTTACATGGGTCG 140884 Query 182132 TGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGC 182191 ||||||||||||| || ||| | |||||||| || ||||| ||| |||||||| || Sbjct 140883 TGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGC 140824 Query 182192 TCCAGTCGCTGCAGC 182206 ||| || || || || Sbjct 140823 TCCTGTTGCAGCTGC 140809 >seq2833 Length=2661255 Score = 190 bits (210), Expect = 3e-43 Identities = 242/333 (73%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 183502 CTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTAC 183561 || || |||| |||| | || || || || |||||||| | || | || ||||| Sbjct 1209154 CTAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTGCGGCCTTAT 1209213 Query 183562 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCA 183621 |||| || || ||||||||| | |||||||||||||| ||||||| | || ||||| Sbjct 1209214 AATGTCATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCG 1209273 Query 183622 CTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTC 183681 || ||||||||| ||||||||||| | |||||| || |||||||| || ||| ||||| Sbjct 1209274 CTAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGATTC 1209333 Query 183682 CTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTT 183741 | | || |||| || || || || ||||| || ||||| || ||||||||||||||| Sbjct 1209334 ATCCTTTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTT 1209393 Query 183742 GCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACA 183801 | || || | || | || | | | ||||| ||||||| || ||| | ||||| Sbjct 1209394 GTCAGTGTATTGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAATACT 1209453 Query 183802 TTGTATGAAGATGGAGAACAAGCAAACACATTC 183834 || | |||||| || || ||||| |||||| Sbjct 1209454 TTATTTGAAGACGGTGATGGTGCAAATACATTC 1209486 >seq1029 Length=16155 Score = 123 bits (136), Expect = 3e-23 Identities = 239/350 (68%), Gaps = 2/350 (1%) Strand=Plus/Minus Query 183399 TTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAAGGGGACTTTCAACGCTGGTGCCAACT 183458 |||| | |||| || |||||||||| | | || | |||| || ||||| | | Sbjct 11957 TTCTTTGTTGTTCCTCTGGGGTCCTGCCGCCCCCGGCGCTTTTCCTCGTTGGTGTCCCTT 11898 Query 183459 TGGGGGACTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCT 183518 ||||| || ||| |||||| || |||| ||| || || | ||| | |||||| || | Sbjct 11897 CGGGGGTCTGTGGCCTTTTGTTGCTCTCCCCGGCGCTTTCGGCCTCCTCGGTTTCCTGTT 11838 Query 183519 TCGACAGTTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTC 183578 || | || | |||||||||| || | || |||| ||| | || ||||| Sbjct 11837 CCGTCCCTTCGCGCTTGCTCGCTCTGTTCCCTTGCGGCCTTCTCCTGCCCTCGCCTTCTC 11778 Query 183579 TGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATG 183638 |||||| ||||||||||||| ||| ||| | | | ||| || |||| |||| || Sbjct 11777 TGGTCCCCTTGCTGTTTTTGTTTCTGTCTTCTTGCTTTCTCCGCTCGGTCCGTCTGGTTG 11718 Query 183639 GTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTT-CAGG 183697 ||||||||| ||| |||| || || || || ||||| | ||||| | || || | || Sbjct 11717 GTTCTTTGCGCCTCGTTTTGGTGTCGCCGCTCTCTTTCGCTTCCTCCTCTTTTTTCCCGG 11658 Query 183698 GTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGT 183747 |||||| | ||| | || |||||| | | || |||| ||||| ||| Sbjct 11657 GTTTCCTC-CTTGGCCCTTGCCCCCCTTTCCTCTGCTGGGCGTTGCCGGT 11609 >seq2036 Length=7432206 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 182279 AACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCA 182338 ||| ||||| | ||| | || ||||| || ||||||||||||||| ||| || || || Sbjct 2690560 AACTTTCAATTTCATGATTGTATTCCAGGCCAAGCACAACATTCTTACGCACCCATTTCA 2690501 Query 182339 CATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTC 182395 ||| | |||||||| |||||||||| ||| | || || ||||| ||||| ||||| Sbjct 2690500 TATGCTAGGTGTAGCTGGTGTATTCGATGGCCCTCTATTCAGTGCTATGCATGGTTC 2690444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611669865288400