Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq3418 603 1e-167 seq2762 517 1e-141 seq684 271 8e-68 seq1564 248 9e-61 seq2653 244 1e-59 seq2647 212 6e-50 seq3417 194 2e-44 seq2833 165 8e-36 seq1029 111 2e-19 seq2036 87.8 2e-12 >seq3418 Length=161897 Score = 603 bits (668), Expect = 1e-167 Identities = 703/946 (74%), Gaps = 2/946 (0%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || |||||||| ||| | |||||||| || || ||| |||| || | || |||| Sbjct 1517 GGATGGTTTGGTGTTTTGATGATCCCTACT-TTATTGACCGCAACTTCTGTATTTATTAT 1459 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 || ||| ||||||||||||| || || || || || || || ||||| ||| ||||||| Sbjct 1458 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 1399 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 ||| | ||||| ||||| || ||||||||||| || |||| | ||| || || || Sbjct 1398 TCTGCTTTACGGAAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAGG 1339 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | ||||| ||||| || |||||||| || || ||||||| ||| | |||||||| || Sbjct 1338 TTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGG 1279 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588 |||||| | || | ||| | |||||| | ||||| || | ||| ||||||||||| Sbjct 1278 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 1219 Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648 ||||||||| || ||| || || ||||| |||||||| |||||||||||| ||||| Sbjct 1218 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCC 1159 Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708 |||||| |||||| | || || ||| | |||| || | ||||| || || ||||| Sbjct 1158 TGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGA 1099 Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768 |||||||||||| || ||||| ||||| ||||| | ||| |||| |||||||||||||| Sbjct 1098 TGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCA 1039 Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828 |||||| || |||||||| || || ||| | || || |||||||| |||||||| || || Sbjct 1038 CAACATTCTTATGCACCCATTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCT 979 Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888 || || ||||||||||| | || |||||| || | | || ||||| |||| Sbjct 978 ATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 919 Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948 || ||| ||| | || |||| ||||||||||| || |||||||| || || || || Sbjct 918 TGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC 859 Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008 |||||||| || ||||| || ||||||||||||||||| ||| ||||| ||| | Sbjct 858 TGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 799 Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068 || || |||||| | ||||| |||||||| || || |||||||| || || | || | Sbjct 798 GTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTAT 739 Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128 | || ||||| |||||||| || || ||||| |||||||| ||| | | || | || Sbjct 738 CAGCACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCA 679 Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188 ||| || || | || || ||||| || | ||||||| || || ||||||||||| Sbjct 678 AGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGT 619 Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCT 9234 ||||| ||| | || || || |||||||| || ||||| || ||| Sbjct 618 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 573 Score = 529 bits (586), Expect = 2e-145 Identities = 709/986 (72%), Gaps = 0/986 (0%) Strand=Plus/Plus Query 9827 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGACTACTTCTTTTT 9886 ||||||||| | | || || || |||||||| || ||||| || ||| | || ||| Sbjct 34473 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 34532 Query 9887 CCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTTGTCACGAGTTGG 9946 || ||| ||| | || | || || ||| | || || || || ||||| || ||| Sbjct 34533 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 34592 Query 9947 TACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTC 10006 || || || ||| | || ||| || | || ||| |||||| | || || || || Sbjct 34593 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAGTT 34652 Query 10007 TCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 10066 || || |||||| || | | | |||||| | | |||| ||||||||||| | || Sbjct 34653 TCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34712 Query 10067 GGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGA 10126 |||||||| || ||| || | ||||| || ||| ||||||| || |||||||| Sbjct 34713 GGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGC 34772 Query 10127 GCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATC 10186 || |||| |||| || || |||||||| || || ||||| || ||| || | | Sbjct 34773 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTG 34832 Query 10187 CGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTC 10246 || ||||| ||||| ||||| || ||||| || |||||||||||||| ||| ||| | Sbjct 34833 CGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTTG 34892 Query 10247 ATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATT 10306 || ||||| || || |||||| |||||||||||||||| ||||| || || || || || Sbjct 34893 ATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATA 34952 Query 10307 TTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATG 10366 || || ||| | ||||| | || || |||||||||||||| | || || || |||||| Sbjct 34953 TTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATG 35012 Query 10367 ATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTA 10426 ||||||||||| ||| || |||| | || | |||| || || || || | || ||| Sbjct 35013 ATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGTA 35072 Query 10427 GAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACT 10486 ||||| || | | | |||| || || ||||| || ||| |||||| | ||| Sbjct 35073 GAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACT 35132 Query 10487 CAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGA 10546 ||| ||||| || ||||| ||||||||||||||||| || |||||||| || ||||| Sbjct 35133 CAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGGG 35192 Query 10547 ATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGT 10606 |||||||| ||||||||| ||| | |||||||||||| | |||||||| || | ||| Sbjct 35193 GTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGT 35252 Query 10607 CTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTT 10666 | |||| | || ||||| | | ||||| || || || || ||||| || || || Sbjct 35253 TTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTC 35312 Query 10667 GTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAAT 10726 || |||||||| || |||| | ||||||||||||||||| || ||||| || || ||| Sbjct 35313 GTTTCTCAAGAAATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAAT 35372 Query 10727 ATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCACACGAAAGC 10786 || || | ||||||||| ||||||| |||||||| | || || || || |||| | Sbjct 35373 ATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAAC 35432 Query 10787 TTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || | ||||| || || ||||| || Sbjct 35433 CTTATATTCCCTGAGGAGGTTCTACC 35458 >seq2762 Length=458829 Score = 517 bits (572), Expect = 1e-141 Identities = 707/986 (72%), Gaps = 1/986 (0%) Strand=Plus/Minus Query 9827 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGACTACTTCTTTTT 9886 ||||||||| | | || || || |||||||| || ||||| || ||| | || ||| Sbjct 61303 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTT 61244 Query 9887 CCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTTGTCACGAGTTGG 9946 || ||| ||| | || | || || ||| | || || || || ||||| || ||| Sbjct 61243 CCTTGTGCCTATTTCGCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGG 61184 Query 9947 TACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTC 10006 || || || ||| | || ||| || | || ||| |||||| | || || || || Sbjct 61183 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCAGTT 61124 Query 10007 TCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 10066 || || |||||| || | | | |||||| | | |||| ||||||||||| | || Sbjct 61123 TCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 61064 Query 10067 GGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGA 10126 |||||||| || ||| || | ||||| || ||| ||||||| || |||||||| Sbjct 61063 GGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGC 61004 Query 10127 GCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATC 10186 || |||| |||| || || |||||||| || || ||||| || ||| || | | Sbjct 61003 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTG 60944 Query 10187 CGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTC 10246 || | ||| ||||| ||||| || ||||| || |||||||||||||| ||| ||| | Sbjct 60943 CGGCTTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTTG 60884 Query 10247 ATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATT 10306 || ||||| || || |||||| |||||||||||||||| ||||| || || || || || Sbjct 60883 ATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATA 60824 Query 10307 TTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATG 10366 || || ||| | ||||| | || || |||||||||||||| | || | || |||||| Sbjct 60823 TTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCATATG 60764 Query 10367 ATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTA 10426 ||||||||||| ||| || |||| | || | |||| || || || || | || ||| Sbjct 60763 ATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGTA 60704 Query 10427 GAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACT 10486 ||||| || | | | |||| || || ||||| || ||| |||||| | ||| Sbjct 60703 GAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACT 60644 Query 10487 CAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGA 10546 ||| ||||| || ||||| ||||||||||||||||| || |||||||| || ||||| Sbjct 60643 CAATCTGAAGAAACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGGG 60584 Query 10547 ATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGT 10606 |||||||| ||||||||| ||| | |||||||||||| | |||||||| || | ||| Sbjct 60583 GTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGT 60524 Query 10607 CTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTT 10666 | |||| | | ||||| | | ||||| || || || || ||||| || || || Sbjct 60523 TTATGGATGAGTGTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTC 60464 Query 10667 GTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAAT 10726 || |||||||| ||| |||| | ||||||||||||||||| || ||||| || || ||| Sbjct 60463 GTTTCTCAAGAAATC-GGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAAT 60405 Query 10727 ATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCACACGAAAGC 10786 || || | ||||||||| ||||||| |||||||| | || || || || |||| | Sbjct 60404 ATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAAC 60345 Query 10787 TTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || | ||||| || || ||||| || Sbjct 60344 CTTATATTCCCTGAGGAGGTTCTACC 60319 >seq684 Length=2855409 Score = 271 bits (300), Expect = 8e-68 Identities = 375/525 (71%), Gaps = 0/525 (0%) Strand=Plus/Plus Query 9944 TGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCT 10003 ||||| || || ||| | || ||| || | || ||| |||||| | || || || Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACTGCCGCA 2853955 Query 10004 GTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 10063 || || || |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 2853956 GTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 2854015 Query 10064 CAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCAC 10123 || |||||||| || ||| || | ||||| || ||| ||||||| || |||||| Sbjct 2854016 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCAC 2854075 Query 10124 GGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGA 10183 || || |||| |||| || || |||||||| || || ||||| || ||| || | Sbjct 2854076 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAA 2854135 Query 10184 ATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTC 10243 | || ||||| ||||| ||||| || ||||| || |||||||||||||| ||| ||| Sbjct 2854136 TTGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 2854195 Query 10244 CTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCG 10303 | || ||||| || || |||||| |||||||||||||||| ||||| || || || || Sbjct 2854196 TTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 2854255 Query 10304 ATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCAT 10363 || || || ||| | ||||| | || || |||||||||||||| | || || || ||| Sbjct 2854256 ATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 2854315 Query 10364 ATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACT 10423 |||||||||||||| ||| || |||| | || | |||| || || || || | || Sbjct 2854316 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACC 2854375 Query 10424 GTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTC 10468 |||||||| || | | | |||| || || ||||| || ||| Sbjct 2854376 GTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTC 2854420 >seq1564 Length=1404973 Score = 248 bits (274), Expect = 9e-61 Identities = 285/381 (75%), Gaps = 2/381 (1%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || |||||||| ||| | |||||||| || || ||| |||| || | || |||| Sbjct 141179 GGATGGTTTGGTGTTTTGATGATCCCTACT-TTATTGACCGCAACTTCTGTATTTATTAT 141121 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 || ||| ||||||||||||| || || || || || || || ||||| ||| ||||||| Sbjct 141120 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 141061 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 ||| | ||||| ||||| || ||||||||||| || |||| | ||| || || | Sbjct 141060 TCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAAG 141001 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | ||||| ||||| || |||||||| || || ||||||| ||| | |||||||| || Sbjct 141000 TTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGG 140941 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588 |||||| | || | ||| | |||||| | ||||| || | ||| ||||||||||| Sbjct 140940 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 140881 Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648 ||||||||| || ||| || || ||||| |||||||| |||||||||||| ||||| Sbjct 140880 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCC 140821 Query 8649 TGTTGCCGCTGCTTCTGCTGT 8669 |||||| |||||| | || || Sbjct 140820 TGTTGCAGCTGCTACCGCAGT 140800 >seq2653 Length=4899193 Score = 244 bits (270), Expect = 1e-59 Identities = 289/391 (74%), Gaps = 9/391 (2%) Strand=Plus/Plus Query 8621 CTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCT 8680 ||||||| |||||||||||| ||||||||||| |||||| | || || ||| | ||| Sbjct 3225432 CTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCT 3225491 Query 8681 ATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCA 8740 | || | ||||| || || ||||||||||||||||| || ||||| ||||| |||| Sbjct 3225492 ACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCA 3225551 Query 8741 ACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTGA--------TGCACCCCTTCCA 8792 | | ||| |||| ||||||||| |||||||||| || | ||||||| || || Sbjct 3225552 ATTC-ATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCA 3225610 Query 8793 CATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCAATGCATGGTTCACT 8852 ||| | || || |||||||| |||||||| || || || || ||||||||||| | Sbjct 3225611 TATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTT 3225670 Query 8853 CGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAAAACTATGGCTACAA 8912 || |||||| || | || ||||| |||| || | | ||| | || |||| Sbjct 3225671 GGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAG 3225730 Query 8913 GTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTT 8972 ||||||||||| || |||||||| || || || || |||||||| || ||||| || || Sbjct 3225731 ATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATT 3225790 Query 8973 GATCTTCCAATATGCATCTTTTAACAATTCT 9003 |||||| |||||||| ||| ||||| ||| Sbjct 3225791 GATCTTTCAATATGCTAGTTTCAACAACTCT 3225821 >seq2647 Length=4788780 Score = 212 bits (234), Expect = 6e-50 Identities = 285/394 (72%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 8666 CTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCTCTTGGTA 8725 |||| ||| || |||| || | || || || || ||||||||||||||||| || | Sbjct 734482 CTGTTTTC-TTATCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 734424 Query 8726 TCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTGATGCACC 8785 |||| |||| ||||| | ||| |||| ||||||| |||||||||||| || ||||||| Sbjct 734423 TCTCTAGTACTTTCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACC 734364 Query 8786 CCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCAATGCATG 8845 | ||||| ||| | || || ||| |||| |||||||| || || || | ||||||| Sbjct 734363 CATTCCATATGATAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATG 734304 Query 8846 GTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAAAACTATG 8905 |||| | || | |||| || | | || |||| ||| || ||| ||| | | Sbjct 734303 GTTCCTTGGTAATTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAG 734244 Query 8906 GCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTTG 8965 | ||||| ||||||||||| || | | |||| || || || | | |||||| || |||| Sbjct 734243 GTTACAAATTCGGTCAAGAGGAAG-ACCTTATAATATCGTAGTTGTTCATGGTTATTTTG 734185 Query 8966 GTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTCG 9025 | || ||||||||| ||||||| ||| ||||| ||| | || || |||||| | | Sbjct 734184 GCCGATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 734125 Query 9026 CTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGC 9059 |||| |||| ||| | || |||||||| || || Sbjct 734124 CTGCTTGGCTTGTAGCAGGTATCTGGTTCACTGC 734091 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 9073 ACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGA 9132 || ||||| |||||||| || || ||||| |||||||| || | || || | ||||| Sbjct 733756 ACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAAGGC 733697 Query 9133 CGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATG 9192 || || | || || ||||| || | |||||| || || ||||||||||| ||| Sbjct 733696 CGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTTATG 733637 Query 9193 CACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 || ||| | || || | |||||||| || ||||| || Sbjct 733636 CATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGC 733599 >seq3417 Length=265768 Score = 194 bits (214), Expect = 2e-44 Identities = 235/320 (73%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 8915 TCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGA 8974 |||||||||| || ||||||| || || || || |||||| || ||||| || |||| Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 8975 TCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGC 9034 ||||||||||||| ||| ||||| ||| | || || |||||| | ||||| |||| Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 9035 CTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATG 9094 |||| ||||| |||||||| || || | || || || ||||| |||||||| |||| Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 9095 GCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTGCTCAACACCTGGGCAG 9154 | | || |||||||| ||| | | || | ||||| || || | || || ||||| | Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTG 155971 Query 9155 ACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAAAGAAACGCACACAACT 9214 | | ||||||| || || ||||||||||| ||||| ||| | || || || |||| Sbjct 155970 ATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 155911 Query 9215 TCCCGCTTGACCTTGCGGCT 9234 |||| || ||||| || ||| Sbjct 155910 TCCCTCTAGACCTAGCTGCT 155891 >seq2833 Length=2661255 Score = 165 bits (182), Expect = 8e-36 Identities = 241/341 (71%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 10137 TAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACA 10196 |||| || | |||||||| || || ||||| || ||| || | | || ||||| | Sbjct 1209155 TAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAATTGCGGCCTTATA 1209214 Query 10197 ATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCAC 10256 ||| ||||| || ||||| | |||||||||||||| ||| ||| | || ||||| | Sbjct 1209215 ATGTCATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCGC 1209274 Query 10257 TCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCC 10316 | || |||||| ||||||||||||||| ||||| || || || || || || || ||| Sbjct 1209275 TAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGATTCA 1209334 Query 10317 TTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTG 10376 | || || | || || |||||||||||||| | || || || |||||||||||||||| Sbjct 1209335 TCCTTTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTG 1209394 Query 10377 CTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACAC 10436 || || |||| | || | ||| || || || || | || ||| |||| || Sbjct 1209395 TCAGTGTATTGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAATACTT 1209454 Query 10437 TTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTT 10477 | | | |||| || || ||||| || ||| |||||| Sbjct 1209455 TATTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTT 1209495 >seq1029 Length=16155 Score = 111 bits (122), Expect = 2e-19 Identities = 202/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 10094 GGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTA 10153 ||||| || ||| ||||||| || |||| ||| || |||| | |||| || |||| Sbjct 11896 GGGGGTCTGTGGCCTTTTGTTGCTCTCCCCGGCGCTTTCGGCCTCCTCGGTTTCCTGTTC 11837 Query 10154 CGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCT 10213 || | || | ||| || | | || | || |||| ||| |||| || ||| Sbjct 11836 CGTCCCTTCGCGCTTGCTCGCTCTGTTCCCTTGCGGCCTTCTCCTGCCCTCGCCTTCTCT 11777 Query 10214 GGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGG 10273 || || ||||||||||||| ||| ||| | | | ||| ||||| | |||| ||||| Sbjct 11776 GGTCCCCTTGCTGTTTTTGTTTCTGTCTTCTTGCTTTCTCCGCTCGGTCCGTCTGGTTGG 11717 Query 10274 TTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGC 10333 ||||||||||| |||| || ||||| || | || |||||||| ||||| | | || Sbjct 11716 TTCTTTGCGCCTCGTTTTGGTGTCGCCGCTCTCTTTCGCTTCCTCCTCTTTTTTCCCGGG 11657 Query 10334 TTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGCTGGTATACTGGG 10389 |||| | |||| | | ||||| | | || |||| ||||| ||| | |||| Sbjct 11656 TTTCCTCCTTGGCCCTTGCCCCCCTTTCCTCTGCTGGGCGTTGCCGGTGTCTTGGG 11601 >seq2036 Length=7432206 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 8734 ACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTGATGCACCCCTTCCAC 8793 || ||||| | ||| |||| |||||||| |||||||||| || | |||||| || || Sbjct 2690559 ACTTTCAATTTCATGATTGTATTCCAGGCCAAGCACAACATTCTTACGCACCCATTTCAT 2690500 Query 8794 ATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCAATGCATGGTTC 8849 ||||| ||||| |||||||| |||| || |||| || || ||||||||||| Sbjct 2690499 ATGCTAGGTGTAGCTGGTGTATTCGATGGCCCTCTATTCAGTGCTATGCATGGTTC 2690444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516457933392000