Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq3418 728 0.0 seq2762 509 2e-139 seq684 275 7e-69 seq2647 257 2e-63 seq2653 251 8e-62 seq3417 248 1e-60 seq1564 232 7e-56 seq2833 120 3e-22 seq900 111 2e-19 seq2036 102 9e-17 seq317 93.3 5e-14 seq1940 82.4 8e-11 seq1298 82.4 8e-11 >seq3418 Length=161897 Score = 728 bits (806), Expect = 0.0 Identities = 758/989 (77%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | |||||||| || ||||| ||||| |||| ||||| || || || Sbjct 1559 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1500 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || || |||||| ||| ||||| Sbjct 1499 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTC 1442 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || ||||||||||| || |||| || || | || ||||||| Sbjct 1441 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTGCTTTACGGAAACA 1382 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || |||||||||||| |||| || ||||| ||||| ||| | ||||| ||||| | Sbjct 1381 ATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTATAGGTTTACACTTTTACCCAA 1322 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 | |||||||| ||| | || |||||| | |||||||| ||||||| |||| ||| Sbjct 1321 TTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 1262 Query 161174 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 161233 | | |||||| | |||| | | ||||||||||||||||||||||||| || || Sbjct 1261 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 1202 Query 161234 GTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 161293 ||||||| ||||| ||||||||| || |||||||| |||||||| || || || | | Sbjct 1201 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCG 1142 Query 161294 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 161353 |||| ||| || |||| || ||||||| || ||| ||||||| |||||||| || | Sbjct 1141 CAGTTTTCTTGATCTACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 1082 Query 161354 TCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACC 161413 |||||||||| ||||| | |||| |||| ||||| || |||||||||||||| ||||||| Sbjct 1081 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 1022 Query 161414 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 161473 | || |||||| | |||||||| ||||| || ||||| || || |||||||| ||||| | Sbjct 1021 CATTTCATATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 962 Query 161474 GTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATG 161533 |||| |||| || ||| || | | |||||||| ||||| || || ||| | | Sbjct 961 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 902 Query 161534 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCG 161593 |||||| ||||||||||| ||||| || || || ||||| ||||| || || || || | Sbjct 901 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 842 Query 161594 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTG 161653 | || |||| |||||||| ||| ||||||||||| || ||| | ||||||||| | | Sbjct 841 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAG 782 Query 161654 CTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 161713 ||||||||||||| || || |||||||||||||| | || | ||||| |||||||||| Sbjct 781 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCA 722 Query 161714 ACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACA 161773 |||| || |||||||| |||||||| || | ||||||||||| || || || || | Sbjct 721 ACCTAAACGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGCCGTGTAATTAATA 662 Query 161774 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATG 161833 | ||||| || | | ||||||||| ||||| |||||||| ||||| || || |||| Sbjct 661 CTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 602 Query 161834 CTCACAACTTCCCTCTTGACCTTGCTGCT 161862 |||| ||||||||||| ||||| |||||| Sbjct 601 CTCATAACTTCCCTCTAGACCTAGCTGCT 573 Score = 531 bits (588), Expect = 6e-146 Identities = 715/989 (72%), Gaps = 6/989 (1%) Strand=Plus/Plus Query 162144 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 162203 || ||||||||||||||||| |||||||| || || | || ||||| ||| ||| | Sbjct 34488 AGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTC 34547 Query 162204 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 162263 ||| | || |||||| | || || || || || || || |||||||| || ||| | Sbjct 34548 GCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTG 34607 Query 162264 GCGAGTTCCTATCTTG-AGGGTGCAAACTTTCTT-ACTGCGGCAGTTTCTACTCCAGCAG 162321 || ||||||||| | | ||| ||||| |||||| ||||| |||||||| ||||| || Sbjct 34608 GCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAGTTTCGACTCCTGCTA 34665 Query 162322 ACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCC 162381 | | | | |||||| | || | |||||||||||||| | ||||| || || | | Sbjct 34666 ATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTC 34725 Query 162382 GCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTA 162441 | ||||| ||| | ||||| || ||||||||||| || |||||||| || || | ||| | Sbjct 34726 GTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGCGCTTTCGGACTAA 34785 Query 162442 TAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAAT 162500 ||||||||||| | || || || || || || ||| || || | | || ||||| ||| Sbjct 34786 TAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT-TGCGGCCTTATAAT 34844 Query 162501 GCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTG 162560 || || || ||||| ||||| |||||||| || ||| ||| || | || ||||| | Sbjct 34845 GCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCGCTA 34904 Query 162561 GGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTG 162620 || || || |||||||| || || || || || ||||| || || |||||| | Sbjct 34905 GGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 34964 Query 162621 CTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCA 162680 ||||| | |||||||| ||||| ||||| | || || ||||| |||||||| || || Sbjct 34965 CTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCC 35024 Query 162681 GGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTG 162740 ||| | | || | ||| ||||| | ||||||||||| | || || |||||||| | Sbjct 35025 GGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTA 35084 Query 162741 TACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAA 162800 | ||||| || || ||||| || || || ||| || | || || |||||| Sbjct 35085 TTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAATCTGAAGAA 35144 Query 162801 ACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGT 162860 || ||||| ||||||||||| |||||||| ||||| || || || || |||||||| Sbjct 35145 ACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCC 35204 Query 162861 AACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGT 162920 || || |||||||| |||||||||||| | ||||| || || | ||| | |||| ||| Sbjct 35205 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 35264 Query 162921 TCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAA 162980 || | || | | || || || || || || ||||| || ||||| || ||||||||| Sbjct 35265 GCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAA 35324 Query 162981 GTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAAT 163040 |||| || || ||||| ||||| ||||| || ||||| || || || ||||| | || Sbjct 35325 ATTCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAAC 35384 Query 163041 GAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCT 163100 ||||| |||| || ||| | || | || || |||||||| ||| || | |||||| Sbjct 35385 GAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 35444 Query 163101 GAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 || ||||| | ||| | || |||||||| Sbjct 35445 GAGGAGGTTCTACCACGTGGAAACGCTCT 35473 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| ||| |||||||||||||||||| ||| |||||| ||| | ||| | ||||||||| Sbjct 68894 GGGATGTGGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCGAAT 68835 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 68834 CCTGTCATCCCTACCTAT 68817 >seq2762 Length=458829 Score = 509 bits (564), Expect = 2e-139 Identities = 711/989 (72%), Gaps = 7/989 (1%) Strand=Plus/Minus Query 162144 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 162203 || ||||||||||||||||| |||||||| || || | || ||||| ||| ||| | Sbjct 61288 AGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTC 61229 Query 162204 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 162263 ||| | || |||||| | || || || || || || || |||||||| || ||| | Sbjct 61228 GCTGTAGGAGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTG 61169 Query 162264 GCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAG 162321 || ||||||||| | || ||| |||| ||||||| |||| |||||||| ||||| || Sbjct 61168 GCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCGCAGTTTCGACTCCTGCTA 61111 Query 162322 ACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCC 162381 | | | | |||||| | || | |||||||||||||| | ||||| || || | | Sbjct 61110 ATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTC 61051 Query 162382 GCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTA 162441 | ||||| ||| | ||||| || ||||||||||| || |||||||| || || | ||| | Sbjct 61050 GTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCCACGGCGCTTTCGGACTAA 60991 Query 162442 TAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAAT 162500 ||||||||||| | || || || || || || ||| || || | | || | ||| ||| Sbjct 60990 TAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT-TGCGGCTTTATAAT 60932 Query 162501 GCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTG 162560 || || || ||||| ||||| |||||||| || ||| ||| || | || ||||| | Sbjct 60931 GCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCGCTA 60872 Query 162561 GGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTG 162620 || || || |||||||| || || || || || ||||| || || |||||| | Sbjct 60871 GGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 60812 Query 162621 CTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCA 162680 ||||| | |||||||| ||||| ||||| | || | ||||| |||||||| || || Sbjct 60811 CTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACTCATTTCATATGATGGGAGTTGCC 60752 Query 162681 GGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTG 162740 ||| | | || | ||| ||||| | ||||||||||| | || || |||||||| | Sbjct 60751 GGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTA 60692 Query 162741 TACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAA 162800 | ||||| || || ||||| || || || ||| || | || || |||||| Sbjct 60691 TTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAATCTGAAGAA 60632 Query 162801 ACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGT 162860 || ||||| ||||||||||| |||||||| ||||| || || || || |||||||| Sbjct 60631 ACTTATTCAATGGTTACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCC 60572 Query 162861 AACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGT 162920 || || |||||||| |||||||||||| | ||||| || || | ||| | |||| ||| Sbjct 60571 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 60512 Query 162921 TCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAA 162980 | | || | | || || || || || || ||||| || ||||| || ||||||||| Sbjct 60511 GTTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAA 60452 Query 162981 GTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAAT 163040 ||| || || ||||| ||||| ||||| || ||||| || || || ||||| | || Sbjct 60451 -ATCGGGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAAC 60393 Query 163041 GAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCT 163100 ||||| |||| || ||| | || | || || |||||||| ||| || | |||||| Sbjct 60392 GAAGGTATTCGTGCTTGGATGGCCGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 60333 Query 163101 GAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 || ||||| | ||| | || |||||||| Sbjct 60332 GAGGAGGTTCTACCACGTGGAAACGCTCT 60304 >seq684 Length=2855409 Score = 275 bits (304), Expect = 7e-69 Identities = 372/512 (73%), Gaps = 6/512 (1%) Strand=Plus/Plus Query 162246 TGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTTA-CTGCGG 162303 |||||||| || ||| | || ||||||||| | || ||| |||| ||||||| |||| | Sbjct 2853896 TGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACTGCCG 2853953 Query 162304 CAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGT 162363 ||||||| ||||| || | | | | |||||| | || | |||||||||||||| Sbjct 2853954 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAG 2854013 Query 162364 CTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCC 162423 | ||||| || || | || ||||| ||| | ||||| || ||||||||||| || |||| Sbjct 2854014 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGGGGTCTGTGGACTTTTGTTGCTCTCC 2854073 Query 162424 ACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATC 162482 |||| || || | ||| |||||||||||| | || || || || || || ||| || || Sbjct 2854074 ACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTC 2854133 Query 162483 GGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTT 162542 | | || ||||| ||||| || || ||||| ||||| |||||||| || ||| ||| Sbjct 2854134 AAT-TGCGGCCTTATAATGCCATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTA 2854192 Query 162543 TTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCA 162602 || | || ||||| | || || || |||||||| || || || || || ||| Sbjct 2854193 TTCTTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCA 2854252 Query 162603 GCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTT 162662 || || || |||||| | ||||| | |||||||| ||||| ||||| | || || ||| Sbjct 2854253 GCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTT 2854312 Query 162663 CACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTG 162722 || |||||||| || || ||| | | || | ||| ||||| | ||||||||||| | Sbjct 2854313 CATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCCTTGCTATGCGCTATTCATGGTGCT 2854372 Query 162723 ACAGTTGAAAATACACTGTACGAAGATGGCGA 162754 || || |||||||| | | ||||| || || Sbjct 2854373 ACCGTAGAAAATACTTTATTTGAAGACGGTGA 2854404 >seq2647 Length=4788780 Score = 257 bits (284), Expect = 2e-63 Identities = 287/382 (75%), Gaps = 1/382 (0%) Strand=Plus/Minus Query 161306 TCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGT 161365 |||| || |||| || || ||| ||||||| |||||||| || |||||| |||| | Sbjct 734471 TCTACCCAATCGGCCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTACTT 734412 Query 161366 TCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGC 161425 |||| | |||| |||| ||||| | |||||||||||||| |||||||| ||||||||| Sbjct 734411 TCAATTTCATGATTGTATTCCAGGTTGAGCACAACATTCTTATGCACCCATTCCATATGA 734352 Query 161426 TCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTA 161485 | |||||||| |||| || ||||| || || ||||||| ||||| ||||| |||| | Sbjct 734351 TAGGCGTAGCTAGTGTATTCGGCGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAA 734292 Query 161486 CCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCG 161545 ||| || | | ||||||| |||| || || ||| | |||||||| |||| Sbjct 734291 TTTCTAGTTTGATCAGGGAAACCAAAAAAAATGAATCTGCTAACGAAGGTTACAAATTCG 734232 Query 161546 GTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTT 161605 ||||||| ||||| | || || ||||| | || || || || || || || |||| | Sbjct 734231 GTCAAGAGGAAGA-CCTTATAATATCGTAGTTGTTCATGGTTATTTTGGCCGATTGATCT 734173 Query 161606 TCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTG 161665 || |||| ||| ||||||||||| || ||| | ||||||||| | |||||||||| || Sbjct 734172 TCTAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCTTG 734113 Query 161666 TTGTTGGCATCTGGTTCACTGC 161687 | | || |||||||||||||| Sbjct 734112 TAGCAGGTATCTGGTTCACTGC 734091 Score = 123 bits (136), Expect = 3e-23 Identities = 125/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 161698 AGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAG 161757 || || |||||||||||||| || |||||||| |||||||| ||| | |||||||||| Sbjct 733759 AGTACTATGGCATTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAATTGATAGTCAA 733700 Query 161758 GGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTG 161817 || || || || || ||||| || | | |||| |||| ||||| |||||||| Sbjct 733699 GGCCGTGTAATTAATACTTGGGCTGATATCATTAACCATGCTAACCTTGGTATGGAAGTT 733640 Query 161818 ATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACCTTGCTG 161860 ||||| || | ||||||| ||||||||||| ||||| |||| Sbjct 733639 ATGCATGAATGTAATGCTCGTAACTTCCCTCTAGACCTAGCTG 733597 >seq2653 Length=4899193 Score = 251 bits (278), Expect = 8e-62 Identities = 290/390 (74%), Gaps = 9/390 (2%) Strand=Plus/Plus Query 161249 CTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCT 161308 |||||||| || |||||||| |||||||| || || || | ||||| ||| || ||| Sbjct 3225432 CTTGGATTGCTGTTGCATACTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCT 3225491 Query 161309 ATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCA 161368 | || ||||||| || ||| ||||||| |||||||| || ||||||||||| |||| Sbjct 3225492 ACCCAATCGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCA 3225551 Query 161369 ACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCA--------TGCACCCCTTCCA 161420 | | |||| |||| ||||| || ||||||||||||| | ||||||| || || Sbjct 3225552 ATT-CATGATTGTATTCCAGGCTAAGCACAACATTCTTAATTTCTTATGCACCCATTTCA 3225610 Query 161421 TATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCT 161480 |||| | |||||||| ||||| || ||||| || || |||||||| ||||| ||||| | Sbjct 3225611 TATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTT 3225670 Query 161481 GGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAA 161540 ||| || ||| || | |||||||| ||||| || | ||| | ||||||| Sbjct 3225671 GGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAATGAATATGCTAACGAAGGTTACAG 3225730 Query 161541 GTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCT 161600 ||||||||||| ||||| || || || ||||| ||||| || || || || || || | Sbjct 3225731 ATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATT 3225790 Query 161601 GATTTTCCAATACGCTTCCTTCAACAACTC 161630 ||| || ||||| ||| ||||||||||| Sbjct 3225791 GATCTTTCAATATGCTAGTTTCAACAACTC 3225820 >seq3417 Length=265768 Score = 248 bits (274), Expect = 1e-60 Identities = 247/320 (77%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 161543 TCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGA 161602 |||||||||| ||| | || || || ||||| ||||| || || || || || ||| Sbjct 156210 TCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATAATTATTTTGGCCGATTGA 156151 Query 161603 TTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGC 161662 | |||||||| ||| ||||||||||| || ||| | ||||||||| | |||||||||| Sbjct 156150 TCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGC 156091 Query 161663 CTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATG 161722 |||| || || |||||||||||||| | || | ||||| |||||||||||||| |||| Sbjct 156090 CTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCATTCAACCTAAATG 156031 Query 161723 GTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAG 161782 ||| || |||||||| || | |||||||| || || || || || || ||||| | Sbjct 156030 GTTGAAATTTCAACCAATCCGTAGTTGATAGCCAAGGCCGCGTAATTAAGACTTGGGCTG 155971 Query 161783 ACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACT 161842 | | | ||||||||| ||||| |||||||| ||||| || || |||||||| |||| Sbjct 155970 ATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 155911 Query 161843 TCCCTCTTGACCTTGCTGCT 161862 ||||||| ||||| |||||| Sbjct 155910 TCCCTCTAGACCTAGCTGCT 155891 >seq1564 Length=1404973 Score = 232 bits (256), Expect = 7e-56 Identities = 285/384 (74%), Gaps = 4/384 (1%) Strand=Plus/Minus Query 160916 TTGGTTGGTTCGGCGTCCTGATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCAT 160973 |||| ||||| || || ||||||| |||| ||| | | | || || | ||| || || Sbjct 141181 TTGGATGGTTTGGTGTTTTGATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTAT 141124 Query 160974 CATTGCCTTCGTTGGTGCTCCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGG 161033 || |||||| ||| |||||| || || || || || || ||||||||||| || |||| Sbjct 141123 TATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGG 141064 Query 161034 TTCGCTCATGTATGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTAT 161093 || || | || || ||||| || |||||||||||| |||| || ||||| ||||| Sbjct 141063 ATCTCTACTTTACGGGAACAATATTATCTCTGGTGCTATTATTCCGACTTCTGCAGCTAT 141004 Query 161094 CGGTCTGCACTTCTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGG 161153 || | ||||| ||||| || |||||||| ||| | || |||||| | |||||||| Sbjct 141003 AAGTTTACACTTTTACCCAATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGG 140944 Query 161154 TGGTCCTTTCCAACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCG 161213 ||||||| |||| |||| | |||||| | |||| | | |||||||||||| Sbjct 140943 CGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCG 140884 Query 161214 TGAGTGGGAACTTTCTTACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGC 161273 ||||||||||||| || ||||||||| ||||| ||||||||| || |||||||| || Sbjct 140883 TGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATACTCAGC 140824 Query 161274 TCCTGTCGCTGCAGCGAGTGCAGT 161297 |||||| || || || | ||||| Sbjct 140823 TCCTGTTGCAGCTGCTACCGCAGT 140800 >seq2833 Length=2661255 Score = 120 bits (132), Expect = 3e-22 Identities = 223/321 (69%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 162437 ACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTT 162495 ||| ||||||| |||| | || || || || || || ||| || || | | || |||| Sbjct 1209153 ACTAATAGGTTCCATGTTACGTCAATTCGAGCTTGCTCGATCTGTTCAAT-TGCGGCCTT 1209211 Query 162496 ACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATC 162555 | |||| || || ||||| ||| | |||||||| || ||| ||| || | || |||| Sbjct 1209212 ATAATGTCATCGCATTCTCTGGTTCAATTGCTGTTTTTGTTTCTGTATTCTTGATTTATC 1209271 Query 162556 CTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGAT 162615 | | || || || |||||||| || | || || || ||||| || || |||| Sbjct 1209272 CGCTAGGTCAGTCTGGTTGGTTCTTTGCGCTTAGTTTTGGTGTAGCAGCTATATTTCGAT 1209331 Query 162616 TCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCG 162675 || | || || | |||||||| ||||| ||||| | || || ||||| |||||||| | Sbjct 1209332 TCATCCTTTTTTTTCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAG 1209391 Query 162676 TAG-CAG-GTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAA 162733 | | ||| |||| | || | ||| ||| | | ||||||||||| | || || |||| Sbjct 1209392 TTGTCAGTGTAT--TGGGCGCTGCCTTGGTATGCGCTATTCATGGTGCTACCGTATAAAA 1209449 Query 162734 TACACTGTACGAAGATGGCGA 162754 ||| | | ||||| || || Sbjct 1209450 TACTTTATTTGAAGACGGTGA 1209470 >seq900 Length=2505520 Score = 111 bits (122), Expect = 2e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 158332 GACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGC 158391 |||||| ||| | || ||| || |||||| ||| | ||| ||| ||||||||| Sbjct 1399607 GACGACGTTTACGTTCTGGACCAGGCGGAGGAATTGGGGGCCGATCTCCCGTACTCGTGC 1399548 Query 158392 CGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGC 158451 || || ||| | || || || || || || ||| | ||||| |||||||| ||||| | Sbjct 1399547 CGCGCCGGCTCCTGCTCCTCCTGCGCCGGCAAAGTGGTCTCCGGCACCGTCGACCAGTCC 1399488 Query 158452 GACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCT 158511 ||| | |||||| ||||| ||||| || || ||||| | | | || || || || || Sbjct 1399487 GACAACAGCTTCCTCGACGACGACCAGATGGACTCTGGCTACGTCCTCACCTGCGTCGCT 1399428 Query 158512 TATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555 || ||||| ||| ||| ||| |||| |||||||||| || Sbjct 1399427 TACCCTACGTCTGACGTTGTCATTCAGACCCACAAGGAAGAAGA 1399384 >seq2036 Length=7432206 Score = 102 bits (112), Expect = 9e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 161362 ACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCAT 161421 || ||||| | |||| |||| ||||| || ||||||||||||| | |||||| || ||| Sbjct 2690559 ACTTTCAATTTCATGATTGTATTCCAGGCCAAGCACAACATTCTTACGCACCCATTTCAT 2690500 Query 161422 ATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTC 161477 ||||| || ||||| ||||| || | || |||| |||||||| ||||| ||||| Sbjct 2690499 ATGCTAGGTGTAGCTGGTGTATTCGATGGCCCTCTATTCAGTGCTATGCATGGTTC 2690444 >seq317 Length=7866670 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 158332 GACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGC 158391 |||||| ||| | || ||| || |||||| ||| | ||| ||| ||||||||| Sbjct 2809686 GACGACGTTTACGTTCTGGACCAGGCGGAGGAATTGGGGGCCGATCTCCCGTACTCGTGC 2809745 Query 158392 CGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGC 158451 || || ||| | || || || || || || || | ||||| |||||||| ||||| | Sbjct 2809746 CGCGCCGGCTCCTGCTCCTCCTGCGCCGGCAAGGTGGTCTCCGGCACCGTCGACCAGTCC 2809805 Query 158452 GACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCT 158511 ||| | |||||| ||||| || || || || | || | | | || || || || || Sbjct 2809806 GACAACAGCTTCCTCGACGACGAGCAGATGGACGCCGGCTACGTCCTCACCTGCGTCGCT 2809865 Query 158512 TATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555 || ||||| | | ||| |||||||| |||||||||| || Sbjct 2809866 TACCCTACGTCTAACGTTGTCATTGAGACCCACAAGGAAGAAGA 2809909 >seq1940 Length=1469177 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| ||| |||||||||||||||||| ||| |||||| ||| | ||| | ||||||||| Sbjct 852183 GGGATGTGGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCGAAT 852124 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 852123 CCTGTCATCCCTACCTAT 852106 >seq1298 Length=738056 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| ||| |||||||||||||||||| ||| |||||| ||| | ||| | ||||||||| Sbjct 48563 GGGATGTGGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCGAAT 48622 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 48623 CCTGTCATCCCTACCTAT 48640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547723797500880