Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq3418 587 1e-162 seq2762 536 2e-147 seq684 295 8e-75 seq2653 244 1e-59 seq1564 226 4e-54 seq2647 187 3e-42 seq3417 170 2e-37 seq2833 167 3e-36 seq1029 107 2e-18 seq2036 95.1 2e-14 seq3267 93.3 5e-14 >seq3418 Length=161897 Score = 587 bits (650), Expect = 1e-162 Identities = 707/964 (73%), Gaps = 8/964 (1%) Strand=Plus/Plus Query 103171 AGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAG 103230 |||||| ||||| || |||||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 573 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 632 Query 103231 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGAT 103290 ||| ||||| | | || ||||| || || | ||||| || |||| ||||| | Sbjct 633 GTTAGCACGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTAC 692 Query 103291 GGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGT 103350 ||| |||||||| ||||| ||||| |||||||| ||||| ||||| | ||| | || || Sbjct 693 GGATTGGTTGAAATTGAAACCGTTTAGGTTGAATGCCATAGTGCTGATACCTAAAGCAGT 752 Query 103351 GAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTT 103410 |||||||||||| ||||| || | |||||||| Sbjct 753 GAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 812 Query 103411 GAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTA 103470 ||| || |||||||||||||| || || || ||||||||||| |||||||| || || Sbjct 813 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATA 872 Query 103471 TGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTC 103530 || ||||||||||| ||||| ||||||| | ||| ||||||| |||| || || || Sbjct 873 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTC 932 Query 103531 AC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGA 103589 | || | | | || | || |||| ||||| |||||||||||||| || || || |||| Sbjct 933 CCTGATCAAACTAGAAGTTACCAAG-GAACCATGCATAGCACTGAATAGGGAGCCGCCGA 991 Query 103590 AGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGA 103649 | || ||||| ||||| | ||| || || |||||||| |||||||| || || || |||| Sbjct 992 ATACACCAGCTACGCCTAACATATGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGA 1051 Query 103650 AGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAAC 103709 | || | |||| | ||||| || || || || || | ||||||| |||| || || | Sbjct 1052 ATACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTC 1111 Query 103710 CTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATG 103769 | ||||| | ||||||| |||||| ||||||| ||||| ||||||||||| ||||||| Sbjct 1112 CCTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAGTATG 1171 Query 103770 CGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATAT 103829 | ||| ||||| |||||||| ||||||||| | | |||||||||||| ||||| | Sbjct 1172 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGT 1231 Query 103830 ATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACA 103889 | | | |||| | |||||| | || | |||| ||||||| ||||| || | Sbjct 1232 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATA 1291 Query 103890 GCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGG 103949 ||| ||||||| ||||| ||||||||||| || || ||||| | ||| || || || Sbjct 1292 ACCATTCATCAACGGATGCCGCTTCCCAAATTGGGTAAAAGTGTAAACCTATAGC--TGC 1349 Query 103950 AGGAG--GGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGAC 104007 || || |||| || ||||||||||| || ||||| ||||| | || || |||| || Sbjct 1350 AGAAGTCGGAATAATAGCACCAGAGATAATATTGTTTCCGTAAAGCAGAGATCCAGAAAC 1409 Query 104008 GGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GC 104066 ||||||||||| || || ||||| || ||||| || || | ||| || | || || | Sbjct 1410 AGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATAATAAATAC 1469 Query 104067 AGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGAC 104126 ||| ||||| | ||| | ||| |||||||||| ||||| ||||| |||| || |||| Sbjct 1470 AGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGAC 1528 Query 104127 GGTT 104130 |||| Sbjct 1529 GGTT 1532 Score = 549 bits (608), Expect = 2e-151 Identities = 726/1006 (72%), Gaps = 6/1006 (1%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| |||| || ||||||||| || ||||| Sbjct 35473 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 35414 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | |||||| || || || || || || |||||||| || Sbjct 35413 TGAGCGGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTT 35354 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| ||||| | || ||||| || || |||||||| ||||| ||| Sbjct 35353 TCAAATTCAGGATCTTCCGCTGCCCGAATTTCTTGAGAAACGAAGTCATAGGCACGTAGG 35294 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || || || ||||| | | || | | ||| |||| | ||| | || || ||||| Sbjct 35293 TTCAGGGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 35234 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 | |||||||||||| ||||| | ||||| ||| |||| ||||||||||| ||||| Sbjct 35233 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 35174 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 || ||||| || ||||||||||||||||| ||||| ||| || | | || || | Sbjct 35173 AAGCGGTTAGCAGTAACCATTGAATAAGTTTCTTCAGATTGAGTTGGGTTAAAAGCGCGG 35114 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || ||||| |||||| |||||| | | ||| || || || || |||| || || Sbjct 35113 AATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATA 35054 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | |||| || | |||| | ||| ||||| ||||||||||| |||||||| | Sbjct 35053 GCGCATAGCAAGGCAGCGCCCAATACACCGGCAACTCCCATCATATGAAATGGGTTCAAT 34994 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||| ||||| || || || | ||||| | ||||| |||||| ||||| |||||||| Sbjct 34993 GTCCAATTATGAAACCCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAA 34934 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 |||||||||||||||| ||||| || || ||||| || | || ||| |||||| Sbjct 34933 CTAGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAACAAAA 34874 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369 ||||| || || |||||||| || || ||||| || || || | | || | | ||| Sbjct 34873 ACAGCAATTGGACCAGAGAATGCGATGGCATTATAAGGCCGCAATTGAACAGATCGAGCA 34814 Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429 | |||||||||||| | ||||||||| || || | || || ||||||||||| |||||| Sbjct 34813 AGCTCGAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAAA 34754 Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489 | ||| || ||||| | ||| ||| | ||||||||||| |||||||||||||| Sbjct 34753 GTCCACAGACCCCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCAT 34694 Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549 |||| | | |||||| | | | | |||||| || || || || || || | |||| Sbjct 34693 AGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTCGAAACTGCGGCAGTTAAGAAA 34634 Query 102550 TTAGCACCTTCAAGGTA---ACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAAC 102606 || |||||| | || ||||| | | || ||||||||||| ||||| |||| Sbjct 34633 TTGCAACCTTCCAAATAGGAACTAGCC---AATCCATGGGTATACCATGAAGTTACAAAG 34577 Query 102607 GTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCA 102666 || || || || | ||| || || | |||| ||| ||| ||||| || | ||| || Sbjct 34576 GTTGTACCCGTGAACCAACCTCCTACAGCGAAATAGGCACAAGGAAAGAGCAATAGACCG 34517 Query 102667 GACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCA 102712 ||||| || ||||| || || || || | | ||||||||||| Sbjct 34516 GACCAGCCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCA 34471 >seq2762 Length=458829 Score = 536 bits (594), Expect = 2e-147 Identities = 724/1006 (72%), Gaps = 7/1006 (1%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| |||| || ||||||||| || ||||| Sbjct 60304 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 60363 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | |||||| || || || || || || |||||||| || Sbjct 60364 TGAGCGGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTT 60423 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| ||||| | ||| ||||| || || |||||||| ||||| ||| Sbjct 60424 TCAAATTCAGGATCTTCCGCTGCCC-GATTTCTTGAGAAACGAAGTCATAGGCACGTAGG 60482 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || || || ||||| | | || | ||| |||| | ||| | || || ||||| Sbjct 60483 TTCAGGGCCAGACCGACTACTCCAAGAACACTCATCCATAAACCGGTTACTGGTACAAAT 60542 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 | |||||||||||| ||||| | ||||| ||| |||| ||||||||||| ||||| Sbjct 60543 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 60602 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 || ||||| || ||||||||||||||||| ||||| ||| || | | || || | Sbjct 60603 AAGCGGTTAGCAGTAACCATTGAATAAGTTTCTTCAGATTGAGTTGGGTTAAAAGCGCGG 60662 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || ||||| |||||| |||||| | | ||| || || || || |||| || || Sbjct 60663 AATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATA 60722 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | |||| || | |||| | ||| ||||| ||||||||||| |||| ||| | Sbjct 60723 GCGCATAGCAAGGCAGCGCCCAATACACCGGCAACTCCCATCATATGAAATGAGTTCAAT 60782 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||| ||||| || || || | ||||| | ||||| |||||| ||||| |||||||| Sbjct 60783 GTCCAATTATGAAACCCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAA 60842 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 |||||||||||||||| ||||| || || ||||| || | || ||| |||||| Sbjct 60843 CTAGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAACAAAA 60902 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369 ||||| || || |||||||| || || ||||| || | || | | || | | ||| Sbjct 60903 ACAGCAATTGGACCAGAGAATGCGATGGCATTATAAAGCCGCAATTGAACAGATCGAGCA 60962 Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429 | |||||||||||| | ||||||||| || || | || || ||||||||||| |||||| Sbjct 60963 AGCTCGAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAAA 61022 Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489 | ||| || ||||| | ||| ||| | ||||||||||| |||||||||||||| Sbjct 61023 GTCCACAGACCCCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCAT 61082 Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549 |||| | | |||||| | | | | |||||| || || || || || || | |||| Sbjct 61083 AGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTCGAAACTGCGGCAGTTAAGAAA 61142 Query 102550 TTAGCACCTTC---AAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAAC 102606 || |||||| | | ||||| || | || ||||||||||| ||||| |||| Sbjct 61143 TTGCAACCTTCCAAATAGGAACTA---GCCAATCCATGGGTATACCATGAAGTTACAAAG 61199 Query 102607 GTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCA 102666 || || || || | ||| || || | |||| ||| ||| ||||| || | ||| || Sbjct 61200 GTTGTACCCGTGAACCAACCTCCTACAGCGAAATAGGCACAAGGAAAGAGCAATAGACCG 61259 Query 102667 GACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCA 102712 ||||| || ||||| || || || || | | ||||||||||| Sbjct 61260 GACCAGCCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCA 61305 >seq684 Length=2855409 Score = 295 bits (326), Expect = 8e-75 Identities = 390/540 (72%), Gaps = 6/540 (1%) Strand=Plus/Minus Query 102069 GAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGAT 102128 ||| || ||||| |||||| |||||| | | ||| || || || || |||| || || Sbjct 2854420 GAATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAAT 2854361 Query 102129 TGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAG 102188 || | |||| || | |||| | ||| ||||| ||||||||||| |||||||| | Sbjct 2854360 AGCGCATAGCAAGGCAGCGCCCAATACACCGGCAACTCCCATCATATGAAATGGGTTCAA 2854301 Query 102189 CGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAA 102248 ||||| ||||| || || || | ||||| | ||||| |||||| ||||| |||||||| Sbjct 2854300 TGTCCAATTATGAAACCCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAA 2854241 Query 102249 CGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAA 102308 |||||||||||||||| ||||| || || ||||| || | || ||| ||||| Sbjct 2854240 ACTAGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAACAAA 2854181 Query 102309 AACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGC 102368 |||||| || || |||||||| || || ||||| || || || | | || | | ||| Sbjct 2854180 AACAGCAATTGGACCAGAGAATGCGATGGCATTATAAGGCCGCAATTGAACAGATCGAGC 2854121 Query 102369 CAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAA 102428 | |||||||||||| | ||||||||| || || | || || ||||||||||| ||||| Sbjct 2854120 AAGCTCGAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAA 2854061 Query 102429 AGCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCA 102488 || ||| || ||||| | ||| ||| | ||||||||||| |||||||||||||| Sbjct 2854060 AGTCCACAGACCCCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 2854001 Query 102489 AAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAA 102548 |||| | | |||||| | | | | |||||| || || || || || || | ||| Sbjct 2854000 TAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTCGAAACTGCGGCAGTTAAGAA 2853941 Query 102549 ATTAGCACCTTCAAGGTA---ACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAA 102605 ||| |||||| | || ||||| | | || ||||||||||| ||||| |||| Sbjct 2853940 ATTGCAACCTTCCAAATAGGAACTAGCC---AATCCATGGGTATACCATGAAGTTACAAA 2853884 >seq2653 Length=4899193 Score = 244 bits (270), Expect = 1e-59 Identities = 293/395 (74%), Gaps = 11/395 (3%) Strand=Plus/Minus Query 103403 GAGTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACG 103462 ||||||||||| || ||||| |||||||| || || || ||||||||||| |||||| Sbjct 3225820 GAGTTGTTGAAACTAGCATATTGAAAGATCAATCGGCCAAAATAACCATGAGCAGCTACG 3225761 Query 103463 ATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCA 103522 || || || || ||||||||||| ||||| ||||||| | ||| | ||||| |||| Sbjct 3225760 ATATTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCATATTCATTTTCT 3225701 Query 103523 GTCGTCT-CACGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGA 103581 || || | | || | | | || | || |||| ||||| |||||||||||||| || || Sbjct 3225700 GTGGTTTCCTTGATCAAACTAGAAGTTACCAAG-GAACCATGCATAGCACTGAATAGGGA 3225642 Query 103582 ACCACCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCA--------TGAGAATG 103633 || ||||| || ||||| ||||| | ||| || || ||||||| | |||||| Sbjct 3225641 GCCGCCGAATACACCAGCTACGCCTAACATATGAAATGGGTGCATAAGAAATTAAGAATG 3225582 Query 103634 TTATGTTCGGCTTGGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATA 103693 || || | || ||||| || | |||| | ||||| || || || || || | ||||||| Sbjct 3225581 TTGTGCTTAGCCTGGAATACAATCATG-AATTGAAAGTACCAGAGATTCCTAGAGGCATA 3225523 Query 103694 GCATCGGAGAACGAACCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCA 103753 |||| || || || ||||| | ||||||| |||||| ||||||| ||||| ||| Sbjct 3225522 CCATCAGAAAAACTTCCCTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCA 3225463 Query 103754 ACAGGAGCAGAGTATGCGACACAGATCCAGGGGCG 103788 |||||||| |||||||| ||| ||||| | ||| Sbjct 3225462 ACAGGAGCTGAGTATGCAACAGCAATCCAAGAGCG 3225428 >seq1564 Length=1404973 Score = 226 bits (250), Expect = 4e-54 Identities = 284/385 (74%), Gaps = 6/385 (2%) Strand=Plus/Plus Query 103736 ACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCGACACAGATCCAGGGGCGCATGCCC 103795 ||||||| ||||| ||||||||||| |||||||| ||| ||||| |||||||| ||| Sbjct 140800 ACTGCGGTAGCAGCTGCAACAGGAGCTGAGTATGCAACAGCAATCCAAGGGCGCATACCC 140859 Query 103796 AGACGGTAGGACAATTCCCACTCACGTCCCATATATGCATAGATGCCAATGAGGAAGTGG 103855 |||||| | | |||||||||||| ||||| || | | |||| | |||||| Sbjct 140860 AGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGT 140919 Query 103856 AATACTACAAGTTGGAAAGGACCACCGTTATACAGCCACTCATCAAGAGATGCTGCTTCC 103915 | || | |||| ||||||| ||||| || | ||| ||||||| ||||| |||||| Sbjct 140920 AGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCATTCATCAACGGATGCCGCTTCC 140979 Query 103916 CAAATGGGATAGAAGTGAAGACCAATTGCGTTGGAGGAG--GGAACAACTGCACCAGAGA 103973 ||||| || || ||||| | || || || || || || |||| || |||||||||| Sbjct 140980 CAAATTGGGTAAAAGTGTAAACTTATAGC--TGCAGAAGTCGGAATAATAGCACCAGAGA 141037 Query 103974 TGATGTTGTTACCGTACATGAGTGAACCAGCGACGGGTTCACGAATGCCGTCGATATCGA 104033 | || ||||| ||||| | || || |||| || ||||||||||| || || ||||| | Sbjct 141038 TAATATTGTTCCCGTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTA 141097 Query 104034 CGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAGATGGTTGCCGCCAACAGAGTTGGG 104092 | ||||| || || | ||| || | || || |||| ||||| | ||| | ||| ||| Sbjct 141098 CTGGAGGAGCAGCAATGAAGGCTATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGG 141156 Query 104093 ATCATCAGCACACCGAACCAACCAA 104117 ||||||| ||||| ||||| |||| Sbjct 141157 ATCATCAAAACACCAAACCATCCAA 141181 >seq2647 Length=4788780 Score = 187 bits (206), Expect = 3e-42 Identities = 246/336 (73%), Gaps = 4/336 (1%) Strand=Plus/Plus Query 103403 GAGTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACG 103462 ||||||||||| || |||| ||||||||| || || || ||||||||| | ||||| Sbjct 734148 GAGTTGTTGAAACTAGCATATTAGAAGATCAATCGGCCAAAATAACCATGAACAACTACG 734207 Query 103463 ATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCA 103522 || || || | ||||||||||| ||||| |||||||| | ||| ||||||| ||| Sbjct 734208 ATATTATAAG-GTCTTCCTCTTGACCGAATTTGTAACCTTCGTTAGCAGATTCATTTTTT 734266 Query 103523 GTCGTCTCAC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGA 103581 | || || | || | | | || | || |||| ||||| |||||| ||||||| || || Sbjct 734267 TTGGTTTCCCTGATCAAACTAGAAATTACCAAG-GAACCATGCATAACACTGAATAGGGA 734325 Query 103582 ACCACCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTC 103641 || ||||| || | ||| ||||| | ||| ||||| |||||||| |||||||| || || Sbjct 734326 GCCGCCGAATACACTAGCTACGCCTATCATATGGAATGGGTGCATAAGAATGTTGTGCTC 734385 Query 103642 GGCTTGGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGA 103701 | ||||| || | |||| | ||||| || | || || || | ||||||| |||| || Sbjct 734386 AACCTGGAATACAATCATGAAATTGAAAGTACTAGAGATTCCTAGAGGCATACCATCAGA 734445 Query 103702 GAACGAACCTTGACCAAAGGGGTAGACCAAGAATAC 103737 || || || || | ||||||| ||||| || Sbjct 734446 AAAACTTCCCTGGCCGATTGGGTAGA-TAAGAAAAC 734480 Score = 109 bits (120), Expect = 7e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 103173 CAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGAC 103232 |||| ||||| || |||||||| |||| |||| || ||||| ||||||||||| || Sbjct 733597 CAGCTAGGTCTAGAGGGAAGTTACGAGCATTACATTCATGCATAACTTCCATACCAAGGT 733656 Query 103233 CAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATGG 103292 ||| |||| | | || ||||| || || | ||||| || |||| ||||| | | Sbjct 733657 TAGCATGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAATTACAG 733716 Query 103293 ACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCT 103335 | |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 733717 ATTGGTTGAAATTGAAACCGTTTAGGTTGAATGCCATAGTACT 733759 >seq3417 Length=265768 Score = 170 bits (188), Expect = 2e-37 Identities = 224/320 (70%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 103171 AGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAG 103230 |||||| ||||| || |||||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 155891 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 155950 Query 103231 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGAT 103290 ||| ||||| | | || ||||| || || | || || || || | ||||| | Sbjct 155951 GTTAGCACGGTTAATGATATCAGCCCAAGTCTTAATTACGCGGCCTTGGCTATCAACTAC 156010 Query 103291 GGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGT 103350 ||| |||||||| || | || || |||||||| ||||| ||||| | ||| | || || Sbjct 156011 GGATTGGTTGAAATTTCAACCATTTAGGTTGAATGCCATAGTGCTGATACCTAAAGCAGT 156070 Query 103351 GAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTT 103410 |||||||||||||||||| || | |||||||| Sbjct 156071 GAACCAGATACCCACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 156130 Query 103411 GAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTA 103470 ||| || |||||||||||||| || || || ||| |||||| |||||||| || || Sbjct 156131 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAATTATGAGCAGCTACGATATTATA 156190 Query 103471 TGTCTCTTCCTCTTGTCCGA 103490 || | ||||||||| |||| Sbjct 156191 AGTTTATTCCTCTTGACCGA 156210 >seq2833 Length=2661255 Score = 167 bits (184), Expect = 3e-36 Identities = 240/335 (72%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 102069 GAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGAT 102128 ||| || ||||| |||||| |||||| | | ||| || | || || |||| || || Sbjct 1209486 GAATGTATTTGCACCATCACCGTCTTCAAATAAAGTATTTTATACGGTAGCACCATGAAT 1209427 Query 102129 TGCTGACAGCAGTGCTCCTCCCAGGATAC-CTG-CAACACCCATCATATGGAATGGGTTG 102186 || | | || || | |||| |||| ||| |||| ||||||||||| |||||||| Sbjct 1209426 AGCGCATACCAAGGCAGCGCCCA--ATACACTGACAACTCCCATCATATGAAATGGGTTC 1209369 Query 102187 AGCGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCA 102246 | ||||| ||||| || || || | || || | ||||| |||||| ||||| |||||| Sbjct 1209368 AATGTCCAATTATGAAACCCTTGAAAAAAAAGGATGAATCGAAATATAGCTGCTACACCA 1209309 Query 102247 AACGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACA 102306 || ||||||||||||||| ||||| || || ||||| || | || ||| ||| Sbjct 1209308 AAACTAAGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAAGAATACAGAAACA 1209249 Query 102307 AAAACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTA 102366 |||||||| || | |||||||| || || |||| || || || | | || | | | Sbjct 1209248 AAAACAGCAATTGAACCAGAGAATGCGATGACATTATAAGGCCGCAATTGAACAGATCGA 1209189 Query 102367 GCCAACTCGAATTGACGAAGCATGAAACCAATGAG 102401 || | |||||||||||| | |||| |||| || || Sbjct 1209188 GCAAGCTCGAATTGACGTAACATGGAACCTATTAG 1209154 >seq1029 Length=16155 Score = 107 bits (118), Expect = 2e-18 Identities = 238/348 (68%), Gaps = 8/348 (2%) Strand=Plus/Plus Query 102148 CCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGCGTCCAGTTATGGAAGCCC 102207 |||| || ||| ||||| |||| || | | || ||| | | ||| | | || || Sbjct 11601 CCCAAGACACCGGCAACGCCCAGCAGAGGAAAGGGGGGCAAGGGCCAAGGAGGAAACCCG 11660 Query 102208 TGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAA-CGAGGGCGCAAAGAACCA 102266 | | ||||| ||||| | ||| | || || |||||||| ||||| |||||||||||| Sbjct 11661 GGAAAAAAGAGGAGGAAGCGAAAGAGAGCGGCGACACCAAAACGAGG-CGCAAAGAACCA 11719 Query 102267 ACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATAGGCCCAGA 102326 || ||| | ||||| ||| | | | || ||| ||||||||||| | || ||||| Sbjct 11720 ACCAGACGGACCGAGCGGAGAAAGCAAGAAGACAGAAACAAAAACAGCAAGGGGACCAGA 11779 Query 102327 GAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCCAACTCGAATTGACGAAG 102386 ||| || | ||| | || || | || | | ||| | | |||| |||| | Sbjct 11780 GAAGGCGAGGGCAGGAGAAGGCCGCAAGGGAACAGAGCGAGCAAGCGCGAAGGGACGGAA 11839 Query 102387 CATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCCCAGAGTCCCCC-AA 102445 || |||||| | |||| | || || ||| ||||||| ||||||| ||| || ||||| || Sbjct 11840 CAGGAAACCGAGGAGGCCGAAAGCGCCGGGGAGAGCAACAAAAGGCCACAGACCCCCGAA 11899 Query 102446 GTTGGAC-CCACCTGACG-AAATCTCCTTGAGCTTCAGGACCCCAAAG 102491 | |||| ||| | || | ||| | || | || |||||||||| || Sbjct 11900 G--GGACACCAAC-GAGGAAAAGCGCCGGGGGCGGCAGGACCCCAGAG 11944 >seq2036 Length=7432206 Score = 95.1 bits (104), Expect = 2e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 103556 GAACCGTGCATAGCACTGAACAGTGAACCACCGAAGACTCCAGCAACGCCCAGCATGTGG 103615 ||||| |||||||||||||| || | ||| |||| || ||||| || || ||||| || Sbjct 2690444 GAACCATGCATAGCACTGAATAGAGGGCCATCGAATACACCAGCTACACCTAGCATATGA 2690503 Query 103616 AAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAAGACCAGCATGTAGTTGAAGGTT 103672 || |||||| | |||||||| || | ||| ||||| || | |||| | ||||| ||| Sbjct 2690504 AATGGGTGCGTAAGAATGTTGTGCTTGGCCTGGAATACAATCATGAAATTGAAAGTT 2690560 >seq3267 Length=437453 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 102814 ATCCGAAGTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCATC 102873 ||| || || ||||| || || || ||||| | | | || |||| | ||| ||||| Sbjct 287866 ATCTGAGGTCGGGTAAGCGACACAAGTCAGCAAATATCCCTCTTCCATTTGGCTATCATC 287807 Query 102874 CAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAGA 102933 ||||| ||| ||| |||||| |||| ||| || | ||||| ||||||||||| | Sbjct 287806 AAGAAACGATCCATCAGATTGATCAACAGAACCGGACGCGATCTTCCCAGCACAAGTGCA 287747 Query 102934 ACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTAG 102993 || |||||||| | || ||||| ||||| || | ||||| | || |||| ||| || Sbjct 287746 GCATGCACCAGCCCTGCAAGAATAGGGCAGGTCCATCCCTGCCGCCTCTGCAGAGTCCAG 287687 Query 102994 AATATA 102999 || || Sbjct 287686 GATGTA 287681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633486533131440